Ll_transcript_260252

• Id Trinity: FTRINITY_DN57996_c1_g2_i14
• Name Transcript: Ll_transcript_260252
• Sequence: ATTTTCTGTTCTGCAACAATATTTGTTGATGTCTGCAAATTGCAAATAGTGTAGACTGGTAGAGAGTTAGTCACAAAAATGGATAAGGTCAAAGCCACAA ATTTAGAAACAAAAAAAAAACAAGCATGTGAAGTCCTAAAACTGCATAATCACATATTTGACGCATGACCATTAGTCCATTACCCACTGCATCAAAAAAG AACACAAACAAGTGTGTGTTGTGTATAATTGTTTTATGTATTTACTTTTTTTGTGGTATTTGTGTTAGCATCTTCTTTTCTTAACCGAGAAACACTCTTA AACATTATCTTTTAGCTCAATCCACTCTTCTCCTCCCTTCACTTTCTCTCTCTTCTATCTTTATTCTTCCTCAATTCATTAATAAATTCCCACAATCCAA ATCACTCTTTTACATCTAAAGTTATTCTTTTTTCTCAATTGGGTCAATGAAACAAATCCATTTTTCTCCATAACACTACTCTACAATACTCAATTTTGCA TCTCAAAGTTACCATTTTTATTTTTTTCTTTATTTTTTCAGAATTCTATAACCATGTCTAGAATCTTCTCAAGATGGAAGAAGGTGAAGGAAATGGCATC ACTGTCAGATACCCATTTGGCTATTTACTCGAATAATCGTTGCATGAACCGAACTGGGTTCAAATTCAACCAGATGCGTCCAATCTCAACCCACCTGAAG AATTCCAACCTCCACACTATCGCTGCCCATCGCCGCCGTGAACCGCTCATCGGAGTTCAGGAGCGGTACAAGTCGGACCGTGGTGGCTCGGGCGATATCA GCAGCCCGGCACGGAGGATTCGGGCAGAGGCGAATTGCCCACGTTGCACCAAAGATATGAACCTCATATTCTCCAGTAACCATTTTCCACCTTCTGATTC AAATTCAGGTTCTGAATCTTTTGATTCCAATTTAGCATCACCATCAATAAGTGAAGAGGGTAGTGGTTACCAATCTGTGAATATTTGCCCAAGTTGCAAA AGTGCTTATCACTTTAGGCCTAACAACACTGCACCTTTGCAAGGTACATTTGTGGAGATTGGAAGGGGCAGTAATAGTAACACTAACAGTGTTGCTAAGA GTGGGGGTAGTAAAATTCCTAGGAGAATCACACATGGTAAAGGTAGTAGTAGTGGTAAAAATGGTATTAGTGGTAATTGGCTTGAAGTGGCAACATGGGA CAATATAAGATCAGCTAAAATTAATGGTCATAATGGGGAGCCACCTGAGGATTGGCCTCCACCACCACCACCAATTGGTAATGATGGGAATGGGAATGGT TTGGCTGTGCATAATCCTCCAGGCCCATCTTTTGCACCTGGGGTTAATGTTATTCGGCATACCGGGCTGAGGGACGGCCGCGCGGGTGGCGGTGGAGGTG GAAGCAATGGAGAGAAGACTACTTGGGGAGGGTCTAATTTGGGGAAGGATTTGCCATCCCCAAAGGAGATCTGCAAGGGTCTTGACAAGTTTGTTATTGG CCAAGACAGAGCCAAAAAGGTGCTTTCTGTAGCTGTATATAACCACTACAAGCGAATATACCATGCCACTTTGCAGAAAGGGTCAGGACCAGATTCAGGA ATTTTAGAAGGATTTGATGATGACGATAATGTGGAGCTAGAAAAGAGTAATGTTCTCTTGATGGGTCCAACAGGGTCAGGGAAGACATTACTTGCGAAAA CACTAGCTCGATTTGTGAATGTTCCATTTATCATCGCTGATGCAACAACCTTAACACAGGCAGGTTATGTTGGTGAAGATGTCGAATCGATATTGTACAA ACTTCTTGCGGCAGCAGATTTCAATGTTGCAGCAGCTCAACAAGGGATAATTTACATTGATGAAGTTGACAAGATAATTAAGAAGGCTGAGAGCTTAAAT ATCAGTCGGGATGTTTCTGGTGAGGGTGTTCAGCAGGCATTATTAAAAATGCTGGAAGGAACTATAGTAAATGTTCCTGAGAAAGGAGCAAGGAAGAATC CACGTGGAGATAGCATACAGATGGACACAAAAAATATTCTTTTTATATGTGGTGGAGCATTTATTGATCTTGAAAAAACAATTTCGGAGAGACGACAAGA TTCTTCTATTGGTTTTGGAGCACCAGTTCGTGCCAATATGAGAGCTGGAGGACTGACAGATTCGGCAGTAGTATCATCTTTACTTGAGTCGGTGGAAAGT TCTGATCTTATTGCATATGGCCTCATACCAGAGTTTATTGGACGATTTCCCATCTTAGTCAGCCTGTCAGCTTTAACTGAAGATCAACTTATGCTGGTCC TTACAGAGCCGAAAAATGCTCTTAGTAAGCAGTACAAGAAATTATTTAGCATGAATAATGTTAAGCTATACTTCACAGAGAAAGCTCTAAGATTAATTGC GAAGAAAGCTATGGCCAAAAATACTGGTGCCAGGGGTTTAAGAGCCCTATTGGAAAGCATTTTAACCGAAGCCATGTTTGAGATTCCCGATATTAAGACA GGAACTGACCGGGTCGACGCAGTTGTTGTTGATGAAGAGTCAGTAGGATCCGTAGATGCCCCGGGATGTGGAGGAAAAATTCTTCGTGGAGATGGTGCTC TGAAGCAGTACATAGCTAAGATCAAGGATTCAATGGTTAATGTTGAGGTAGCAGAAACAGAGTTACAAGAGGGGGATTCAGAGCTTTCATCAAGAGCCAT GAGTATGTAGTTTTATTATATTTACCATATTCAGTGTAGAATTTACCATTTTCATTGTTATTTGTAAAGATGATCACATTCAAAATTTGCTGTAATTATC CCTTGTATAACAGCAGCATAGTTACTGCCATAGGGTCACTTGATAAAAAGGAAATATAATAAAAGGAAGGTTTAGTGTAGCATTGCTAACTTAAACAAAG ATTGAATGGTTTTTGAGGAATTATGGTTTAAGC
• Tissue: flowers
• Gene name: LI_gene_73388;
• Additional information: details;

Expression of Ll_transcript_260252

FPKM

• FPAB: 3.5
• FPNAB: 3.4
• LF1: 5.6
• LF2: 3.4
• LF3: 3.6
• LF4: 3.2
• UF1: 4.1
• UF2: 4.4
• UF3: 3.2
• UF4: 2.6

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_260252

• Blastp: CLP protease regulatory subunit CLPX3, mitochondrial from Arabidopsis with 58.88% of identity
• Blastx: CLP protease regulatory subunit CLPX1, mitochondrial from Arabidopsis with 75.7% of identity
• Eggnog: ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP (By similarity)(COG1219)
• Kegg: Link to kegg annotations (AT1G33360)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019449440.1)
• Pfam: AAA domain (Cdc48 subfamily) (PF07724.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;