Id Trinity | FTRINITY_DN58064_c3_g1_i11 |
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Name Transcript | Ll_transcript_134432 |
Sequence | ATATATATATATATATATATATATATATATATATAGTTGCCACGTGGCAACCAAGCAATCATCAATGTGTGGATGTTATTACCAAGTACCAACCTTTGAG GATATGATTATATGTACACTCAATTCAGCCACTAATATAAGTCCTTCCCTCTGGTTATTCTGCTCTCTTCAAAAGAAACCTTTCTCTGTGTTTAATTGCA TTACCTCTCCTCTCTGCATTCCAAGTACTACTCAGTCATGGCTGCTTCATTATCCACTGTTGGAGCTGTCAATGTTACTCTAGTATAATGCTTTTCCTAC TTTGTTATTATTCTAATTAATTATTCCTATCCTTATGATCTTTTCTCATTTAATGATATGCATGTTAATAGCAACTTTTCCTTGGTCATTAACTGTGACT ATAAGTTTGGTAAACCATTAAGGGTAAAAATATTGATACCATACTATAAATTAGTAATTTGGTAGTATGTATTGTAATTTGATAGTTAATATATAGAGAC CAAGCTTTTCTAACGTGAGCATGTTAGAGGTATCCATTGTCATCTGATAAATTAGATAGACATATATATTAACCCTCAAGATAGTCCAAGGATGCATTAC ACATAACTTATTCAGTTTACAGAAAAACTTATTACCATGTATAGATACCAAAAAAGAAAAGAATGTGCTATTTCCCACTTGAGGTATAATAGAACTGGTT TGGGAATTGGAAGCATGTAATAAGTGAGTGAACTTTTAAATATTGTTAGAATAGTCTTAAAGAGTAGCTGCTATGATATTGCAGCTGAGCTTGAATGGCT CTGGAGCTGGAGCTTCAGTTCCTAGTTCAGCCTTCTTTGGAAGCAACTTGAAGAAGGTTACCTCAAGGCTCCCGGACACCAAGGCTTCCTCTGGTAGCTT CAAAATTGTTGCCGTAGAAGAGATTGACCCGAAAAAGCAGACCGACCAAGATAGATGGAAGGGTCTTGCCTATGATATTTCAGATGATCAGCAAGACATA ACAAGGGGGAAGGGTATGGTTGATTCCCTTTTCCAAGCTCCGGCCGATGCTGGCACTCACTATGCAGTCATGAACTCCTATGAGTATATTAGTACTGGGC TTAGAGAGTACAACTTGGACAACAACATGGGCGGTTTTTACATTGCTCCTGCTTTTATGGACAAGCTTGTTGTTCACATCACTAAGAACTTCATGACACT GCCCAACATCAAGGTTCCTCTCATTCTTGGTATATGGGGAGGCAAAGGTCAAGGAAAATCATTCCAATGTGAACTTGTCTTTTCCAAGATGGGAATCAAG TGCGTTATTGCTATACTAGCCCCTCCTAAAATAAATGTTTAGGCATAAAAATGTTCATGAGCCTTTACCTAATAGTATAAGCTTCTAGAAAAGTTAGTTG TTGATATGATACAACACAATGTCTATGAGCTTAACCAACATTATTCTTCTAAGTAAAAAATTCAATTTAAACATCGCAATGTAAGGTGGGAAAGTTGTTT CTTGATAATTGACAAACTATACTGCTACACAATAGTTCAGTTGAATATATTAGCAATTAATTCAAATTTAAAAGTTTCTTTGATGCATTTCAATTCAATA AATTTTGGTGCAAGAACGGTACTCGATGGAACAGGTCCGAGATGATATTTTGTTCTGTTCTCTTTGGTTCCACACCACAACTTTTGGTAAACAAACTTCT CTGTTATGTTTACAGAATACACCAAACTGTCAAGCAAATAGCACAACTACACAACCATATTTTCTGTTCCATACTCTTTTGACATTCCTACCAAAATCGT AGTGTGCATTGGCTTCTACAAATTTGATGTCTTCCTTGAATATATGTATTGCTACTAATTTCTAGTCCTTGTGATGTTGCAATTACATTAAAGCCCTATC ATGATGAGTGCTGGAGAGTTGGAAAGTGGAAATGCAGGAGAGCCAGCAAAATTGATAAGGCAAAGATACCGTGAAGCTGCAGATATAATAAGGAAGGGAA AGATGTGTGCCCTCTTCATCAATGATCTTGATGCAGGAGCTGGCCGTATGGGTGGAACCACACAGTACACTGTGAACAACCAGATGGTGAATGCTACACT CATGAACATTGCTGATAATCCAACAAATGTGCAGCTTCCTGGTATGTACAACAAGGAAGAGAACCCGCGTGTGCCTATCATTGTCACTGGTAACGATTTC TCAACATTGTACGCTCCTCTCATCCGTGATGGACGTATGGAGAAGTTCTACTGGGCACCTACTAGGGAAGATCGCATTGGTGTGTGCATAGGAATCTTCC GCAGTGACAATGTTCCTAAAGAGGATGTTGTCAAGATTGTTGACACCTTCCCTGGTCAATCCATTGATTTCTTTGGTGCACTCAGGGCCAGAGTATATGA CGACGAAGTGAGGAAGTGGATTGGTACTGTTGGTGTTGACGGCATTGGAAAGAAGCTTGTGAACTCAAAGGAAGGACCTCCAACCTTTGAGCAGCCCAAG ATAACTGTGGAAAAGCTCTTAGAGTATGGTTTTATGCTTGTCCAAGAGCAAGAGAATGTGAAGAGAGTCCAACTTGCAGACAAGTACTTGAATGAGGCTG CTCTTGGTGATGCTAACCAAGATTCTATCAAGAGAGGATCTTTCTATGGCAAGGCAGCACAGCAAATAAATGTTCCCGTTCCCGAAGGTTGTACTGATCC AAATGCGAAAAACTTTGACCCTACTGCTAGAAGTGATGACGGATCCTGCTTATACACATTCTAAGCATATCAGGTGAAAGGAGAAGATGTTAAGATGAGA GATAACTGAATAAGTTTTATTATATTGTTCATCCTCTATAATTTTGAGTTATGTTGTGAACAATGTTTAATGGATTTGGTCCTTTGTCTTGTGTCTACCT TCCAGTCATGATATTTGTATCTCTTGTGTTTAATTCCTGGATACTCCATTCTTAAACGTTTTGTAATCCTACTGTAAATTAGACATTGAGGTTTTTGGTC TATCAACATCTTATAATAAGGAGCCTTTTCCATCCTAAACTTTTATTCATCTAAAAAAATTGTTGCATTGTCTAAATGTTTGCATTCATAAACTGCCCTA AAGATGAT BLAST |
Tissue | flowers |
Gene name | LI_gene_73854; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_134432
Blastp | Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic from Oryza sativa with 87.15% of identity |
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Blastx | Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic from Oryza sativa with 85.28% of identity |
Eggnog | 26S protease regulatory subunit(COG1222) |
Kegg | Link to kegg annotations (4351224) |
CantataDB | Link to cantataDB annotations (CNT0002861) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019461023.1) |
Pfam | ATPase family associated with various cellular activities (AAA) (PF00004.28) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |