| Id Trinity | FTRINITY_DN58064_c3_g1_i9 |
|---|---|
| Name Transcript | Ll_transcript_134430 |
| Sequence | AGACAGCAGCCAAATTATTGAATAAGATGAGTGCTCCTAACCCATTCTTGTGTTGTGTGGTGATAATAAATGCTCCCTAATACTACTGATGGATCAGGAT AAGCTTTCAATGCCAGCCTCAAACATTTTTTGTCACATAAGGGTGACTGGAATCTTCCAGTAATATACATACATATAGATACACTCATATATATCTATAT ATATATATATATATATATATATAGTTGCCACGTGGCAACCAAGCAATCATCAATGTGTGGATGTTATTACCAAGTACCAACCTTTGAGGATATGATTATA TGTACACTCAATTCAGCCACTAATATAAGTCCTTCCCTCTGGTTATTCTGCTCTCTTCAAAAGAAACCTTTCTCTGTGTTTAATTGCATTACCTCTCCTC TCTGCATTCCAAGTACTACTCAGTCATGGCTGCTTCATTATCCACTGTTGGAGCTGTCAATGTTACTCTAGTATAATGCTTTTCCTACTTTGTTATTATT CTAATTAATTATTCCTATCCTTATGATCTTTTCTCATTTAATGATATGCATGTTAATAGCAACTTTTCCTTGGTCATTAACTGTGACTATAAGTTTGGTA AACCATTAAGGGTAAAAATATTGATACCATACTATAAATTAGTAATTTGGTAGTATGTATTGTAATTTGATAGTTAATATATAGAGACCAAGCTTTTCTA ACGTGAGCATGTTAGAGGTATCCATTGTCATCTGATAAATTAGATAGACATATATATTAACCCTCAAGATAGTCCAAGGATGCATTACACATAACTTATT CAGTTTACAGAAAAACTTATTACCATGTATAGATACCAAAAAAGAAAAGAATGTGCTATTTCCCACTTGAGGTATAATAGAACTGGTTTGGGAATTGGAA GCATGTAATAAGTGAGTGAACTTTTAAATATTGTTAGAATAGTCTTAAAGAGTAGCTGCTATGATATTGCAGCTGAGCTTGAATGGCTCTGGAGCTGGAG CTTCAGTTCCTAGTTCAGCCTTCTTTGGAAGCAACTTGAAGAAGGTTACCTCAAGGCTCCCGGACACCAAGGCTTCCTCTGGTAGCTTCAAAATTGTTGC CGTAGAAGAGATTGACCCGAAAAAGCAGACCGACCAAGATAGATGGAAGGGTCTTGCCTATGATATTTCAGATGATCAGCAAGACATAACAAGGGGGAAG GGTATGGTTGATTCCCTTTTCCAAGCTCCGGCCGATGCTGGCACTCACTATGCAGTCATGAACTCCTATGAGTATATTAGTACTGGGCTTAGAGAGTACA ACTTGGACAACAACATGGGCGGTTTTTACATTGCTCCTGCTTTTATGGACAAGCTTGTTGTTCACATCACTAAGAACTTCATGACACTGCCCAACATCAA GGTTCCTCTCATTCTTGGTGTCTGGGGAGGGAAAGGTCAAGGAAAATCTTTCCAATGTGAGCTTGTCTTCGCCAAGATGGGAATCAAGTGAGTTGTTGCT ATGCTAGTTCCCCTAATGAACTATTTAGACATAAAAATATTCATGAGATTTTTTATAATAGCTAGTTGTTGATAATTGACATACTATACTGCTAAACAAC ACATCAGTTAAACATATTAGAAACTAATTCCAAATTAAAAGTCTCTTTGGTGCATTTCAATTCAATACGTAACATAATTTTGGTGCACCAAAAATACACG ATGGAACAGGACAAAAATGATATTTTTTCTACTCGTTTCGGATCTACTCCACACCTTCTCGTCGAACCAAAATGTTATACTTTCAAACTTTTGTCCCGCT CTTTTATGTTTACAGAAACACCAGTGTCAAACAAAGAAATAACAACCATATTCTCTGTTCCATCATGTTCTGAAGTTCCTACCAAACACTAGTGTTCACA GGCTTCTCCAAATTTGATATCTTCCTTGAATATATGTATCGCTACTAACTTTCTAGTGCCTATGTTGTTGTAATTACATAACAGCCCTATCATGATGAGT GCTGGAGAGTTGGAAAGTGGAAATGCAGGAGAGCCAGCAAAATTGATAAGGCAAAGATACCGTGAAGCTGCAGATATAATAAGGAAGGGAAAGATGTGTG CCCTCTTCATCAATGATCTTGATGCAGGAGCTGGCCGTATGGGTGGAACCACACAGTACACTGTGAACAACCAGATGGTGAATGCTACACTCATGAACAT TGCTGATAATCCAACAAATGTGCAGCTTCCTGGTATGTACAACAAGGAAGAGAACCCGCGTGTGCCTATCATTGTCACTGGTAACGATTTCTCAACATTG TACGCTCCTCTCATCCGTGATGGACGTATGGAGAAGTTCTACTGGGCACCTACTAGGGAAGATCGCATTGGTGTGTGCATAGGAATCTTCCGCAGTGACA ATGTTCCTAAAGAGGATGTTGTCAAGATTGTTGACACCTTCCCTGGTCAATCCATTGATTTCTTTGGTGCACTCCGGGCCAGAGTTTACGACGACGAAGT GAGGAAATGGATTGGTGGTGTTGGTGTTGATGGCATTGGGAAAAGGCTTGTGAACTCAAAGGAAGGACCACCAACCTTTGAGCAGCCAAAGATGACATTG GAGACACTGTTAGGATATGGTAACATGCTTGTCCAAGAACAAGACAATGTGAAGAGAGTTCAATTGGCAGACAAGTACTTGAATGAGGCTGCTCTTGGTA ATGCTAATGAAGATGCTATAAAAAGTGGTTCTTTCTTCCAATCCTAAATGCCATAATTGGAGGCAAAGAAGCCTAACAAGTAAATATTCATGTGTTTTAA ATGTTGAAGTATGTACTGATCCAAATGTCTCTAGATTAAAGATGTGATGATGGATGGCACCTACTTATACACATTCTAAGCATTCCATTATGTGGAAAGA AATTATGCTTAGTTTGATATAATTGAATAATTTTGTTATCTTTTCATATTGGCTTGTTGTCCTTTGTAATTTTGAGTTAAATTGTGTTTGGTGGCTGTGA GATTTCTCGTTCTGCCTGTTCTGAGTGAGAGTTGGAGAAGTTGGATATAAGTGAAAATTAATGACCCAACAACACACATAGGGCCATAGAGGTTTTGAGT TAATATGTGTTTCAAATTGTGATGATACCGTCTAAGATTTCAGTTGTTGTGTTAACTGTCACAATTGTATCACTTTGCAATTAATGTGTAACATTGAATC ACAATGGTATGACCATATTGAGTCATGCGATCGCGTTAGATTACATATGTGTCGTATCAAGCTTCATCATATCATGTCACACCATATCAAGTTCAAAAAT ATTTT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_73854; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_134430
| Blastp | Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic from Malus with 92.37% of identity |
|---|---|
| Blastx | Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic from Malus with 92.46% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (103456062) |
| CantataDB | Link to cantataDB annotations (CNT0002861) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019419039.1) |
| Pfam | ATPase family associated with various cellular activities (AAA) (PF00004.28) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |