| Id Trinity | FTRINITY_DN58024_c0_g1_i8 |
|---|---|
| Name Transcript | Ll_transcript_135357 |
| Sequence | CAACGCTCCACTCCAAAATTCCTTTTTAATCTTAAAATAATTTCAACTCAAAGAAAGAGTGCGTTTTCTAAATTCTAAAAAACCTTTAGCACTAAGTCAA CGCTTCTCTCTCTCTTCACCTTCTTCTTTTTCTCAACTTCTTCATTCTTCACCCTCTACCACCACTTCTCACCATGAACAATCAGTTTTAACAACCTCCT CACTCATTTCTATATTCTATTCTATTTTCACTTGCTATGGGTAACGGCGTTGGAAAGCTAACCGTGTGTTTCACCGGTCGCCGGAAGCATCATGAAATAC CCTCTTGTATAACGGAGCCACTAGACGAGGGTCTGGGTCACTCTTTCTGCTACGTTAGACCCGACCCGACTCGTTTATCTTCTTCAAAAGTCCATTCTGA AGAAACGACGACGTTCAGAACAATCTCTGGTGCGTCGGTGAGTGCTAACACTTCAACGCCACTCTCAACCGCTTTCGTAGATTTATATTCATACGGTTCA ATCGATAGAGCCGCGGCTTTCGAATCTTCAACTTCTTTCGCTTCTCTCCCTCTTCAACCAATCCCCAAAGGTTTAATAAACTCGGGTCCGTTCTCCGGTA GCGTAACCGGTTTTCCCGGTTCGGGTCCTCTCGAGAGAGGGTTTTTGTCCGGTCCGATAGAGCGTGGGTTCATGTCTGGTCCGATTGAAAAGGATGTTAA CGGTTCGGATCAGTTTCAGAGAAGCTTCTCTCATGGTGGACTAGGTTTAGTGTTCAAACCTAGAAAGCAAAAGGGTCGTTGGATTCGGCTTCTTCAGAGA GCGATATCGAAGACACTTTCTCGTGGGCAGAACTCAATTGTTGCTCCTATCAAAGGTGTGATTATGAAGGAACATGATTGGGTTGTTGCTGCAGTGGAGA AGCAGAATCATAACGAGAATTTGACTGTGAATAGTGTGAATTTCAGCTGCGAGGGTAGTTTGGAAGATGATGATTCGATGGAAAGTCAGAATCTTCAATG GGCTCAGGGTAAAGCAGGGGAGGATCGTGTACATGTGGTGGTTTCTGAGGAAAACGGTTGTGTTTTCGTGGGGATTTACGATGGTTTCAATGGTCCTGAT GCACCTGATTACCTCCTATCGAATCTTTACACCTTTGTCCACAAAGAATTGAAGGGGGTGCTTTGGGATGATAATTCTGAACAAGTTGTTTTGAAAGAGA ATCAGAATTTGGAAGTGCAAGTTGATGATGATGGTGATTATTGTTTTCAGTGTTTTGATGATGACAATCGTCCTTGCACAAGTGGTGATGATGCATGCAA GGAAAAGAGGGTCAAGAATTGCAAGAATAAGTACAAGGGTTCTGCGAAGAAACGGGAGGAAAATCAGAGAAGGTGGAAGTGTGAATGGGATAGGGAAAGA TTAGAGCTAGATAGAAGATTGAAGGAGCAATTAACTCGATCTGCGTCAGGTGAGAAGAATACGAATACTAGCTCAATTAACCATTTTGATGTGTTGGAAG CTCTTTCAAGGGCTTTGAGGAAAACTGAGGAGTCTTATTTGGATGTTGCTGATAAGATGGTCATGGAGAATCCTGAATTGGCTTTGATGGGTTCGTGTGT GCTTGTCATGTTAATGAAGGGGGAGGATGTTTATGTGATGAATGTTGGAGATAGTAGAGCTGTGTTGGCACAAAAGGTGGAGCCTGATTATTGGCTTGGG AAGATTAGGCAGGACTTGGAGAGGATCAATGAAGAAACCATGAATGATCTCGATGAATCTTGGGATGATGCTGATATATCAAGCTTGGTTCCCACTCTAA GTGCGCTCCAGCTTACCAAAGATCATAGTACTAGTGTTGAAGAAGAAGTCCAGAGAATAAAGAACGAACACCCGGATGATCCTTGTGCAGTAGTAAATGA TCGTGTTAAGGGTTCTCTGAAGGTTACCCGAGCTTTTGGTGCTGGATTTCTCAAACAGCCCAAGTGGAACAATGCACTTCTAGAGATGTTTAGAATAGAC TACGTTGGAACTTCTCCTTACATCAGCTGCGAACCATATCTAAAACACCACAGATTAGGCCCTAAGGACAAATTTTTGATTCTATGCTCTGATGGGCTCT ATCAATACATGTCAAACGAACAAGCAGTTGCGGAAGTTGAACTTTTCATCACGTTGCAACCTGAGGGAGACCCCGCTCAGCATTTGGTTGAAGAAGTGTT ATTTCGTGCGGCAAACAAAGCAGGTTTGGACTTCCACGAGTTGCTTGAAATTCCACAAGGTGATAGACGGCGTTACCATGATGATGTTTCCATCATTGTT ATTTCTTTGGAAGGAATGATATGGAGATCATGTGTATAAGTACAGTGAAAAGCATATATGATATAAGAAAGGAAGGAGATGAGGAATATAGTACTCTCAG GCATGACCTTTTTGCTGTTTTCTCCTCTTCATGCTCACCATTTGTAAAGTAGCAGCTAAACACTGTAAGAGTGTCTTAGTTGAGCAGTTCAGTGAGTGAT GAGGATTGTAAAGTTGTAAAAGCTGGATTTTGTTGATTATAACTCTGGTATAAAATTGTTATTTTAGTAATAAAAACATTCCTTAAAATATTTTCTTTGT GCATACAGCACTTGCTAGCACCTTCCATCACTTTCTGTTGCTATGGTTGGGCAATGGTCTCATTGTGTTATGTTTGCCTTTTCCAATTTGATGTGGATCA CCCACTATTTGCAATATTGCTCCC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_73572; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_135357
| Blastp | Probable protein phosphatase 2C 4 from Arabidopsis with 66.71% of identity |
|---|---|
| Blastx | Probable protein phosphatase 2C 23 from Arabidopsis with 66.2% of identity |
| Eggnog | Phosphatase(COG0631) |
| Kegg | Link to kegg annotations (AT1G07630) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019448630.1) |
| Pfam | Protein phosphatase 2C (PF00481.20) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |