Ll_transcript_260231

• Id Trinity: FTRINITY_DN57996_c1_g2_i3
• Name Transcript: Ll_transcript_260231
• Sequence: ATTTTCTGTTCTGCAACAATATTTGTTGATGTCTGCAAATTGCAAATAGTGTAGACTGGTAGAGAGTTAGTCACAAAAATGGATAAGGTCAAAGCCACAA ATTTAGAAACAAAAAAAAAACAAGCATGTGAAGTCCTAAAACTGCATAATCACATATTTGACGCATGACCATTAGTCCATTACCCACTGCATCAAAAAAG AACACAAACAAGTGTGTGTTGTGTATAATTGTTTTATGTATTTACTTTTTTTGTGGTATTTGTGTTAGCATCTTCTTTTCTTAACCGAGAAACACTCTTA AACATTATCTTTTAGCTCAATCCACTCTTCTCCTCCCTTCACTTTCTCTCTCTTCTATCTTTATTCTTCCTCAATTCATTAATAAATTCCCACAATCCAA ATCACTCTTTTACATCTAAAGTTATTCTTTTTTCTCAATTGGGTCAATGAAACAAATCCATTTTTCTCCATAACACTACTCTACAATACTCAATTTTGCA TCTCAAAGTTACCATTTTTATTTTTTTCTTTATTTTTTCAGAATTCTATAACCATGTCTAGAATCTTCTCAAGATGGAAGAAGGTGAAGGAAATGGCATC ACTGTCAGATACCCATTTGGCTATTTACTCGAATAATCGTTGCATGAACCGAACTGGGTTCAAATTCAACCAGATGCGTCCAATCTCAACCCACCTGAAG AATTCCAACCTCCACACTATCGCTGCCCATCGCCGCCGTGAACCGCTCATCGGAGTTCAGGAGCGGTACAAGTCGGACCGTGGTGGCTCGGGCGATATCA GCAGCCCGGCACGGAGGATTCGGGCAGAGGCGAATTGCCCACGTTGCACCAAAGATATGAACCTCATATTCTCCAGTAACCATTTTCCACCTTCTGATTC AAATTCAGGTTCTGAATCTTTTGATTCCAATTTAGCATCACCATCAATAAGTGAAGAGGGTAGTGGTTACCAATCTGTGAATATTTGCCCAAGTTGCAAA AGTGCTTATCACTTTAGGCCTAACAACACTGCACCTTTGCAAGGTACATTTGTGGAGATTGGAAGGGGCAGTAATAGTAACACTAACAGTGTTGCTAAGA GTGGGGGTAGTAAAATTCCTAGGAGAATCACACATGGTAAAGGTAGTAGTAGTGGTAAAAATGGTATTAGTGGTAATTGGCTTGAAGTGGCAACATGGGA CAATATAAGATCAGCTAAAATTAATGGTCATAATGGGGAGCCACCTGAGGATTGGCCTCCACCACCACCACCAATTGGTAATGATGGGAATGGGAATGGT TTGGCTGTGCATAATCCTCCAGGCCCATCTTTTGCACCTGGGGTTAATGTTATTCGGCATACCGGGCTGAGGGACGGCCGCGCGGGTGGCGGTGGAGGTG GAAGCAATGGAGAGAAGACTACTTGGGGAGGGTCTAATTTGGGGAAGGATTTGCCATCCCCAAAGGAGATCTGCAAGGGTCTTGACAAGTTTGTTATTGG CCAAGACAGAGCCAAAAAGGTGCTTTCTGTAGCTGTATATAACCACTACAAGCGAATATACCATGCCACTTTGCAGAAAGGGTCAGGACCAGATTCAGGA ATTTTAGAAGGATTTGATGATGACGATAATGTGGAGCTAGAAAAGAGTAATGTTCTCTTGATGGGTCCAACAGGGTCAGGGAAGACATTACTTGCAAAAA CACTAGCTCGATTTGTGAATGTTCCTTTTGTCATTGCCGATGCGACAACCTTAACACAGGCTGGTTATGTTGGAGAAGATGTTGAATCAATACTCTACAA ACTTCTTGCAGCAGCAGATTTCAATGTTGCAGCAGCTCAACAAGGGATAATTTACATTGATGAAGTTGACAAGATAATTAAGAAGGCTGAGAGCTTAAAT ATCAGTCGCGATGTTTCTGGCGAGGGTGTTCAACAGGCATTATTAAAAATGCTGGAAGGAACGATAGTAAACGTTCCTGAGAAAGGAGCAAGGAAGAATC CACGAGGAGATAATATACAGATGGACACAAAGAACATTCTTTTTATATGTGGTGGAGCATTTATTGATCTTGAAAAAACGATTTCAGAGCGACGACAAGA TTCTTCTATTGGTTTTGGAGCACCAGTTCGTGCCAATATGAGAGCTGGAGGACTGACAGATTCGGCAGTAGTATCATCTTTACTTGAGTCGGTGAGACTT GACTTCTGAATGGAAATTTTATTTTTCTTTTTAATTTTTAACAAGACTAGAGAGATTCGTATATTAAAGCAATTGAAGCTAGCGTACTGTGTGTTTTTCC AAACCTTCCAGCACCAGCAAAAAAACACAGAAGTGAGGTTATGAAATTGTTATACCTAACAACATGCAAATGTGTCAAAAAGTGGAATTTAATAATTTTC AGGTGGAAAGTTCTGATCTTATTGCATATGGCCTCATACCAGAGTTTATTGGACGATTTCCCATCTTAGTCAGCCTGTCAGCTTTAACTGAAGATCAACT TATGCTGGTCCTTACAGAGCCGAAAAATGCTCTTAGTAAGCAGTACAAGAAATTATTTAGCATGAATAATGTTAAGCTATACTTCACAGAGAAAGCTCTA AGATTAATTGCGAAGAAAGCTATGGCCAAAAATACTGGTGCCAGGGGTTTAAGAGCCCTATTGGAAAGCATTTTAACCGAAGCCATGTTTGAGATTCCAG ATGTTAAGGAAGGAAATGAACAGATAGATGCAGTTGTTGTTGATGAGGAGTCAGTAGGATCAGCAGATGCCCCTGGCTGTGGAGGAAAAATTCTTCGTGG CCGTGGCGCTCTGGAGCGATACCTAGCTAAGATGGAGGATTCAATAGTTAACAGTGATGGAGCTGAATCTGACTTGCAAGAAGGGGAACCAGAGATTTCA TCAAGAGCCATGAGCATGTAATATTACATTTAACCATAACCAAGATATACCATGTATCATTGTCATTGTTTGTAAAATTACATTCATAATTCACTGTAAT TATCCCTTGTATAAGAGCATACCCGTTTAAGTTCATTGGATAGGAAAATGAAAAATGTAACATATTTAGGCAACACATGGTACAAAATTGTATTTGATTT CATTAGGAAGGTTTAATTATAACCAATTTTCTCTTCTTCTGTTGCCACCACTGACATCAAAGATCAATATCTGAAAGCAATGACTGAT
• Tissue: flowers
• Gene name: LI_gene_73388;
• Additional information: details;

Expression of Ll_transcript_260231

FPKM

• FPAB: 1.4
• FPNAB: 1.4
• LF1: 0.8
• LF2: 0.9
• LF3: 0.8
• LF4: 0.8
• UF1: 0.8
• UF2: 0.9
• UF3: 0.7
• UF4: 0.8

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_260231

• Blastp: CLP protease regulatory subunit CLPX3, mitochondrial from Arabidopsis with 54.32% of identity
• Blastx: CLP protease regulatory subunit CLPX1, mitochondrial from Arabidopsis with 84.31% of identity
• Eggnog: ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP (By similarity)(COG1219)
• Kegg: Link to kegg annotations (AT1G33360)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019449440.1)
• Pfam: AAA domain (Cdc48 subfamily) (PF07724.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;