| Id Trinity | FTRINITY_DN57998_c1_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_258609 |
| Sequence | GTTTTTCTTGCTCTCTCCTATCTTCTCCTCTTGCTGCGTTTTTTCTAGGGTAACACCAACTACGTTGCGCCACTCCAAACAACAACTGCGCCACATTCTC TTCTCAGAGTGTTTGGTGAATCGCCAATATGAGTCAATTCCTGAAGCCTGAGAATGCCCTCAAAAGGGCAGAAGAATTGATCAATGTTGGGCAGAAGCAA GATGCTTTGCAGACTCTTCATGACCTAATCACTTCAAAAAGATACCGAGCATGGCAGAAGACACTCGAAAGGATCATGTTCAAGTACGTCGAGCTGTGTG TTGAAATGCGTAAAGGGCGGTATGCGAAGGATGGGCTCATTCAGTATCGTATCATATGTCAGCAAGTTAATGTTGGTTCTCTGGAAGAGGTGATCAAGCA TTACATTCACCTCTCGACTGAGAAAGCTGAAAAGGCCCGCAGCCAGGCACAGGAGTTGGAAGATGCTCTCGATGTTGATGATTTAGAGGCAGATAAAAAG CCTGAGGACCTGATGCTCAGCTACGTCAGCGGCGAAAAGGGGAAAGAAAGATCTGACCGTGAGCTTGTTACTCCATGGTTTAAGTTTCTTTGGGAAACAT ACAGGACAGTTCTTGAAATTTTGCGAAACAACTCCAAATTGGAAGCCCTATATGCTATGACAGCTCATCGAGCTTTCCAGTTCTGTAAGCAATATAAGCG AACGACTGAGTTCCGCAGACTTTGTGAAATCATAAGAAACCACTTGGCCAATCTGAATAAATACCGTGACCAACGGGACCGACCTGATCTTTCTGCTCCT GAAAGCTTGCAACTGTATCTTGATACAAGATTTGAGCAGCTGAAAATTGCAACTGAACTTGAACTCTGGCAGGAAGCTTTTCGGTCAGTTGAAGATATAC ATGGCCTAATGTGCTTGGTCAAGAAAACGCCGAAATCGTCATTGATGGTCGTTTACTATGCTAAGCTGACCGATATATTTTGGATATCATCAAGTCATTT ATATCATGCATATGCATGGTTCAGGCTCTTTTTATTACAAAGGAGCTTCAATAAGAATCTGAGTCAGAAGGATTTGCAATTGATAGCTTCATCTGTTGTT CTGGCTGCACTTTCGGTTCCTCCTCATGATCACACTCATGGTGCATCTCATTTTGAACTGGAGCATGAGAAGGAGAGAAATTTCAGGATGGCTAACCTGA TCGGCTTTAATCTTGAAACCAAATCTGAAAGCAGAGAAGTGCTTTCCAGGTCATCGCTTCTTGCTGAACTGGCTTCCAAGGGTGTCATGTCTTGTGTAAC TCAGGAAGTGAAGGACATTTACCATCTTCTGGAACACGAATTTCTTCCGTCAGATCTTGCATTAAAAGTGCAGCCATTGTTAACCAAAATCTCGAAGTTA GGGGGTAAGCTTTCCACTGCTTCATCTGTCCCAGAGGTGCAACTGTCTCAGTATGTCTCGGCACTGGAGAAACTGTCTACCTTGAGGTTGCTACAGCAGG TGTCTAATGTGTATCAGACAATGAAGATCGAGACTTTATCTGGGATGATCCCCTTCTTTGATTTTTCTGTAGTGGAAAAAATTTCTGTGGATGCTGTTAA GCAGAAGTTTGTATCAATGAAAATTGATCACATGCGAAATGTTGTAGTTTTCTCCAAAGTGAGTCTTGAGTCTGATGGTTTAAGGGATCACTTGGCCAAT TTTGCTGAACAATTGAACAATGCAAGACAAATGATTTATCCTCCAGAGAGGAAGCCATCAAAACTTGGAGCTTTACTTCCCTCTTTGACAGAGGTTGTGG CCAAGGAGCACAAGAGGCTTCTTGCTCGGAAATCAATTATCGAGAAGAGGAAAGAAGAACAAGAGCGGCAACTTCTTGAAATGGAACGTGAGGAAGAGTC GAAGAGGTTAAGACAACAGAAAATAACCGAAGAAGCTGAGCAAAAAAGACTTGCTGCTGAGTATGAGCAGAGGAAGAATCAAAGGATCCTCCGGGAAATT GAAGAAAGACAAATGGAGGAAACTCAAGCTTTGCTTCAGGAAGCTGAAAAGCGTATTAAAAAGAAGGGGAAAAAGCCAATCATCGAGGGGGATAAATTAT CCAAGCAGACTCTGATGGAGTTGGCTTTGACTGAACAAGTCCGAGAAAGACAGGAAATGGAGAAGAAACTGCAAAAATTAGCTAAGACCATGGATTATTT GGAAAGAGCAAAAAGAGAAGAGGCTGCGCCTCTGATTGAAGCAGCATATCAACAGCGCCTAGTGGAAGAGAGGACTCTTCATGAGCATGAGCAACAAAAA GAGGTCGAACTGAGCCAACAGCGCCATGAGGGAGATCTTATGGAGAAGGAGAGGCTTGTTCGAATGATAGGCAATAAAGAGATATATCAAGAGAGAGTTG TCAGTCACCGCCAAGCAGAATTTAGCAGATTGAGACGGGAAAGGGAGGAGAGCATCTCTAGGATTTTACAGTCCAGGAGACAGGAGAGGGAAAAAATGAG GAAGTTGAAGTTTTATCTGAAGTTAGAAGAAGAGAGACAGGAAAAATTGCGCGCGGAGGAAGAGGCACGGAAACTAGAAGAGGCTGAAAGGCGAAAGAAG GAAGAGGCTGAACGGCTGGCAAAATTAGCTGAGATAGCTGAAAAGCAGAGACAGAGAGAACAGGAACTTGAAGAAAAGGAGAGAAAGAGAAGAGAAGAAT TGTTGGGCCGAACCACCGAAGCAGCTTTGAAGACTTCTGAGCCTCTTGCTCGTCCACCCGACTCTGTATATGCTGCTCCGGCTGCAGCTGCAGCTTCTGC AGCACCAACTGCTGGGAAATATGTTCCTAAGTTCCGGCGTGAGAGGACTGAAGGCACAGGTGCTGCTCCTCCTCCGGAAACAGATCGTTGGTCTAAGCCA GACAGTGGTGACAGGTGGCGTAGTGGTGATGATCGGAGACCCTCTGCATTTGGTTCTGGTTCAAGGGCATCATCCACCTGGTCATCTTCCAGGAACCGTT GATTGTCGTGCCCCAATTTGTTGCCATCTCCATTGCAGCACTCGATTACCGGATTCTGTGCTGGTTGTGATTTTTGCTGTGGACTTTGTACTCTCCCCAT TTTGAGTTCTTGAATTATTTTTAATACTTAGTTAAATTTATTATCTCCTAATGCTAGTGGGGGTGCTCAATGCTTCTGTTGAGGAATATATGAATATGTC CTATTTATGATTGAGTTGGATTTGGTATGGTAATCAAAAAATTCAGATCATAAGATATTGCAGAAATATTTTATACTTGTTGCTATTCTGTTTCTGATTT TATTTGCTTATACTTATGCAGCAACTGATTTAGTATGTTACAAATGCTGTCAAGTGTAGATATCATCATATTATTATGCTCCGAAGCTTTGTATATTTAT GACTTTAAAATCTGTGCACCGATAATGTAAAGCTTTTTACACTGTCGGTATATCATCCACCATTGATTTGTATTACTTTTATTTGAGAGTCAACAATGG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_73405; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_258609
| Blastp | Eukaryotic translation initiation factor 3 subunit A from Nicotiana with 73.49% of identity |
|---|---|
| Blastx | Eukaryotic translation initiation factor 3 subunit A from Arabidopsis with 77.65% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (107760201) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019455570.1) |
| Pfam | PCI domain (PF01399.26) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |