| Id Trinity | FTRINITY_DN58011_c0_g1_i11 |
|---|---|
| Name Transcript | Ll_transcript_134460 |
| Sequence | TACTTCTCTTCCTTCAAATCTCATAACCTTATTCAACACACACACTCTCTCTCTCTCTCTCTACTTCTGTCGTTTAACTCTGAAGTGAAGTAACAAACAG ACCAAGTTTTGAAACAAAAGCAAAAACGAACGACTTCCTAGATCTGGTGAATGTGTGAAGTTGAAGGTGGCTGGTTTTGGTTTCTCATTTGGAATCGTTA GGGTTTTCAGTTTACTTCTTTTCTCACTATGACTACCAAACGCGCCTACAAGCTACAGGAGTTTGTAGCGCATGCTTCTAGTGTGAATTGCCTCAAAATT GGAAGGAAGTCATCCAGGGTTCTTGTTACTGGAGGTGAAGATCACAAGGTCAATCTTTGGGCTATTGGTAAACCTAATGCTATACTGAGTCTGTCAGGAC ACTCAAGCGGAATAGATTCTGTAAGCTTTGATTCCTGTGAAGTGTTGGTAGCTGCAGGAGCAGCAAGTGGTACAATCAAACTTTGGGACTTAGAAGAGGC AAAGAGTATGATGTTGCTTGCTGTTTCGTTCAATGATCTTAAAATACTAATGAAAAATATCCGAGCACTCTCATAACTGATCTGGTTTTTCTTTTAAATC CTACTGATAGTTGAACCTTTGGCTTGCAATGTTTCTTTGGTAGTTGTTCGCACTCTTACTGGTCATAGGTCCAACTGTACATCAGTAGACTTCCATCCTT TTGGAGAGTTCTTTGCATCCGGCTCTCTCGACACCAATCTTAAGATATGGGACATCAGAAAGAAGGGTTGTATTCATACATACAAGGGCCATACTCGAGG GGTAAATGCAATTAGGTTTACTCCAGATGGACGCTGGGTTGTTTCCGGTGGAGAGGACAATACCGTGAAGTTGTGGGATCTGACTGCAGGAAAACTCCTG CATGAGTTTAAGTCTCATGAGGGTCAGGTTCAGTGTATAGACTTTCATCCCAGTGAGTTTCTGCTAGCAACAGGTTCTGCCGATAAGACAGTTAAATTTT GGGACCTTGAAACATTTGAGCTCATTGGTTCAGCTGGTCCAGAGACAACTGGAGTGCGCTCAATTACTTTCAATCCTGATGGGAGAACTCTGCTTTGTGG GTTGCATGAGAGTTTGAAGGTCATCTCTTGGGAACCTATAAGATGCCATGATATGGTGGATGTGGGTTGGTCTAGATTGTCAGATCTTAATGTTCATGAA GGAAAGCTTCTTGGCTGCTCATACAATCAGAGTTGTGTTGGAGTCTGGGTTGTAGACATCTCGCGCATAGAACCATATGCACTTAATAGTGTGAACCAAC TGAATGAATCTTCAAGTGGAAATATGTCTGTGTTGAATGAGAACACTGCTAAGGCTAGGGTATCTATTTCACAAAATCTAGATCCATTAGTCAAGGAAAC AAGATCTCTTGGAAGATTGTCAGTTTCGCAAGATTCGGATCCCTTAAACGAGGGAAAATATTTGGCATCCGTAGGAAGCACACCGAGTACTCCTCAAAGG ATCAATTTGAACTCTGCTTCCAGAGCTGCGTCTGGTGGTTCAGCAGCAGGGCCTAATACAACAGTTCAGAAGAGGGCTTCTTTGAGATCTCATACATCAT CCAATGTACCTGCTATCAGCAAATCAGATATTATACCTGTAATTGTTCCCAGAACCAGCATAAGGTCAGAGCCTGGAGTTGAGTCTAGGAAAGAAGTTGG TGTTGCTGGAAGATTGATGTCATTGCCCTTGCAGTCAAGGGCAGCAGATATACATAAATTTTCAAACAGAGATGACGTTGATAAGCCATCAATCTCTCCA TCTGAATCAGCTTCAACTCAGGATAGTGAATTGGATACTTCTGTGGATAAAAACAAATTTCCTATGGCTGTAGCCTCAATTCAAGATGAAACTCAAGGGC AGAAAGCAAACAGAGAATTATGCTCTGGTGTAGTACCAAAAGGAGGGAGAATGCGGTCACTTATCAATTTGGAAAAGCGAGAGCGGTCTCTTAACTTTGA GGAACCTACCTCTAGAGTTTCCCATGGAAAGATGTCATCGGTTTACGTGCTCCCTCTCGATAGGAGAGGACATTCCATGTCCACTGAGAAGGCAACAGTA TCGGCAAGTGATGAAGATTCTATCGCTGATGTGATGGAACAGCATGATCAATTTCTCAGTTCAATGCAAGACCGGTTAGCCAAGTTAAAGGTGGTCTTCC GATATTGGGAAAGAAATGATGTTAAGGGGGTCATTGGTGCCATGGAAAAGATGGATGATCATGCTGTGATTGCAGATGTTGCTGACATTATTACGGAAAA AATTGATATTGTAACACTTGATATATGTACTGGTCTGATGCCTCTCTTGGCTGGCCTTCTACGCAGTGAAATGGATCGGCATCTAGGAATATCATTGGAA ATGCTGTTAAAGCTGGTGAAAATATTTGGCTCAGTAATCTATTCAACTGTATCTGCTTCAACGTCCGTTGGTGTTGATATCGAGGCCGAACAAAGGCTAG AACGGTGTAACCTCTGCTTCATAGAGCTTGAAAAAGTGAAAAGTGTATTACCCTCTCTTCTGAGAAGAGGAGGATTGATTGCGAAGAATGCGCAAGAGTT GAATCTGACTCTTCAGCATGTTTCATGATTCTAACTAATTTACTGAACTCATTGAATTGGTTCTGCCCTTCGCGTATCTGTTGGTTGCTTTTCGAGGTTT TGTGAATTTTAAGGATTTAAACCTCTCAACAAGGCACCAAAGAGTATGATGCTTTGTCATTGCCATCAATGAAGCCTGACCTGTATGTACATTTATTGCT TTTGACATTTCTGGAAGTGAAGTGGAGGCACTGATACCTGCTAATTGTACCATTATCACCGAAGCCGGAATTTACGGGCCATGTTACCCTACTGTTGGTG GATGATTGACAGTAGTTCTGACCATAACCAAACATAGTGTGCTTGAGGATGAAGATATCATTCTATAATCTATTTGACCACTAACCTAATGTGTAGCACA AGATCTAACTCTGTTTGACCACTAACCTACTGATATATAATTAATTTGTAGTTTCTGATTTCTATTCAGTTTGGTTCTTTATTTGCCTTTTTGATTGTTT AGTGGTGCCGTTCATATTTTTGCATATTCCTTGTGTCTGCTCACGGTTGTAGTGACATCGTCTTCTATGCTAAGGTTATTGTTTCTTCCACAAATTTACA TGATTTCTTACTTTGTTATTCTGCAATAGTTTATGAATTTAGCTTTAATTTATTAGCAGTATCCTCC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_73506; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_134460
| Blastp | Katanin p80 WD40 repeat-containing subunit B1 homolog from Arabidopsis with 44.62% of identity |
|---|---|
| Blastx | Katanin p80 WD40 repeat-containing subunit B1 homolog from Arabidopsis with 55.37% of identity |
| Eggnog | Katanin p80 (WD repeat containing) subunit B 1(ENOG410XQAC) |
| Kegg | Link to kegg annotations (AT5G23430) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019420720.1) |
| Pfam | con80 domain of Katanin (PF13925.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |