Ll_transcript_260240

• Id Trinity: FTRINITY_DN57996_c1_g2_i8
• Name Transcript: Ll_transcript_260240
• Sequence: CGAAAACCAAAAAAAATAATATTTATTAACACACTTTCTCTCTCTTCTCCCTTTCTTCTACCTCACTTCATCAATAAATACCCCACAATCCAAATCACTA TTTCAGATCGAAATTTATTCTCTTTTCTCAATTGGGTCATCGATCAAATCCCATTTTCTCCATAACACTACTGTAGAATAAATACTAAATCTGCTTTTCT TATACCCCAAAATTCCCATTTTTATTTATTCTTCAACTTTTTTCCGATCAGAATTCTTCACCCATGTCTAGAATCTTCTCAAGATGGAAGAAAGTGAAGG AAATGCCATCACTTTCAGATACCCACTTCGCTTTTTCCTTGAATAATCGTTGCCTGAACCGAACCGGGTTCAAATTCAACCAAGTGTGTCCAATCTCGAC CCACCTGAAGAATTACAAACTCCACATTATCTCCGCCCATCGCCGCCGTGAACCGCTCGTCGGCGTCCAGGAGCGGTACAAGTGGGATCGGAGTGGCTCC GATGACATCGTCAACCCGACCCGGAAGATTCGGGTCGAGTCGAATTGTCCACGTTGCACCAAAGACATGAACCTCATATTCTCCAATAACCATTTTCCAC CTCCAGATTCAAATTCAGGTTTTGAATCTTTTGATTCCAATTTAGCATCACCAATTGAAACTGAAGATGGTGGTGGTTATCAATCTGTGAATATTTGCCC AAATTGTAAAAGTGCTTATCACTTTAGACCTAATAGCACTGCACCTTTGCAAGGTACATTTGTGGAGATTGGAAGGGGCAGTGATAATAACAATAGTATT GTTAAGAGTAGGAATAGTAAAGTTCCTAGGAGGATCACACATAGTAAAGGTAGTAGTAGTAGTAGTGGTAAAAGTGGTAGTGTTGTGGGTGGGGATTATG AGCTTAAAAGGGCTAGTAATTGGCTTGAAGTGACAGTGTGGGATAATATAAGATCAGCCAAAGTTACTGGTCATGATAATGGGGAGCCACCCGAGAGTTG TCCGCCACCACCACCGGGTGGTAATGATGGGAATGGTTTGGCTGTGCATAATCCTCCAGGCCCACCTTTTGTACCCGGGGTTAATGTTATCCGGCATACC GGGCCGAGGGAAGGTGGTGCTGGCAGCGGAAGAGGAGGTGAGGGAAATGGAGAGAAGACTACTTGGGGAGGGTCTAATTTGGGGAAGGATTTGCCCTCTC CAAAGGAGATCTGCAAGGGTCTTGACAAGTTTGTTATTGGCCAAGACAGAGCCAAAAAGGTGCTTTCTGTAGCTGTATATAACCACTACAAGCGAATATA CCATGCCACTTTGCAGAAAGGGTCAGGACCAGATTCAGGAATTTTAGAAGGATTTGATGATGACGATAATGTGGAGCTAGAAAAGAGTAATGTTCTCTTG ATGGGTCCAACAGGGTCAGGGAAGACATTACTTGCAAAAACACTAGCTCGATTTGTGAATGTTCCTTTTGTCATTGCCGATGCGACAACCTTAACACAGG CTGGTTATGTTGGAGAAGATGTTGAATCAATACTCTACAAACTTCTTGCAGCAGCAGATTTCAATGTTGCAGCAGCTCAACAAGGGATAATTTACATTGA TGAAGTTGACAAGATAATTAAGAAGGCTGAGAGCTTAAATATCAGTCGCGATGTTTCTGGCGAGGGTGTTCAACAGGCATTATTAAAAATGCTGGAAGGA ACGATAGTAAACGTTCCTGAGAAAGGAGCAAGGAAGAATCCACGAGGAGATAATATACAGATGGACACAAAGAACATTCTTTTTATATGTGGTGGAGCAT TTATTGATCTTGAAAAAACGATTTCAGAGCGACGACAAGATTCTTCTATTGGTTTTGGAGCACCAGTTCGTGCAAATATGAGAGCTGGTGGAGTAACAGA TTCAGCTGTAACATCATCTTTACTTGAGTCGGTGGAAAGTGCTGATCTTATTGCATATGGCCTCATACCAGAGTTTATTGGAAGATTTCCCATTTTAGTC AGCTTGTCAGCTTTAACTGAAGACCAACTTATGCTGGTCCTCACAGAACCAAAAAATGCACTTGGTAAGCAGTACAAGAAATTATTTAGCATGAATAATG TAAGCAGCTCCTGTTCTCCCTTGCTCTCTTTCTCTCTCTCCCTCTGTGTGTTGTGCGCACACATGTGTGTGCACGGCTGTGAACCTCACTCTGTCTGTGT TGTGAAAACCTGAACCCGCCTGGCCATTGCCAGGTCCGGATAATCCCATTCCAACAAAATTTGGGCATATGGAGATGCAAATCTTTAAATAGATTCAAGT GATTAGTTTAATGGTTGTGTATGGTATACCATTTCTAATAATGATTCCTGACTTAGTATATCTTATTTCAAATTTTTATATAATTTATTGGTTGCAGTCT CCTTCTCATCCTCTTGCCTTCTTATATTCATATGACACCAAAGAATCCCTTAATCTTTCCTTATTTTACCTTCATGTGATTTGTTGAATTGACTGTAGCC TTCCTTGAAGCCACTTCCTGGTGATATCTTTTACCATTGTACTTTTGAACACGACTTATAAACCCGATGAAGACCGACCTTGAATGATTTGGTTTGTTAC TTCTTTGGAGCCATTTGGTATTGGTCTTTTCTAGGTCAAAACTGGTTAACTTGTATAGGATTTTTTGTGCAAATCACTCAAATTGCCATGTCTGTCCATG TGTATGTTCATTTGTTTATTGCTGAATATTTACGTCTACACTGCAGGTAAAGCTATACTTTACAGAGAAAGCTCTAAGACTGATTGCAAACAAAGCTATG GCCAAAAATACTGGCGCCCGGGGTTTAAGAGCCCTACTCGAAAGCATTTTAACCGAAGCCATGTTTGAGATTCCCGATATTAAGACAGGAACTGACCGGG TCGACGCAGTTGTTGTTGATGAAGAGTCAGTAGGATCCGTAGATGCCCCGGGATGTGGAGGAAAAATTCTTCGTGGAGATGGTGCTCTGAAGCAGTACAT AGCTAAGATCAAGGATTCAATGGTACGATCTTTTATTAGAGTATGTTCCAGCTAGTTTGTTAGGTTGGTTTTTGCAAATTGATGTTAGTATTGCAATAAT AAGAACTACATTGACCTCACTCAATTACACTCAACATATCTGTTGGTTCCAGCTAAACTCACCTCCCCTTATCCGGTTATCATGATTAAAAGTGAGTGTA ACTTTTCAAACGAGGGTATTATCGAGTGTAATTAAGCTAAACTTCAGGAGAGGTTAGTGCGATTTCTCTTAATAACAGCGTATCAAACGAACGGGTTTTC ACCTATGCATAGACATGGAGTATGTTACTTTGTAAGGTCCTGCTGATAGTATATTCCCTATTGGAGATGTTTTCTTTCATTTACAGCATTTTATGATCCA TGAAGATATATAGTAGGTAGTTTTGAACCATTTTGCATAACCTTTTGTAGGTTAATGTTGAGGTAGTCGAAA
• Tissue: flowers
• Gene name: LI_gene_73388;
• Additional information: details;

Expression of Ll_transcript_260240

FPKM

• FPAB: 0.5
• FPNAB: 0.4
• LF1: 0.4
• LF2: 0.2
• LF3: 0.2
• LF4: 0.3
• UF1: 0.4
• UF2: 0.5
• UF3: 0.3
• UF4: 0.2

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_260240

• Blastp: CLP protease regulatory subunit CLPX3, mitochondrial from Arabidopsis with 57.96% of identity
• Blastx: CLP protease regulatory subunit CLPX1, mitochondrial from Arabidopsis with 84.71% of identity
• Eggnog: ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP (By similarity)(COG1219)
• Kegg: Link to kegg annotations (AT1G33360)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019453239.1)
• Pfam: AAA domain (Cdc48 subfamily) (PF07724.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;