| Id Trinity | FTRINITY_DN57999_c0_g2_i9 |
|---|---|
| Name Transcript | Ll_transcript_258370 |
| Sequence | AGGGAAGTTGGTTTTTTGAAATTTAGGGCTTAAAGAATAAAGAGTGAAAAGCTAAAACCCTTATTGTTCAGCTTTTGGTGGAAGGAGAAGAGAGAAGAAA TATGGCGAACGAAGACATAAGCAATTGGAGTGATCTTCTACATTCTTCTACGAAGCTTCTAGAACAAGCTGCTCCTTCTGCTCAGTTCCCTCCTCTTCAG AGGAACTTAGATCAACTTGAAGCGTTATCTAAGAAGCTGAAATCCAAGACCTTAAGGACTGAGGCGCCTTCTCAATCTATTGCTGCAACACGGCTCCTTG CTCGTGAGGGGATAAATGCGGACCAGCTTGCAAAGGATCTGAAGTCATTTGAATTGAAGACAACGTTTGAGGATGTTTTTCCTGTTGAGGCAACAAGTGT TGAAGAGTATCTGCAGCAGGTTCATGAAATGGCAATGGTCTCTTCTGTCCAGGAAGCTCAGAAAGATAATATCAGAAGTTTTAACAATTACATGATGAAA GTTTTGGAGGAGGATTGGCAAAAGGAAAAGCGTGATTTCCTTCAGAGTTTAAATCGAATTTCAACATTACCTCGGACAAACATGAATGCTAATAGCAACG TTGGTACCCGCCCGGGTCAGATTATGTCTATAGCTTCCAGTCCACAAGTCTCTTCTGGTATGGAGGTTGTTCCTCTTACTAGTATTCCTATTATGGAGAA GAAGGCATCTATCTATGCTGAAGTTGTAAAAAACCTGAATAAATCAAGGGAGCGCGGGTTACCATTCAAGCCTGCTGCATCTTTCAAGAGCGCATATGAA AGTTTGGACATTGATGGTGGTGGTGGAAAATCAGTTACGATGCGGAAGATATGGCACCTTGTTCAGATGATGATGGATGGAGACCCAAGTCAGCAACGTG TTTCAGTAAGGATGTCACTGACTATTGGTGCAAGACGCCACCTTGAATTGGGACATGAGAAATACATCATGGACACCATACACAGTCATCCTGCACAAGC TGCTCTTGGCGGTGGCGTCGGGAATTTGCAAAGAATACGTGCCTTCCTTCGGATTCGGTTAAGGGATTATGGATTACTGGATTTTGATGCTGGTGATGCT CGGCGACAGCCTCCTGTTGATACTACATGGCAGCAGATATACTTTTGCTTGAGGTCTGGGTTTTATGATGAAGCAAGGAATGTTGCCCTATCTTCACGTG CCGCACATCAATTTTCTCCTTTGCTTACAGAGTGGATTAACACTGGAGGAATGGTACCAGAAGAGATTGCATCTGCTGCATCAGAGGAATGTGAAAGACT GTTGAGAACTGGTGATCGGGTTGGACGAGCTGCCTATGACAAGAAAAAGTTACTGCTGTATGCCATCATATCAGGTTCTCGAAGACATATTGATCGCTTG CTTAGAGATCAACCAACTCTCTTTAGTACAATAGAGGATTTCTTGTGGTTCCAATTGTCAGCTGTACGTGACTGCCCTAGTGGACCTTCATCTATTGTTC TAAGTGATGGTCTGGTTCCATACAGTTTGGATGATTTGCAAATTTACCTCAATAAATTTGAACCATCATACTATACAAAAAATGGAAAAGACCCTCTGGT ATATCCCTACATCTTGCTTTTAAGCATTCAATTGCTGCCAGCTGTATTATACATGTCTAAGGAAACAGGTGATGAAGGATATAACATTGATGCTGTCCAC CTATCCATTGTGCTAGCTGATCATGGGTTCCTCTCTGAAGGTGCTGGGCATAAGTTAGGAGTGATGGATGTTTATGCGGAAGTGTCTACCATTATTAGGC AGTATGGGTCCATGTATTTGCGTCTTTGTGATCTCCAAATGGCATTAGAATATTACGCTCAAGCTGCTGCTGCAGTGGGTGGTGGACAGTTGTCATGGAC TAGTAGAGGTAATGTTGATCAGCAAAGGCAGAGAAATTCGATGCTGAAGCAGCTTCTAACTGAACTTTTGTTAAGGGATGGAGGCATATATCTTTTACTT GGTGCAAGAGGTTCTGGAGAAGAAGGTGAATTGGGTCGTTTTGTGACTGATCCAAAAGCGAGGCAACAATTTTTAATTGAAGCTGCTTTCCAATGTCAGG AGGCTGGGATGTATGATAAATCTATTGAAATTCATAAGAGAGTGGGATCCTTTTCCGTGGCCCTGGATACCATCAACAAGTGCATCTCTGAAGCTATTTC TGCCCTTTTTCGTGGAAGATCAGATGGTGAAAGTCGGACTGCTGGCCTCATCCATTCTGGGAATGATATTTTGGAGACGTACACTTATTACCCTGATGTC AGGTCATATTGAAACTCTTACCTTATTTTTTGACTCATTCATGGTTATGCTTGAGGGTGAGATTGACCCAACGATAAGGTTGCTGCTTAGTGACAATGAA CTTACAAGTTCAAATCCTAGAAACTACCTATTCACTTGTAGGGGAAGGGTGCATACATCTATCATCCCTAGACCGTACTAAGTGGAAGTCTCATGCACTG GGCTGCCCTTTTTATACATGGTTATGTTTGGGTTTGAGATAGTGGTATTCTTAAATTGTTGCCTAACCTTTTATATAAGGTGTTTTTCAAATAATAATTT AATGAATCCTAGAGGCCTCTTTAGAACTTGTTCTGTGGTGATTTTACCCAGAATATGAATTGGTCCTCACTCAATTTTTTCCTTACACGTCTTTTAACAT GGAGTAACCTTAAAGATGAAAAGTCGGCCTCTGTATCTGGGAAGTCTATCTTTCCTATATACTTCACGACTCACAAGGTCAATAAAATACTAGTGATGAT TTCCTTGTAAAACAGTTGCTGAAGGGGATAATATAGTCTGGTGATTTGGGATGTACCACTGGAAGGATTTGGTCATCTTCGTTTGGTTGGTTACGCGGGT GTAGTCACAATTGAGTGGTATAGAGGTTTTAGTTTTGTTTTCTTTCTTGTACCCAGAAAAAAAATTCAAAAGTTTAAAAATAATACCTACGCAATATTTA AATTTTATAAAATTTCATGGCTTATGTCTATATTTGGTTTTCATTCATTTGCAACTATATATTGAGTGTGGATATTTCCTTAAGGAGTGGTTTGTTCATT GCCAATTCATGAGGCCTTCCTTGTGCCAAGTTCTTATAAAGAATGATTTTGGAAATTCCAGACTGCCTTACTAGTTACTGTTGCTTGAGTTACTGTAACT CTCAGAATAACTTGGTAAGACTTCGCACAGAATCGCTAAGACCAATGCATTTAATTATGAAAGTTTATTCTGTTGCCCATTCTATGTTACATTTTTGCAT TCCGTTAGTTAATAAAATGATCGATTGAATTCTTTTTGCAGTCTTCAAGAGAGACAGCTTGTCTTTGAGCAGCAAAATGTGTTAAGACAACTTGAGTCAG TATTGTCAATTCACAAATTGGC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_73413; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_258370
| Blastp | Nuclear pore complex protein NUP93A from Arabidopsis with 73.75% of identity |
|---|---|
| Blastx | Nuclear pore complex protein NUP93A from Arabidopsis with 73.75% of identity |
| Eggnog | nuclear pore complex protein(ENOG410XPN3) |
| Kegg | Link to kegg annotations (AT2G41620) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019457997.1) |
| Pfam | Nup93/Nic96 (PF04097.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |