| Id Trinity | FTRINITY_DN57983_c5_g1_i25 |
|---|---|
| Name Transcript | Ll_transcript_259077 |
| Sequence | CTGCAATTGTCCCCTCTCTCTCTCTCTTCTAATTCTACGTTCAGGTTTTAAGTTATGCAATTGTTGAGTGTGTGCTGAAAGAATAAGGTATTGGGAAATT GAATTTCTATCAAGTTTGTTTAGTGATGGAACACAACTTATTAGAGGAGCTTGTGGGTTCAGAGATACATGGCTTCCACAAATTGCATGAGCTGGATGTT CAGAACACTATGGAAGAAGCAAAAAGCCGATGGCTACGCCCTAATGAGATTCATGCCATACTCTGTAATCCCAAGTACTTCACGATCCGTGTCAAGCCAG TGCATTTGCCCAAAAGTGGCACTATTGTATTATTTGATCGCAAGGTGCTTAGAAACTTTCGAAAAGATGGGCACAATTGGAAAAAGAAAAATGATGGAAA AACTGTTAAAGAGGCTCATGAGCACTTAAAAGTTGGTACTGAAGAAAGGATCCATGTATATTATGCCCATGGACAAGATAACCCGAGCTTTGTTCGTAGA TGTTATTGGTTGCTTGATAAGAGTCTGGAGCATGTAGTCCTTGTTCATTATCGTGAAACACAGGAGTTGCAAGGTTCTCCTGTCACACCTGTATATTCAA ATTCAAGTTCTACCTCTGATCCAACCGCACCTTCGATTTTACCGGAAGGCTTAGATTCTGGGACCAACATTGCTTATGCTGATGGTGAGAAACAACTTTT ATCAAATTATTCCTACAAGTTATACACTTGAGGCTATCAACATGAAAAACTTAACATTTCTTTGAGACTGGATTTTGATAAAGATTTTAATGGTTTTTTT TTATGAAAAATGGAGGACTATAATTACTTGAGAGAAAAGAACATGTCTGATGAGCATGTCTTTATACAATGGACATTTTCATTCCTCCTTTTTTGTCTTC TCTCAATCTTTCCAAATGAATCTGTAAATAAGAGTCTTTTTGTTTGTTAGTAATGATATATGCATTTGGTTACTGTTTTCTCAGTCATGGGTACTGTAGC TTTATAATTTTTACTTGGTATGCAAGTTATAATCCTTTTCTGTTTTGGAGATAAACAGGGCTTAATGACAATTTAACAGTCAAAAGTCACGAAATAAGAC TTCATGAGCTTAACACACTTGAATGGGATGACTTAGTGGCTTCAAATAATGACATCTCTACAAAACCTGCTGAAGCCAATATTCCATGTTTGCATCAACA AAATCAAAGTTTACTCAATGGAAGCTTTGGCCATGTAGCAAGCAATCCTTCTGCAGAAGGTCGTTCTTTTGATAATTCAACACAGCCAATTTCTGGGAGA AATTGTGTTCCGTACGGTTTTCAAGAAATTGTTAACGTTCAAAAGGATTCTCCTATATCTTTGGGTGGTGTTGATTCCTTAGACACTTTGGTCAACGGGG GCTTGCAAAGTCAGGACAGCTTCGGGAAGTGGATAAATGACATCATATTGGATTCACCATGTTCTGCAGATGAGTCTGCTCTCAAATCCTCCATTTCTTC ATCCGTTCAGAAACCAAATTCATCACTTGGGGTGGATAATCAGAAATCTTCTCTGCCAGAGCAAGTACTTAATATCACTGAGGTGTCTCCTGCATGGGCA TCTTCCACTGAGAAGACAAAGGTCTTGATAACTGGATTATTTCATAATGATTATCAATCACTTGAAAAGTCCAATCTACTATGTGTCTGTGGTGATGTAA GTGTTCCTTTAGAAATTGTTCAGGTTGGAGTTTACCGATGCTGGGTATCACCACATTCTCCTGGATTTGTGAGTCTCTATATGAGCTTGGATGGCCATAA GCCTATTAGCCAAGTTGTTAATTTTGAGTATCGCACTCCTGTTTTGCATGATCCTGCCGCTTATATGGAAGAGAAACACAACCGTGAAGAGTTTCGACTC CAGATGAGACTTGCTCATTTGCTCTTTACTACACAAAGGAGCCTTGATATTTTCTCTAGTAAAGTATCACCTAATGCACTGGAATATGCTAGGAAGTTTG TCTCCAAAACATCGTTCATGGCCAACAGTTGGCAATACTTGATGAAATCAATCGATGACAATACAATTCCATTTTTACAAGCAAAAAATGACTTGTTTGA AATTTCATTGAGAAATAGACTAAAGGAATGGCTTTTGGAGCGAATTGTCATAGGCAATACTACCGAATATGATGCACAAGGCCAAGGTGTAATCCATTTA TGTGCAATTCTGGGTTATACTTGGGCTGTGTCCTTATTTTCATGGTCAGGCCTGACGCTGGATTTTCGTGACAAATTTGGATGGACAGCTCTTCATTGGG CAGCATATTATGGAAGGGAGAAGATGGTTGCAACTTTGTTGTCATCTGGGGCTAAGCCAAACTTGGTCACGGATCCAACTCCACAAAATCCTGGTGGATG TACTGCTGCTGATCTTGCTTATGTGAAGGGATATGATGGCTTAGCAGCATATCTTTCAGAAAAATCTTTGGTTGAACAATTCAATGACATGAGCTTAGCT GGAAATATCAGTGGCTCGCTGGAAACTAGCACAAATGATCCAGTAAAATCTGAAAACCTTACTGAGGACCAGCTGTACATGAAGGAAACATTGGCAGCTT ACCGAATAACTGCTGAGGCAGCAGCACGTATACAAGCTGCATTTAGGGAGCACTCGCTAAAATTGCGATCACAGGCGATTGAATTTCTCAATCCAGAGGA TGAAGCACGCCATATAGTAGCAGCAATGAAGATTCAGCATGCCTTTCGCAACTTCGAGAGTAGGAAAATGATGGCAGCTGCTGCTCGGATCCAACACAGA TTCCGTGGGTGGAAGCTCCGTAGAGAATTTCTCCACATGAGACGTCAGGCTATTATAATTCAAGCTGCTTTCAGGGGATTTCAAGTGCGGAGGCAATATT GCAAAATTATTTGGTCTGTTGGAGTGCTCGAGAAAGCAATCCTGCGTTGGCGTCTAAAGAGAAAAGGCTTCCGTGGCCTCCAGGTTAGCCCTGTTCAAGA A BLAST |
| Tissue | flowers |
| Gene name | LI_gene_73283; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_259077
| Blastp | Calmodulin-binding transcription activator 5 from Arabidopsis with 64.1% of identity |
|---|---|
| Blastx | Calmodulin-binding transcription activator 5 from Arabidopsis with 55.46% of identity |
| Eggnog | Transcription activator(ENOG410XS5M) |
| Kegg | Link to kegg annotations (AT4G15200) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019418803.1) |
| Pfam | Ankyrin repeats (3 copies) (PF12796.6) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |