Id Trinity | FTRINITY_DN58022_c0_g1_i17 |
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Name Transcript | Ll_transcript_135131 |
Sequence | GCAAGTTTGAAAGCTTTGAAGCTGACCTTAACACACATTCACAGATTCACTGTCCATCACTCTTCTCTTCTTTCCACTCACCTTTCCTATTCCCCTCTTC AATTCATTGCCCCACTTTCTTTTCTCTTTCTTTTAACCCAACAACAAAATTTACTCACCAACATTAACTTCCAATTTTTCACAATTTCTTTCATTTTATT TATTTATTATCATCCTCATTGATTTTCAAATTCTAATTCATTTATTGTGAAGGGATTTAAGCCACATCTCAAAATTCTTTCCCCAATAATTGATATTGGG TCACAAACACACACTTATTGCATATCCCTATAGTTGTTGATACTTGATTTAGTTTAACCACACAAATAGAAATACCACTTCACTGTTTCTATATCAAGAA CTAGTTTTATGATAATTTTGGTATCTGGGTTTTATCCAAGTTTAGATTTTTCGTAATGGGTTGTATTTACTCTAAAGTTTGCATAGGTGATACATGTAGA GATTCCAGCATCAATGGTGATGCTATTACAAGACCTGTTGTGCTTTCTGAAACATCTTCTGATGTTCAAGAAGGTGAATTCAGAGACCAATTGAACCAAT TGAGCTTAAGCAGAGACCCTGAAGCTGGAATTAGAAGGCTAGCTAGGGTTTCAGCACAATTTCTTCCACCAGATGGGTCGCGTATTGTGAAGATACCTTC AAATAGCTATGAATTGAGGTATTCGTATTTGTCGCAGCGAGGTTATTATCCGGATGCTCTGGATAAGGCTAACCAGGATAGTTTCTGCATCCACACGCCG TTTGGGACGAGTCCTGATGACCATTTCTTTGGAGTTTTTGATGGGCATGGCGAATTTGGAGCGCAGTGTTCACAGTTCGTGAAGACTAGGTTGTGTGAGA ATTTACTCAGGAATAGTAAGTTTCATGTTGATGCTGTAGAGGCTTGCCATGCGGCATTCTTGGCTACTAATTCGCAATTGCATGCTGATATTTTGGATGA TAGCATGAGTGGCACGACTGGGATCACGGTGTTAGTACGGGGTAGGACAATATATGTGGCGAATTCTGGTGATTCGAGGGCAGTGATTGGAGAGAGGAGA GGGAAGGAATTAGTGGCGGTTGATTTGTCGATTGATCAGACACCTTTTAGGCCCGATGAGCTTGAGAGGGTGAAGCTCTGTGGAGCCAGGGTTCTTACTT TGGATCAGATTGAAGGGCTTAAGAACCCTGATGTTCAGTGTTGGGGCACTGAAGAAGCTGATGATGGTGACCCTCCTAGGCTGTGGGTGCCCAATGGTAT GTACCCTGGTACTGCTTTTACAAGGAGCCTAGGTGATTCTATTGCCGAGTCTATTGGTGTTGTTGCTAATCCTGAGATTCTTGTCTTTGAGCTCACAAGA GATCACCCTTTCTTTGTGCTCGCAAGTGATGGGGTGTTTGAGTTTCTGTCTAGCCAAACCGTGGTCGAAATGGTTGCCAAATTCAACGATCCCCGTGATG CTTGTGCTGCAATAGTGGCTGAATCTTACCGACTCTGGCTACAGTGTGAAACCCGTACAGATGATATTACAGTCATTATTGTGCATATCAATGGGCTAAC TGATCCTGCTGTTGGTCAGTCAGCAAGTTATGATGATGTTCTACCAACCCGAGTGCCTCACGCTGTTGAGGTGACAGGTTCAGAATCTCCATCCAACTTT GGCTTGAACTCTGGGAATCATCGTGTACGGCATGACTTGTCAAGGGCACGCCTCCGAGCAATTGAAAATTCCCTAGAGAATGGGCAAGCTTGGGTTCCTC CATCTTCAGCCCACAGGAAGACATGGGAAGAAGAAGCACACATAGAGCAGGCGTTGCAGGATCATTTTCTCTTCAGAAAACTGACTGATTCTCAATGTCA TGTTTTATTGGATTGCATGCAAAGAGTTGAGGTCGAAGCTGGGGATATTATAGTCCAGCAGGGTGGTGAAGGTGACTGTTTTTATGTTGTTGGTAGTGGA GAATTTGAGGTCTTGGCAACTCAGGAAGAAAAGGACGGGGAAGTACCTAGGGTTTTGCAGCGCTATACAGCTGAAAAACTGTCATGCTTTGGAGAACTTG CTCTAATGTACAATAAACCACTCCAGGCCTCTGTACGTGCTGTAACAAATGGAACTCTCTGGGCTTTAAAGCGAGAAGATTTTCGAGGGATTTTAATTTC GGAGTTCTCCAATTTATCATCCTTGAAGTTGCTTCGGTCCGTTGATCTCCTCTCTAGGTTGACAATTTTGCAACTCAGTCAGATTTCAGACTCCCTTTCT GAAGTTTCCTTCTCAAGTGGGCAGACAATAATTGATAAAGATGAAGCCCTTGCATTGTACATTATCCAAAAGGGACAAGTGAAAATCACTTTTAATTCTG ATATATTGACTAGTCCAATTGCCTGCAGCCTCAAGCCTGACATCGAAAATGAGGATGATAATGCACATAGCAGAAGAGAACTATCAATAGAGAAGCCCGA GGGAAGCTATTTTGGTGAATGGACCCTTCTTGGTGAACATATTGGTTCCTTAAGTGCTGTAGCTGTTAGTGATGTTGTATGTGCTGTACTAACAAAGGAG AAATTTGAATCTGTTGTTGGCTCCTTGCAAAAGCTTTCACATGAAGATCTCAAGTTGCGGGATAATTCGAAGCAGTTGACTGGAAACTTTGACTTTCCAT CCCTTGATAAAGTCCAGCTCTCAGATTTGGAGTGGAGAAAGACACTATATTCCACTGACTGCTCTGAGATTGGGCTTGCAAATTTAAGAGACTCAGGTCG ATAAATCTTTCTCCACTTCTTTTTATATTTTTTCTATCGATCTCCAAATTTGACTCATTCAACTCCTTTTGTGAAGTAAATTGACGTAAACTTAATCCTT GGAGGATTATGTTCCTTCTTAATTGAGTTAAATTTGAAGAACTATATATTCAGGGAATGTGAAAAATCTTTGGAGTACTAAATGGATGTAAACCTCATCT TTATAGTGGCCAAAATATCAATATATGCCCAACATTTATTCGACTTATTTTTTGGCACTTTGGCTAGCATTTGCTGCATCAACTAATAGCATCAATACAG TCAATAGTGATATTTGATAAAACATTAGATTTTGCTTTTGCTACTGCAATTTGCTGCCTAAATACAGATTGCTTGCAGAAAATTTTCTGACGTTGAAGAG ATTTTCTAAGCCAAAGGTGAAAAGGCTAGGAAAAGAAGCACAAGTCTTGAAAGAGAAAAACTTGATTAAGGGTATGAGCTCTTCAGCTTGTATACCGCAG GTTTTCTGCACTTCTGCTGACCGCATATATGCTGGAATACTGCTAAATACATGCCTCGCTTGCCCTTTGTCTTCCATACTTTCAAGTCCTTTGGGTGAAT CAGCGGCACGGTTCTGTGCTGCTTCTGTTGTTACTGCTTTAGAAGACTTGCACAAGAATGGTGTTCTCTATAGAGGTGTATCACCTGATGTTTTGATGTT AAACCAAACAGGACAGATACAGCTGGTGGACTTCAGATTTGGTAAGAGGCTATCGGATGAGAGAACATTCACAATTTGTGGGATGGCAGATTCGCTAGCT CCGGAGATTGTTTTGGGTAAAGGTCATGGCTTCCCTGCTGACTGGTGGGCGCTGGGAGTTTTAATATATTTCATGTTACAGGGTGAGATGCCATTTGGAT CATGGAGAGAAAATGAACTCGATACAGTTGCCAAAATTGCAAAACGGAAGCTATATCTTCCGGAGACTTTCAGCCCTGAAGCTGTTGATCTCATCTCTAA GGTATGGCAAGAACTATGGATCTCTTAAATGCATGCTCTAGGAAGATCTTAACCATTAATTTTAAAGAGTCACATAAATGTTTGTAAAGCTCAACCAATC GTATAAATGTTAGAAGTGATTTAATTTTTCTAGTCTCAAAAAGTCAAAATGCACATGGCTGCATGCATTTGAAAACATCTATGCATACTTATTCTCTTTA CATGACCAATTTGTTCAGTTACTTGACACGGAAGAAAACACTAGACTCGGTAGCCAAGGTCCTGATTCTGTCAAAAGTCATCCATGGTTTAATGGTATTG ACTGGGAAGGGATTAGACACCATACATGCCCTGTTCCTGAGGAAATTATTTCTCGGCTAACGCCATACTTGGAATTTCATTCCGAGGATTGTACTGGTTC TCTAGGTTCTCCACCACAGGAAGTAGAAGAACTTAATGTACCTGAATGGCTTGAAGACTGGTAAAAGAATGAGCATTTGTTAACTTTTTAAAGTTTAGCT CTGCACCAATATTTACCTTTGCCAGTAACCCTTCATTCAGTCCTCGAAAGATTATGGCATCGTCAAGTAAGTCCTCGAAAGATTTTTATCATCGATTAAA TCCTTAAAAGATTCGAAGTGTCACAATATAGTCCTTCTATATAGCTGACACTTTGAATCTTTGAAGAATATATAGATGACATAATCTTTTGAGGACAATT GCAGTCTAAGAATGCAAAGAGATCAAGGATCTAGAATATTCCACCTGGTTAAGTAGTTCAGTTTTGTGACATAGTTGCATTGGAAAACAAATATATTCTA AGTGCTTTCCATGCTGCCTTTATTTATTGAAGTAGCTGAACTTGTAGGTAGGTTTGATATGTTCTTTTAATCTTTACCTCTTTCATTTTCTTATTTTTTG TGGGAATTACTCTCATATGTAAATATTATATATATGTACATGAGTGAGTTTATTCACATTTATGATTGAAATGTTTAGAATAATATTTTTTATGGACAAA TGTTTACTTATTCACACAAG BLAST |
Tissue | flowers |
Gene name | LI_gene_73564; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_135131
Blastp | Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein from Arabidopsis with 71.36% of identity |
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Blastx | Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein from Arabidopsis with 71.36% of identity |
Eggnog | transcriptional regulator, crp fnr family(COG0664) |
Kegg | Link to kegg annotations (AT2G20050) |
CantataDB | Link to cantataDB annotations (CNT0001152) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019436612.1) |
Pfam | Protein phosphatase 2C (PF00481.20) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |