| Id Trinity | FTRINITY_DN58079_c2_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_134496 |
| Sequence | ATCCTTGTTCACCGTACTAGAAAGGAAAAGAGAAAATATTTAAAATTGAAGGAGGACATCATCAAATGTTTGATATGAAAACCATATCTCAGTTAAGGTT TGTATTTTAAATCGTTGATGTCTCCCGCCGCCACTACCTCACCTCAACCGCCACCTCTCCACGGTTAGCATGCTCTTGCGCCGCCGTCCATTAAACCCCA ACCCATTTCCACCACTCCTCACCACCACTCAAATCACCTCCTCCTTTTCCACCACCACCCCTCCCTCTCCAATCACAATCACACCAACCCTCTTAAAACA ATGCAATTCCTTAACCAATGCCAAACTCTTTCACCAACAATTAACCGTTCAAGGCCTTATCAACATTTTCGCACCAAACCTCATAGGAACATTCTTAGCC TTAAACAACACTTCCCATTCCATTTCACTTATAAACCATTTTCTTCAACCATCTTCATATTATGTCTTTTGGTGGAACCAACTTATAAGGTCTGCTCTTC ATCTTGAAGCTCATCATCTTGTATTGGATTTTTATCATCAAATGAGGGCACGTGGTTGGACACCTGATCATTATACTTTTCCTTTCGTTTTTAAAGCTTG CGGCGAGATAATGGCTTCGTCGTATGGTGTATCGCTTCATGCTGATGTGTTTCGAACTGGGTTTGAGTCTAACGTGTTTGTTTGTAATGCTGTGGTTGCT ATGTATGGGAGGTTCGGCGCGATAAGAGATGCACGGAAGGTGTTTGATGATTTGTGTTATAGAGGGGTTGAGGATTTGGTTTCGTGGAATTCTATTGTGA GTAGTTATGCGCGGGTGGGTGATGTTGGTAGTGCGATTAAGATGTTTGGTAAGATGAATGGTAAAGGGTTGGTGTTGCCTGACGCGGTTAGCCTTGTTAA TGTGCTACCTGCTTGTGCTTCATTGGGTGCTTCGTTGCTGGGTAAAGAGATCCATGGTTTTTCTATTAGGAGTGGGTTGGTGGATGATGTGTTTGTGGGT AATGCGATGGTTGATATGTATGCCAAGTGTGGGAAGATGGATGAGGCTAGTATGGTTTTCGAGAGGATGAAGATTAAGGATGTTGTTTCTTGGAATGCTA TGGTGACTGGATATTCTCAGACCGGTAGATTTGAAGATGCTCTTTCTTTGTTTGAGAAGATGAGGGAGGAAAATATTGGGTTAGATGTTGTGACGTGGAC TGCTGTTATTGCGGGGTATGCTCAGAGAGGGCATGGTTGTGAAGCTCTGGACGTGTTTCGCCAGATGTGCAATTGTGGATCTCGGCCAAATGTGGTCACT CTCGTGTCTTTACTTTCAGGTTGTGCATCTGTTGGAGCATTGCTTAATGGAAAAGAAACTCATTGTTATGCTATCAAATTTATCCTCTACTTCAATGGAC ACAATACGAGAGACGATCTGATGGTGATTAATGGTCTAATTGACATGTATGCTAAATGCCAAAGTGTAAACATGAGTCGTACAATGTTTGATTTAATATC TCCAAAAGATAGGGATGTGGTTACTTGGACTGTGATGATTGGCGGGTATGCACAGCATGGTGACGCCAACCCCGCACTACAACTTTTCTCTGAAATGTTC AAAATAGGCAACTCTATAAGGCCTAATGATTTTACATTATCTTGTGCACTCATGGCCTGTGCTCGTATGGCAGCATTGAGGTTTGGTAGGCAAATTCATG CTTATTTGCTGCGCAACAATTACGATTCAGACAATCTTTTTGTGACTAATTGTCTCATAGACATGTATACTAAATCTGGGGATGTTGATACTGCTCAAAT TGTTTTTGATAACATGCCAGAGAGAAATTCTGTCTCTTGGACGACTTTAATGACAGGTTATGGCATGCACGGACGCGGTGAAGATGCTCTCCGGGTTTTT AATGAGATGAGGAATATGGGTTTAGTGCCTGATGGCATAACCTTTCTTGTTGTGCTTTATGCGTGTAGCCATTCAGGAATGGTGGATCATGGGATCAATT TATTTTATAGAATGAGCGACGATTTTGGGGTTCCTCCTAAAGAAGAGCATTATGCTTGCATGGTTGATCTATTAGGCCGTGCTGGTCGCTTAGGTGAAGC AGTGAAACTCATTAATGGCATGCCCATTGTACCAACTCCAGTAGTGTGGGTGGCCTTGCTCAGTGCTTGTCGGATGCATTCAAATGTGGAAATTGGGGAA TTTGCTGCAAATCGATTGTTAGAGTTGGAGTCAGAGAATGATGGGTCATACACATTACTCTCAAACATATATGCTAATGCCAAACGTTGGAAAGATGTGG CTAGGATTAGATATTTAATGAAACATACAGGGGTCAAGAAAAGGCCTGGTTGTAGCTGGGTCCAAGGAAGAGAAGGCTTTGCGACCTTCTATGTGGGGGA CCGATCTCACTCACAATCTCAGCAGATATATGAAATACTTGCAGACTTGATTCAATCCATTAAAGCCATTGGGTATGTTCCACAGACAAGCTTTGCTCTT CATGATGTAGATGATGAAGAAAAGGGTGACTTGCTTTCTGAACATAGTGAAAAGTTGGCTCTTGCCTATGGCATCCTAACATCACTTCCAGGGACACCGA TTCGAATCACGAAGAACTTACGCATTTGTGGTGATTGTCATAGTGCCATAACTTACATATCCATGATTATTGATCACGAGATCATACTAAGAGATTCAAG TCGCTTCCATCATTTCAAAAACGGATCCTGCTCATGCAAAGGGTACTGGTGAGAATGGAGTCAAGCAAATCCATTTAATGTATAACATTTTTGCAATGAC AGGTAATGATCCCTTTGAGTACTGTGACATTGTCACAACAACAACCAATAGAATTTGACCGGTCCTAGAGCCGGTATGATCTTTGACAGTTTTATGGAAG GGACATAAACCACCTAAGAAGGGCCGGACTGAGAATGCAGTTTGTGATCTTGAAGACAATCAACCTCACAGTGTTCCCCTCACTTTTTCTGGGTGGTCCT CATTCCTCACAATCACCAGAGTGGTTCCAACGTGGCTTTGAAACAGTCCATGACACCTGAAATCAAGGTATACGCCAAGCAAGTTAAGGCCACTGCAGTT GCGCTTAGAAACTACTTGACTACAGTCCAGTCATTGGTGGAGGAACTGAGAACCATGTTGTGTTGTGCGATCTCTACCTTCTCGGCTTAACCGGCAATGA GGTCGAGAAACATTGTGATCTCTGTAACATTATTATGAAAATAAATGCTGTTTTTGGCGATAGCAATGCATTGGCTCCTGGAGTAGTAAGGATTGGGGAA GAGAGAGTGTACTACTTGGGGTTTGAAGGAATTTGATTGAGGATGTGTTTTAATGTTTTACCAAAGGAGTATTATTAGTTAGTTCTAGCCCAACATGCAG GGAGGCATGGTTAATCATTTGGAACATGGCACAAATTTTTTCTTTCATTGGCAAACTGCAAATTGTGGAATAAATATGTCACCAACTAGACTTAGTTCCA TTCCACGCATTGGTGATTGATTAATGCCTGCACCAAAATTAGCTGGTTCAAACATGTTCATTAAATGAAGATGATAGCATT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_73979; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_134496
| Blastp | Pentatricopeptide repeat-containing protein At5g16860 from Arabidopsis with 60.33% of identity |
|---|---|
| Blastx | Pentatricopeptide repeat-containing protein At5g16860 from Arabidopsis with 61.61% of identity |
| Eggnog | Pentatricopeptide repeat-containing protein(ENOG410Z7Z7) |
| Kegg | Link to kegg annotations (AT5G16860) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019420641.1) |
| Pfam | PPR repeat (PF01535.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |