| Id Trinity | FTRINITY_DN58041_c1_g1_i10 |
|---|---|
| Name Transcript | Ll_transcript_135508 |
| Sequence | CAGTGATCGAATCAGAGAAGATCGAAGCATAGAAGCGCGATGAGGAAGTGGTCGCTACCTTCCGCTATCTTTCTCCTCTCTCTCCTCATTCTCATTTCAG ATCAAGGTCGAAAGATTGAAGCAAATGCGGCGAGTGATTCGGAAGAGCATGTAGATCTACCTAAAGTGGAGGACAAGATCGGTGCAGTTCCATCTGGTCT TTCAACCGATTCTGACGTGGTTAAGAGGGAGGCTGAGTCTATCTCAAAGAAATCGCTTCGCAGCAATGCGGAGAAATTTGAGTTCCAAGCTGAAGTGTCG CGTCTTATGGATATTATCATCAATTCTCTCTATAGTAACAAGGACATTTTCCTTAGAGAGTTGATCTCCAATGCATCTGATGCGTTGGACAAGATTAGGT TCCTTTCTCTTACCGATAAGGAGATTTTGGGTGAAGGAGATAATGCTAAGCTTGAAATCCAGATTAAGTTAGACAAGGAAAAGAAAATCCTATCTATTCG AGACAGAGGTATTGGTATGACTAAGGAAGATTTAATAAAGAATTTGGGGACCATAGCAAAATCTGGAACCTCATCTTTTGTTGAGAAAATGCAGAAAACT GGAGACCTCAATCTTATTGGGCAGTTTGGAGTTGGTTTCTACTCTGTGTACCTTGTGGCAGATTACGTTGAAGTCATTAGCAAACATAATGATGATAAAC AGTATGTGTGGGAATCTAAAGCCGATGGAGCTTTTGCAATTTCAGAAGATACATGGAATGAACCTCTAGGACGTGGAACTGAGATTAGGATACACCTCAG AGATGAGGCCCAGGAGTACTTGGAAGAGTTTAAGCTTAAAGAATTGGTGAAGAAATACTCTGAATTTATTAACTTCCCTATCAATCTTTGGGCAAGTAAA GAGGTTGATGTGGAGGTTCCTGCTGATGAAGTCGAGTCTAGTGAGGAGGAGGAAGAGGAATCATCTAAAGCAAGCTCCGAGGAAGAAATTGAAGATGAAG ATGCTGAAAAAAAGCCCAAGACAAAGACTGTGAAGGAAACAACTTATGAGTGGGAACTTTTAAATGATGTGAAAGCTATATGGCTGCGGAATCCAAAGGA TGTTACAGAGGAAGAGTACAACAAATTCTACCACAGTCTTGCCAAGGATTTTAGTGATGAGAAACCTGTAACATGGAGTCACTTTAGTGCGGAAGGCGAT GTTGAGTTCAAGGCTGTCCTTTTTGTGCCACCTAAAGCTCCTCGTGATTTATATGAGAGTTATTATAATGGAAATAAATCCAACCTGAAGTTGTATGTTA GAAGAGTGTTTATTTCAGATGAATTTGATGAATTGTTGCCAAAATACCTCAGCTTTTTGCAGGGTCTTGTTGATTCTGACTCATTGCCACTTAATGTATC ACGAGAAATGCTTCAACAACACAGTAGTCTAAAGACAATCAAGAAGAAACTTATAAGGAAAGCCCTCGATATGATACGGAAGATTGCTGAGGAGGATCCT GATGAGTCCAATGACAAAGAAAAGAAAGAAGAGGTATCATCTGACAACGATGAGAAAAGAGGTCAATATTCTAAGTTCTGGAAGGAGTTTGGGAAGTCCA TTAAACTTGGTATCATCGAAGATGCTACTAACAGAAATCGTCTAGCAAAACTACTCAGATTTGAGACGTATGTTACTTAATTCCTGTAATCAAAATTCAA ATTGTGTAATGTTATCTTCCCTCCTTTCGTTTGTTAACAACTTTGTTGATACTTAATCCCTTTCAGTTCCAAGTCCGAGGGTAAACTGACTTCTCTGGAT CAGTACATCTCTAGAATGAAATCTGAACAGAAGGATATCTTTTACATAACTGGAACCAGCAAGGAACAATTAGAAAAATCTCCATTCCTTGAGCAACTTA AGAAGAAAAATTATGAGGTTATTTTCTTCACTGATCCTGTTGATGAGTACTTGATGCAATACCTCATGGATTATGAGGACAAGAAGTTCCAAAATGTGTC CAAGGAGGGCCTGAAACTCGGGAAGAGTTCTAAAGACAAGGAACTGAAGGAATCCTTCAAGGATCTTACTAAGTGGTGGAAAAAGTCCCTTGCTGCTAGT GAGAATCTTGATGATGTGAAGATATCCAACCGATTGGATAACACCCCTTGTGTGGTGGTGACATCAAAATTTGGTTGGAGTGCCAACATGGAAAGAATCA TGCAGTCTCAAACTTTGTCAGATGCTAGCAAACAAGCATACATGCGGGGCAAGAGGGTTCTTGAGATCAATCCTAGGCACCCTATAATCAAGGAGCTCCG TGAGAGAGTAGTAAAGAACCCTGAGGATGAGAGTGTGAAGCATACAGCAGAGCTGATGTACCAGACTGCACTCTTTGAAAGCGGCTTCCTACTTGACGAT CCCAAGGATTTTGCTTCACGTGTTTATGATTCAGTGAAGTCTAGCTTAGACATCAGTCCCGATGCTGCAGTTGAAGAGGAAGATGACACCCAAGAAGTCG AGGCTGAAAGTGACACGAAAGAAGATGCATCTACTTCAAAGGCGGAAGCTGAAGCTGTGAATGATGAAAATAATGATGCCAAAGACGAGTTGTAGATTTT TCTGCTGCCTCTGTTTCTTGGTTTAGTTTTATGAAATAGATCGAAGAGCCCTCTAGAATGAGTATTGACTCCCTATGAAGTTGTTAAAGGAGCACGTTAG TCTTAACTTAATCACCGTCCAATGGAACTTTTGTTTGGTGAAACATTATCCAATGGAATTTCCCTTAGCATTATAGTAAACTGTTAGAGAAAATCTACTT CTGTACTTCTTCATGTAACTCAGTAGGGTGTCCTTTATGTTTAATGTTCAGCCTTTTCCACCCTGTTAACAATTTTAATCCTGTAAGTGCAAAAATTGTT GAGTAAAAATGCTGTATCCAATCTCTGGCCGATCCTTAAGTAGTTTATGCTTAGAAAATGTTATCTTTTTCTGGTTGGAATATAGGTCTAATAACATTTT GTAATCATAAAGGTTAGCCATTGAATTGAATTGGAATATTCTTAATGAAGGGCTGTACTAATGTTCACGGCTTCACGCTCAGTTTGAACCTGAGGTAGAA CTTGAAGCATTCATAAGTCCTCTGGCTGCTACAATTGAGGTGAAGATCTGAGTCCAACTTTTCAGATTTGAGTCTAATGTATCGACAAAAAATGTAAGTC ATGCCATACTTTAATTATTGTGATTGTATATCATCAATTCAACGCTAACTATAAGTGCTCTTTAACTAAATAGATTCTACACAATTACGCAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_73663; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_135508
| Blastp | Endoplasmin homolog from Catharanthus with 82.85% of identity |
|---|---|
| Blastx | Endoplasmin homolog from Catharanthus with 79.3% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019416726.1) |
| Pfam | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (PF02518.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |