Id Trinity | FTRINITY_DN57998_c1_g2_i4 |
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Name Transcript | Ll_transcript_258612 |
Sequence | GAGGAAGGTAAGGTTTCCTTGTCATACACGTTTCGAGATGACCTAAACGCTATAAATATACCATTCAATCTTCGCAATTTCTCTTCTCTTCTCTTTCTTT CCTTTGCCTTTTGCCGTTTCCCTCGGTTTCATTCACTGCATCGAAATTTTCAGAGATTTTATTTCTTTCATTTCTCATTCTCCTCTGTCTGTTTTCTCTG TCCTTTTTTAATTTTAATTTTAATTAAACACATTATTTGGTGCCAAACTCTCCTTTGTGGTTTTTTGGCTGCCAAACTAAATTTGGCATAACCTCTTTTT CCCCCTTATTGGTGCCTTCATTTTCGGTTTTCAAGGTTTTTTTTTTCAAATTCTCTACATTCATTCATGACCATTCTCGTTCTCTTCTTCCCTTCGTTGG AGCTCGTTTATTAGGAGCTCAGCAGTTGATGGACTCTTACCCTAAGAGTGGTGATAAGAAAACTTTAAAGAGGTCGTTTTTTATTGATAAGAGTTGGGTG AAATAGTAACCTTGTAGATAGTTCGATTTGTGGTCAATACTACTCAAATTTCTCACATTGTTGCTGCACCGTGTATTGGTTTACAAATCTGGATCCCATG GACTTGAAGTCAAATCATACACCTGTTCTCACTGATTCTGCTGCACCCATAAATATAACAAAGTCAAGACTGGGTGTGCATTCTAGTTTGTTGCCTTACT CCCCTACTGGGACAACCATTCCCCACAGTATGTTATTGACTATCCCAAGGAAGAAGGCCGGATTTCTTGAAGATGTTCGTTCCAGTGGTTGGTTGGATTC CATGAAATCATCTTCTCCTCCACCCAGAAAGATAACAAAGGATGTTAGTCTTGGATTTGCATCATCTGAAGCTGACTCTTCTTACTTTTCCTGGCTGCTA AAGTATCCATCGGCACTTACATCTTTTGAGCAAATCACAAACTATGCAAAAGGGAAGAGAATAGCACTGTTTCTGGATTACGATGGAACTCTTTCACCAA TTGTGGATAATCCAGACTGTGCTTTTATGTCTGACAATATGCGTGCTGCCGTTAAAAAGGTTGCAGAGTATTTTCCGACAGCTATAATCAGTGGAAGAAA TCGTGACATGGTGTATGAATTTGTAGGACTAACAGAACTCTATTATGCTGGTAGTCACGGGATGGACATCATGTGCCCGGTTAAGTCTACTAACAACCAA AAGCAGGTATAAGAATCCGAAGTTTCTACCTATCATCTGCTCCTGAAACTCTCCTTTCTACTAGTATCTTTCTAACTGGTCTCTCTTGTCATCTTTAAAA TTACAGGATATGGAAGTTAATTTATTCCAACCTGCTGCTGAATTCCTGCCCATGATTGACGAGGTAGGTAGATTTGAAAAATACTATCATGAATCCACCT TTCAATATTTTTTCATCTGAGAGTGGTATCCTGATTGACTCTTGTTTCGGCAGGTATTTAGGTCACTTGTCGAGACTACTAAAGACATTAAAGGAGCAAA AGTTGAAAACAATAAATTTTGTGCCGCTGTACATTACCGCAATGTAGATGCAAAGGTATAGATGATTAATAATTAGCACTGTTGGCCTGAAAGTTGGGGG GGTCTCTTTCTACTTTGTTGATTAGAATTTCCCCAACTTACTTCCTATGATGTTTAAATCTTGTTCTTTCTCCAATTTGATATTACAGAATTGGGATTTG GTGGGGCAATGTGTCCATGATGTCTTGAAGGGCTATCCACGTTTGTGTTTAACTCACGGGCGCAAGGTACCGATTCTAGAGCCCTTTTAACTCTCCTATT GCTAACTGTGCAGTACTCTCACAGGATGGTTCTGTTATTTAATTTCTGCTTATGCTTCAGGTTTTAGAGGTCCGACCTGTGATTAACTGGGATAAGGGAA AAGCTGTCACATTTATACTCGAGTCACTTGGTGAGTTTATTTCATTTCATGTTCATTTCATGTATATGATTACTTCTGTTGAGAATCAGAGTTCTTTGTT TCACTGTTGATGACATTAGAAATACTGTTTTGCAGGACTTGCCAATTGTGATGACGTGCTTCCGATATATATTGGAGATGACCGAACAGATGAAGATGCA TTTAAGGTAAATCTTTAGCTACCAATGATTTTATGATGCCTTAAAACTTGTTGTCTGTATTATCTGAACTTCACTCTGATTTCTTGAATACTGATATGAA ATGAACTACAACAGGTTTTGAGAGAAGGAAATAAAGGCTATGGCATCTTAGTGTCTTCAGCACCAAAGCAAAGCAATGCAAATTACTCTCTTCGTGATCC ATCAGAGGTAATAAAAACAGCATTACAGAATAACTGAGAATACAGTATCTGCTCCTGCCAGTGA BLAST |
Tissue | flowers |
Gene name | LI_gene_73406; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_258612
Blastp | Trehalose-phosphate phosphatase A from Arabidopsis with 60.1% of identity |
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Blastx | Probable trehalose-phosphate phosphatase 2 from Oryza sativa with 54.85% of identity |
Eggnog | trehalose biosynthetic process(COG1877) |
Kegg | Link to kegg annotations (AT5G51460) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019413839.1) |
Pfam | Trehalose-phosphatase (PF02358.15) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |