| Id Trinity | FTRINITY_DN58068_c0_g2_i3 |
|---|---|
| Name Transcript | Ll_transcript_135068 |
| Sequence | CAAACTACTTCATCTCTCTTACATTCACACACACCCTCTCTCTCTCTCTCTCTCTCTTCTTCTGTGACAACGATAAACGAAGTTTCCTTCCGCAAATTTT TAACCTTTGACTTCTAAGTCTCCTCTGTAATTTCCCTTTGATTCTCTCTCTTTTGCTTTCTGGGTCAATCAAAGTTCCAACCTTTTTCTCATTTCGATAG ATCTAATACCAAATCTTTTTACTTTCTTCTACTGGGTCGGGTTCCTCCTTTCTCAAATTCCTCATCAGTTTTGGGTTTAGTTTGATTATGCTGCTTTGGT GGCTCTGGAAATTCAAACTAATCGCTTCTTAATCTTTTTTGTTGTTGTTGTTGTTGTTGTAGTAGTAATAGTTTTGATGTGTTAAAATTTGCAGATATAT CATTTTTTTCTTGTTCCATAGGGTGATTTAAGATTTATATTGAAAGTTTGACTCTTTCTTAGATTTCATGTATTTGGTTAATATTTTGCAGCCACCACTT GTTAGATAAGTGTTTTTCATTCATAGTTTCTATTTATAAGATGCTTCTGCTTTTTTCCCTTTTTGGTTTTTGCTTCTATTAGTCATTACAAAAGTTATTG GAACTTAATTTGTGAGGGGACATTAAAGTGTGATGTCTTTGAATATGTTCTACCTTTCTAGGATCAATTAGGTTCTCAAGTGGATTTAATGGCTCATTCA GCTGAACCCTCATCATCTTTAAGCTTTACATCATCTTTATCGAATGGTTCAGTCAACCACAACATGTGTACTTCTTATGGCCCTGATCCCGGTCTTAACC TTGATGTCGTAAGTTTGAATAAGCTTAGCTCTAATTTGGAGCAGCTTTTGGTTGAATCTGGTTCTGATTATAGTGATGCTGATGTCGTAGTTGAAGGAAT TCCGGTCGGTGTTCATCGATGTATCCTGGCCTCTCGGAGTAAGTTTTTCAATGAATTGTTCAAGAAAGAGAAAAATTCATCAGAAAAAGAAGGGAAATTG AAGTATTTCATGAGTGATATGTTGCCTTATGGCAAGGTTGGATATGAAGCCTTCAACATATTTCTAGGCTATGTATATACTGGAAAACTAAAGCCCTCTC CGACCGAGGTATCTACTTGTGTTGACAATGTGTGTCTTCATGATTCCTGTAGACCTGCAATTAACTTTGCTGTGGAATTGATGTATGCATCATCTATTTT TCAAATACCGGAGTTGGTATCACTTTTCCAGGTAAACATTCTATTTTCATAATTTAATTAAGTGATAAGCCATGACTAGTTACTTGGTCCTTTTTAGCAA TACTCAATATCTTAATTCTGTAGTAATGATTTTCCTGTATGTCCATTATTATGCATTGTCAATATTGCAAATTGTGAGTTTAAGTTTAGAAATGGGGAAA AATGGAAATATCCGGTGGCACACATTAACGCCAAGAAAGAAACTGTGAATGATGAAGTTGAGGGATTTCATTTTAATTAGGATTAATTGTTAATTCAACC AAACTTTTATATCATTTGATTCTGGAGGAGTCTGAAATTGATCTTTATAATTAGTGTACCATATATGTTGCTTTACTTAGCCTCATACCTCGTACAGATC TCGTGCCTAGGCACTATGTATTTAACTTAGCTCCATAGTAGCTTTATCAAAGTATTGACTATTGAAAACAATGGACTCTATTTGATGTGCTAATCCTTGG AAAAAGTACATTCAAATTAACTTTGCATTTAAATTACTACCAATGTTGTGTCTGATCAAGCTTGAGGGGCAAGAAACTACTTAATACTTTAACTTTTGCA GAGACGTCTTCTTAACTTTATAGGAAGGGCACTTGTAGAAGATGTTATACCGATTCTCATGGTTGCTTTCCATTGTCAATTGAGTCAACTTGTCACTCAA TGTGTTGACAGGGTGGCACGATCAGACCTTGACTGGATCTCTATTCAGAAAGAGCTTCCCTTTGAGCTATCAGAAAATGTTAAATTGCTCCGCAACCCTA AAAAAGAAGTTGAAAATGATGATCCTCCTGTAGTGGACACTATATCTCTAAAACGAATCGGTAGAATACACAAGGCATTAGACTCAGATGATGTCGAGCT TGTTAAACTTCTTTTGAATGAGTCAGACATCACTTTAGATGGAGCCAATGCTCTCCATTATGCTGCAGCCTACTGTGATCCGAAGGTTGTTTCTGAGGTA CTTAGTTTGGGTCTGGCTGATGTCAATCTTCGGAATTCTCGGGGATACACGGTTCTTCACATTGCTGCCATGCGTAAGGAGCCTTCCGTTATAGTGTCAC TTCTTACAAAAGGGGCTATTGCATCAGATTTGACATTTGATGGTCAGAGTGCTGTTAGTATTTGCAAGAGGTTGACAAGGCCAAAGGATTATCATACAAA AACAGAACAGGGGAAAGAAACAAACAAAGACCGGATATGCATCGATGTCCTTGAAAGAGAAATGCGGAGGAATCCATTGGCTGGGGATGCCTCTATCTCA TCCCACACAATGGCCGATGATATCCACATGAAGCTACTATACCTTGAGAACAGGGGAACTTGCATACTTTTTTGAGGAAAATCTATTGTTGATAACTGAT TATACTTTGTTCATGGGATATTTATACTCAAACCATCAAATAAGAAGGTAATACTTACTGCCCATTGCAGTGGCATTTGCGAGGGTATTGTTCCCTTCGG AAGCCAAACTAGCCATGGACATCGCACATGCCGAGACAACATCGGAGTTTGCTGGTATTTCTGCACCTAAAGCTTCAAATGGAAGCATCAGGGAGGTTGA TCTCAATGAGACTCCCATAATGCAAAACAAAAGACTTCTTTCTCGGATGGAAGCCCTAATGAAAACAGGTAACTCCAGCCTTTGTTAAACTTAAATTCAA GACATGCTTAAGTATATTGTTTGTTCTGAAGCCAATTGCTTGGATACAAAGTCTTTTGTATTTTCTCTTTCCCTTCTTCCTCGGTGAAGCTATCAATTGT TTACCTTACCTTTATCGGGAATCTCGTGGTCACTTTTTATCTTTATGCTTCTCATTTATCAAAATTCATTGTTTTCCTTGATAAAATTAGAAACATGCAT GAAGATTATTTAACATGGAAAACTGCACAATTCATGCAAGCGTAGTGTAATGGCATACTTCATTACTTAAGCCGATCAAGTATCTATTCCTTACAAAATA TCTCTTTGTTTCCACCCTTTTAGTTGAATCAAAATATCTCACTTTTTATCCCTCATGTCCTACTTTGTTCTATTTATAAAATATACCATGTTCTATTCTA TGTCTACCAAACATGACCTAAGGAGAATGACTAATGTTATGTTATTGTTAAAAGTCTAGATTATAATGGATCCTACATCTTACAGATGCATAATCCTTAA AATTATTTTGTTAGAAGTTTATTTTCCTCTTGTTACTCAAGTAGTTTGTGTTTTACTACATTTCTGATACCAACCATCTTCGGTTCTTATGGTTGTTGTG ATGATGGCAGTGGAGATGGGGCGACGCTATTTTCCTCATTGCTCGGAAGTGTTAGATAAGTTCATGGAAGATGACCTGCTTGATTTATTTTATCTCGAGA AGGGAACCCGAGAAGAGCAAGGAGTGAAGAGGAAGCGTTTCATGGAGCTCAAAGATGATGTCTACAAGGCTTTCACCAAGGACAAGGCTGGGTTCAGCCG CACCGGAATTTCAACTTCATCATCCTCTTCATCCCTCAGAGATTCTGTACATTACAAAGCTAGGAAAGTGTGAAAAGCATAGTTTCTCTATGACTTGCAT ACACATATATAGTGCAAATTTTAAATGGTGATATAGCTACCATCTCTTCTGTATCTGAAAACACAAAGTGGGAAAGTTGATCTCTTACTATCTTTTTTGT AATCAACTTGTTCAAGTATTTTGAAAATAATCTCCTCTCCCCTTTACAGTACAGATTATGTAAGAAATTACATGGAGTCAATTTTTTGTATTGCTATTTC CTATGATACTTTTTGATATACTCTTTAGCTATAAGATATTAATAATTTAAAACTTGTTATAGTAAATCATTGTGATGAAGTTACTGTTCTGTTGTACTTA ATTCCATATATCAACTATTGTTTTATCAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_73888; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_135068
| Blastp | Regulatory protein NPR4 from Arabidopsis with 64.17% of identity |
|---|---|
| Blastx | BTB/POZ domain and ankyrin repeat-containing protein NPR2 from Oryza sativa with 62.75% of identity |
| Eggnog | Ankyrin Repeat(COG0666) |
| Kegg | Link to kegg annotations (AT4G19660) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019419190.1) |
| Pfam | Ankyrin repeats (3 copies) (PF12796.6) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |