| Id Trinity | FTRINITY_DN58022_c0_g1_i16 |
|---|---|
| Name Transcript | Ll_transcript_135130 |
| Sequence | GCAAGTTTGAAAGCTTTGAAGCTGACCTTAACACACATTCACAGATTCACTGTCCATCACTCTTCTCTTCTTTCCACTCACCTTTCCTATTCCCCTCTTC AATTCATTGCCCCACTTTCTTTTCTCTTTCTTTTAACCCAACAACAAAATTTACTCACCAACATTAACTTCCAATTTTTCACAATTTCTTTCATTTTATT TATTTATTATCATCCTCATTGATTTTCAAATTCTAATTCATTTATTGTGAAGGGATTTAAGCCACATCTCAAAATTCTTTCCCCAATAATTGATATTGGG TCACAAACACACACTTATTGCATATCCCTATAGTTGTTGATACTTGATTTAGTTTAACCACACAAATAGAAATACCACTTCACTGTTTCTATATCAAGAA CTAGTTTTATGATAATTTTGGTATCTGGGTTTTATCCAAGTTTAGATTTTTCGTAATGGGTTGTATTTACTCTAAAGTTTGCATAGGTGATACATGTAGA GATTCCAGCATCAATGGTGATGCTATTACAAGACCTGTTGTGCTTTCTGAAACATCTTCTGATGTTCAAGAAGGTGAATTCAGAGACCAATTGAACCAAT TGAGCTTAAGCAGAGACCCTGAAGCTGGAATTAGAAGGCTAGCTAGGGTTTCAGCACAATTTCTTCCACCAGATGGGTCGCGTATTGTGAAGATACCTTC AAATAGCTATGAATTGAGGTATTCGTATTTGTCGCAGCGAGGTTATTATCCGGATGCTCTGGATAAGGCTAACCAGGATAGTTTCTGCATCCACACGCCG TTTGGGACGAGTCCTGATGACCATTTCTTTGGAGTTTTTGATGGGCATGGCGAATTTGGAGCGCAGTGTTCACAGTTCGTGAAGACTAGGTTGTGTGAGA ATTTACTCAGGAATAGTAAGTTTCATGTTGATGCTGTAGAGGCTTGCCATGCGGCATTCTTGGCTACTAATTCGCAATTGCATGCTGATATTTTGGATGA TAGCATGAGTGGCACGACTGGGATCACGGTGTTAGTACGGGGTAGGACAATATATGTGGCGAATTCTGGTGATTCGAGGGCAGTGATTGGAGAGAGGAGA GGGAAGGAATTAGTGGCGGTTGATTTGTCGATTGATCAGACACCTTTTAGGCCCGATGAGCTTGAGAGGGTGAAGCTCTGTGGAGCCAGGGTTCTTACTT TGGATCAGATTGAAGGGCTTAAGAACCCTGATGTTCAGTGTTGGGGCACTGAAGAAGCTGATGATGGTGACCCTCCTAGGCTGTGGGTGCCCAATGGTAT GTACCCTGGTACTGCTTTTACAAGGAGCCTAGGTGATTCTATTGCCGAGTCTATTGGTGTTGTTGCTAATCCTGAGATTCTTGTCTTTGAGCTCACAAGA GATCACCCTTTCTTTGTGCTCGCAAGTGATGGGGTGTTTGAGTTTCTGTCTAGCCAAACCGTGGTCGAAATGGTTGCCAAATTCAACGATCCCCGTGATG CTTGTGCTGCAATAGTGGCTGAATCTTACCGACTCTGGCTACAGTGTGAAACCCGTACAGATGATATTACAGTCATTATTGTGCATATCAATGGGCTAAC TGATCCTGCTGTTGGTCAGTCAGCAAGTTATGATGATGTTCTACCAACCCGAGTGCCTCACGCTGTTGAGGTGACAGGTTCAGAATCTCCATCCAACTTT GGCTTGAACTCTGGGAATCATCGTGTACGGCATGACTTGTCAAGGGCACGCCTCCGAGCAATTGAAAATTCCCTAGAGAATGGGCAAGCTTGGGTTCCTC CATCTTCAGCCCACAGGAAGACATGGGAAGAAGAAGCACACATAGAGCAGGCGTTGCAGGATCATTTTCTCTTCAGAAAACTGACTGATTCTCAATGTCA TGTTTTATTGGATTGCATGCAAAGAGTTGAGGTCGAAGCTGGGGATATTATAGTCCAGCAGGGTGGTGAAGGTGACTGTTTTTATGTTGTTGGTAGTGGA GAATTTGAGGTCTTGGCAACTCAGGAAGAAAAGGACGGGGAAGTACCTAGGGTTTTGCAGCGCTATACAGCTGAAAAACTGTCATGCTTTGGAGAACTTG CTCTAATGTACAATAAACCACTCCAGGCCTCTGTACGTGCTGTAACAAATGGAACTCTCTGGGCTTTAAAGCGAGAAGATTTTCGAGGGATTTTAATTTC GGAGTTCTCCAATTTATCATCCTTGAAGTTGCTTCGGTCCGTTGATCTCCTCTCTAGGTTGACAATTTTGCAACTCAGTCAGATTTCAGACTCCCTTTCT GAAGTTTCCTTCTCAAGTGGGCAGACAATAATTGATAAAGATGAAGCCCTTGCATTGTACATTATCCAAAAGGGACAAGTGAAAATCACTTTTAATTCTG ATATATTGACTAGTCCAATTGCCTGCAGCCTCAAGCCTGACATCGAAAATGAGGATGATAATGCACATAGCAGAAGAGAACTATCAATAGAGAAGCCCGA GGGAAGCTATTTTGGTGAATGGACCCTTCTTGGTGAACATATTGGTTCCTTAAGTGCTGTAGCTGTTAGTGATGTTGTATGTGCTGTACTAACAAAGGAG AAATTTGAATCTGTTGTTGGCTCCTTGCAAAAGCTTTCACATGAAGATCTCAAGTTGCGGGATAATTCGAAGCAGTTGACTGGAAACTTTGACTTTCCAT CCCTTGATAAAGTCCAGCTCTCAGATTTGGAGTGGAGAAAGACACTATATTCCACTGACTGCTCTGAGATTGGGCTTGCAAATTTAAGAGACTCAGAAAA TTTTCTGACGTTGAAGAGATTTTCTAAGCCAAAGGTGAAAAGGCTAGGAAAAGAAGCACAAGTCTTGAAAGAGAAAAACTTGATTAAGGGTATGAGCTCT TCAGCTTGTATACCGCAGGTTTTCTGCACTTCTGCTGACCGCATATATGCTGGAATACTGCTAAATACATGCCTCGCTTGCCCTTTGTCTTCCATACTTT CAAGTCCTTTGGGTGAATCAGCGGCACGGTTCTGTGCTGCTTCTGTTGTTACTGCTTTAGAAGACTTGCACAAGAATGGTGTTCTCTATAGAGGTGTATC ACCTGATGTTTTGATGTTAAACCAAACAGGACAGATACAGCTGGTGGACTTCAGATTTGGTAAGAGGCTATCGGATGAGAGAACATTCACAATTTGTGGG ATGGCAGATTCGCTAGCTCCGGAGATTGTTTTGGGTAAAGGTCATGGCTTCCCTGCTGACTGGTATATAAATAAAACTTCATGAAACCACTGATTCTCTG TAAACCACACAATCCCTTGTGTCAGTTATTCACTTTTGTTCTATCCTGAAAAAACATAAAGATAACCCCTAAACTAATATCCATTTTCTTCATGTAATTG TAAATTGATTTGAACTATAATCAATATATTGAATTACACCTGATATGCATTAATTAAATCATAGAATATTTTAGGCCCGATTACACTTTTCTCCGGTCCT TTGTTTCTTGAAGTGGTTTGTGGATGTCAAACTGAAAGCTTCCCGGTGATGATTTTGCAGGTGGGCGCTGGGAGTTTTAATATATTTCATGTTACAGGGT GAGATGCCATTTGGATCATGGAGAGAAAATGAACTCGATACAGTTGCCAAAATTGCAAAACGGAAGCTATATCTTCCGGAGACTTTCAGCCCTGAAGCTG TTGATCTCATCTCTAAGTTACTTGACACGGAAGAAAACACTAGACTCGGTAGCCAAGGTCCTGATTCTGTCAAAAGTCATCCATGGTTTAATGGTATTGA CTGGGAAGGGATTAGACACCATACATGCCCTGTTCCTGAGGAAATTATTTCTCGGCTAACGCCATACTTGGAATTTCATTCCGAGGATTGTACTGGTTCT CTAGGTTCTCCACCACAGGAAGTAGAAGAACTTAATGTACCTGAATGGCTTGAAGACTGGTAAAAGAATGAGCATTTGTTAACTTTTTAAAGTTTAGCTC TGCACCAATATTTACCTTTGCCAGTAACCCTTCATTCAGTCCTCGAAAGATTATGGCATCGTCAAGTAAGTCCTCGAAAGATTTTTATCATCGATTAAAT CCTTAAAAGATTCGAAGTGTCACAATATAGTCCTTCTATATAGCTGACACTTTGAATCTTTGAAGAATATATAGATGACATAATCTTTTGAGGACAATTG CAGTCTAAGAATGCAAAGAGATCAAGGATCTAGAATATTCCACCTGGTTAAGTAGTTCAGTTTTGTGACATAGTTGCATTGGAAAACAAATATATTCTAA GTGCTTTCCATGCTGCCTTTATTTATTGAAGTAGCTGAACTTGTAGGTAGGTTTGATATGTTCTTTTAATCTTTACCTCTTTCATTTTCTTATTTTTTGT GGGAATTACTCTCATATGTAAATATTATATATATGTACATGAGTGAGTTTATTCACATTTATGATTGAAATGTTTAGAATAATATTTTTTATGGACAAAT GTTTACTTATTCACACAAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_73564; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_135130
| Blastp | Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein from Arabidopsis with 70.17% of identity |
|---|---|
| Blastx | Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein from Arabidopsis with 70.17% of identity |
| Eggnog | transcriptional regulator, crp fnr family(COG0664) |
| Kegg | Link to kegg annotations (AT2G20050) |
| CantataDB | Link to cantataDB annotations (CNT0001152) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019436612.1) |
| Pfam | Protein phosphatase 2C (PF00481.20) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |