| Id Trinity | FTRINITY_DN58046_c2_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_137005 |
| Sequence | CTTTCTTTTATTTAGGTTTCAGATTTAAAATTCACTTTTTATTTATATTTTTTTGGATTTGTTAGGTGATGATGATAATGAGAACCGGTACGTAGAGAAT ACGGTTCCTTTGGACTATGATATTGACGGCGATGATGCCTTGTTATCAGAAGAAGAAGAAACGGAACCGGTAAACCTCGCCGGTGAAACTCAGCGGCTGG ATGATTTTGATGACAGTGATGGAGATTGTGATACTCAGTTATTCGATGAAGAAAGAGGTGGTGGTGGAACTGAAGTTTTGGAGAATGTTGATTCTGATGA TCCTCATTGTGTTGACACTGCTCAATCACAGGATACTACTGCTGGGAAGAAGAAATTATCGGAGGAGAGTGACGATGTTCGTCATCGAAACACTAATTCA GGTTCGATGCCACCGCGTTATACTTTTCTCCGTGCAGAATCTTTGCGGCGAGCTGCTCTAGCTAGACGAAATATGGCTTTGAAACAGACCCATGTTGAGA CGAATTCTATCATGGATGTGAGTCAGTCATGTCGGGAAACACTGGCTGTAAATGATAATGGGGAACCTGTTCCTACACGTTCTGAGAAATTTTGTGGAGT TGGTCAGGAAAACCATCGCGGGAAAGATAGTGTGGAAGTTGCGGGATCAATGGACAAAAATATGTGCAAGGTTGCTAGCACAGCTGTGAGAAAACTTTTC ATCGATGATTTAACTTTTGAAACTAGTGAAGCTTCTCTTATCTGCAATGATTTAAATGAAGAAGATAGCTTAGACAAGTTGCCTATCTACCATGATGATT TGGCAGGGCTAAGCTATATTGACTCTCAAGAACCTGGAGACCTGTCACAGATAAATGCTCTTGATTTTGTAGACAAGTTTCTCAAAGATAACGCCATGGA CTTGGATCAAGAAATTAGACCTGTTAAAAACGTGGAGGAAAAATCAAAATCCCTCCCCCCTTCAAAAGGGCAACAAAGTTTGGCCAAAAGAGTTAGTGAT AGAGGCAAATCTGGAGAAGCTGAGATTTATGACTGGAATGATAGCTGCGAGGATGAAGGCGGGGGAGATATATTCCTCAGGAGAAAGGAAGATTTTTTTG ATGGTAGAACTCATAAGCCAAAGTCTTTGCCAGGACTCCAGAAGATCAAAGTGCGCAGATCAAATGATGATAATGATGAGAAACAATCAAGTTTCCCTAA AAAAAGAAAGATGGCAGTCCACTCTGATTCAAGACTAGGGATGCTTAATCTGAAAGTAAGGGATAATACTGTACAAGAAGGAACAAGAAAATTAAAACGG AATCTTGCTAATGAATTGGATGAACAATTCAAGACCAATTGCTCTGGAGGAGAGGTGCAACGTAATCCTAAAGCAGGTGTGCAGGAAATGTTGGATGTAG GTATAGATACTCAAATAGCTGCTGAAGCTATGGAAGCCTTATGCAATGCTAATGATATTGTTGCTAATGATGTTGCTCGTGTTACTAGAAGTAGAAAAAC TGGTCAACTTAGTAGCTCTATCATCGGGAAAGCTGGGCCAGCTATATCAAAGGAACATTCAAGACAGTATGATAGGAAAAGGAAAGTCAATGACAAATCA GATCTGCAAACTCCAGGTTTATCAAAGAAAAGTACTAAAATGGTCAGACAGTGCAAACAGGATAATGTGATGACAAGGTCAATGAGGAGTAAGTTAAATG CAGAACGCAACCAAACCTGCAGTGCTAATGAAAACGATAGAATAGTCTCATCTCCAAAAAATGAGCAAAGAAAGTCTGCAGAAACTTTGAAAAGACATCA GCTTGATGAGCTAAATAATCTTGATAGCAACGGCAGTGGAGGGAAGACAATCAACAAAAAGCATTTGCACAGTGAAGTTTGTCATTTTACGCCAATTGCT CGCAGAACTAGACAATCTCGTCCAGTAAATCGATTGATCAAGTCTGATGTAGGATCCAAAAGTTTGGGAGGAGATATAGCAAATGGTTCTCATGAGAAAA GGAGTGGCATTGGCCGCCACTCGTCTAAACCATTGGATACTAAATCTACTCCAGGGTCTTTTGATCACTTTGAAGTAGATGCTAGTACTGAGTTGTGTGA ACTTGAGACATTGGCTCCAAAGGCAAATGCTGTTAGTGTAAACGGTGATGTTGAAATGGGTACAATAGATTTTCCTAAAAGAAGGAGATCCATTAGGATT AGGGAGTTCTCTAGCAATGATAAAGGATCTGAAAAGCTAGTTGGTCCATCTAAAGCAACTGCACAGCCTGAAGATATTGGGCAATCTACTGCTAGCATGA GAAAAATGAGAACAGGTTCTAGAAGTGCCGTCAAATCGCTGGTGAATTGCCGAACTCAATCATCTTTATATGGTGGTTCAGAAATATCTTCTATTGACCA AAGACAAGGAAAAGCATTGAAGCCAAATTTGGATAAAGTAACTGCAGGTGATACACATATTTGTTATAATGTTGCAGATAAAAAGGATGCAAATCTGAAT TCAGTTGAAAAGAATAATGCAGATGATTTTTTGTCTACGAATACTTTTGAATTCACAAATTCGAATGAATCTCCAAGAGGGGGGTACAAGTCAGCTGACT TGGCTTCTGCAACTCCTGCTAATTGTAAGACACTGGTGAATGATGCATCACCTGTTTGTATGGGTGATGGTTATTACAAACGATCATGCAATATAAATGT TTCAAATTCATGCCTTCTCAAAGTATTTCGTGAGGATCTAGATAGAGAACTCGTTAGCTTACGTGCCATTAGACCTGAATTAACTACCCCATCTAAACAT TCAAGGAAGAGGAGGGATATGACTGATGTTCGAATTCTGTACAGCCAACACTTGGATGAAGATATCGTTAAGCATCAGAAGAAGGTCTTATCGCGGCTAG GAGTTTCTGTAGCATCCTCCATAGCAGATGCAACACACTTCATAGCTGATCAATTTGTGCGTACAAGGAATATGCTCGAAGCTATTGCTTATGGCAAACC GGTGGTCACACACTTATGGATTGAGAGCTGTGGACAGGCTAGCTGTTTTAGTGATGAGAGAAACTACATACTGAGGGACACCAAAAAGGAAAAGGAGATT GGTTTTAGCATGCCAGTGTCGCTAGCACGTGCATCCCAACATCCACTTTTAGAGGGTCGTAAAGTACTGATCACCCCAAATGCTAAACCTAGTAAAGAGA TTATTTCAAGTTTAGTGAAGGCAGTTCAGGGCCAGGCAGTGGAGAGAGTCGGCAGATCTGCATTGAAGGACCATAAATTTCCAGATGATCTACTGATCCT ATCTTGCGAAGAAGATTATTCCTCTTGTGTGCCTTTTCTTGAAAAGGGTTAGAAACTGTTCAATATTGCTTTAAAATCTTATCGTCCACACAATTAAGAA CGTAGTGTTCTGGTCTTGCAGGGGCAATGGTTTGCAGTTCTGAACTATTGTTGAATGGCATAGTTATTCAGAAGTTGGAATATGAAAGGCATAGTCTTTT TGCAGACCA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_73711; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_137005
| Blastp | Mediator of DNA damage checkpoint protein 1 from Sus with 28.57% of identity |
|---|---|
| Blastx | Mediator of DNA damage checkpoint protein 1 from Sus with 28.57% of identity |
| Eggnog | DNA repair(ENOG4111RPS) |
| Kegg | Link to kegg annotations (100144453) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019418972.1) |
| Pfam | Regulator of Ty1 transposition protein 107 BRCT domain (PF16770.4) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |