Ll_transcript_134615

• Id Trinity: FTRINITY_DN58085_c0_g1_i1
• Name Transcript: Ll_transcript_134615
• Sequence: CGTTGAAGTATTCCCTGTTATGAAGAGAGGAGTTTAATTTTGTGAATTGACATAATTGGATTCACATCGAAAGAGGAAGGGAGAGAGAGAAGATGAGTAG GAACGATTCGAAATACTTCTCTACCACTAAGAAAGGTGAAATCCCCGAGCTCAAAGAAGAGCTCAATTCTCAGTACAAGGACAAAAGAAAAGATGCGGTG AAAAAGGTTATTGCAGCAATGACTGTTGGGAAAGATGTATCGTCATTGTTCACGGATGTGGTGAATTGCATGCAAACAGAAAATTTGGAACTTAAAAAGC TAGTCTATTTGTATCTCATAAATTATGCTAAGAGCCAGCCTGACCTAGCAATTCTTGCAGTCAATACATTTGTCAAGGATTCACAAGATCCAAATCCTTT GATTCGTGCCTTAGCTGTGAGGACAATGGGCTGCATTCGTGTTGATAAAATTACTGAGTATCTATGTGATCCCCTTCAAAGATGCCTGAAGGACGATGAT CCATATGTTCGTAAGACAGCAGCCATTTGTGTTGCTAAACTTTATGACATAAATGCTGAGTTAGTTGAGGACAGGGGTTTTTTGGAGTCCCTGAAGGATT TGATATCTGATAATAATCCAATGGTTGTAGCCAATGCTGTGGCAGCCCTTGCTGAAATTCAGGAAAACAGTACTAGACCCATCTTTGAGATCACTGTTCC CACCCTGACAAAGCTCCTTACTGCATTAAATGAGTGTACAGAATGGGGTCAAGTTTTTATATTGGATGCTCTTTCAAGATACAAGGCTGCTGATGCACGT GAAGCAGAAAATATAGTAGAAAGAGTTACTCCACGATTACAGCATGCAAATTGTGCAGTTGTCCTGTCAGCTGTTAAGATGATCCTTCAACAAATGGAGC TTATCACCAGTACTGATGTAGTTCGGAATCTTTGCAAAAAGATGGCCCCTCCTCTTGTTACGTTACTCTCTGCGGAACCTGAGATACAATATGTAGCATT GCGTAATATCAATCTTATAGTACAAAGAAGACCAACAATTCTTGCTCATGAAATTAAGGTGTTCTTCTGCAAGTACAATGATCCTATCTATGTGAAAATG GAAAAGTTGGAAATTATGATAAAACTTGCTTCAGACCGAAATATAGACCAGGTTTTATTGGAATTTAAAGAGTATGCTACTGAAGTTGATGTAGATTTTG TTAGAAAGGCTGTACGTGCAATTGGTCGTTGTGCCATCAAATTAGAAAGAGCAGCTGAACGTTGCATTAGTGTTTTGCTTGAGTTGATCAAGATAAAAGT TAATTATGTGGTTCAAGAGGCAATCATTGTTATCAAAGATATATTTAGAAGATATCCTAACACATATGAGTCCATAATTGCTACACTTTGTGAGAACTTA GACACCTTGGATGAGCCGGAAGCCAAGGCATCAATGATCTGGATTATTGGTGAATATGCGGAAAGAATTGACAATGCTGATGAACTTCTTGAAAGTTTCT TGGAAAGTTTCCCTGAAGAACCCGCCCAAGTCCAACTACAATTGCTGACTGCTACAGTCAAACTTTTCCTTAAGAAGCCAACTGAGGGACCACAGCAGAT GATTCAGGTTGTTTTGAACAATGCCACAGTGGAGACAGATAATCCGGATTTGCGAGATCGTGCATACATATATTGGCGTCTCCTTTCAACTGACCCCGAG GCAGCTAAGGACGTTGTGTTAGCTGAGAAGCCTGTTATAACTGATGACTCAAATCAGCTTGAACCTTCTCTACTTGATGAGCTTCTTGCCAATATTGCTA CATTATCTTCTGTTTATCACAAGCCCCCAGAAGCTTTTGTAACTCGTGTACTCTCTTCAGCTCAGAGAACTGAAGAAGAAGACTATCCCGAGGGAAGTGA AACAGGGTATTCTGAATCATCTGCAAATCCTACAAATGGTATTGCATCACCGCCTGCTACCAGGCAATCAGCACTTGCATCTGCAACAGCAGCACCAGCT ACACCTCCATCTGTTGTACCTGTGCCAGATTTACTTGGCGATTTAATCGGCATGGATAATAATTCAATTGTTCCTCTGGATCAGCCAGTTACTCCTACTG GGCCTCCATTGCCTATTTTAGTACCTGCTTCAACTGGTCAGGGTTTACAAATCAGTGCACAAGTGGTTAGACGGGATGGTCAAATATTTTACAGTTTGTT GTTTGAGAACTCCACTCAGGTTCCACTTGATGGCTTTATGATTCAATTCAACAAGAACGCATTTGGTCTTGCAGCTGCTGGACCCCTACAGGTTTATTAT TTTCACATGATTTTTACCTGGATGCTTTTGTCAAATTAATCTCTAATAGATTATTCATTGCATCAGGTTCCACAAATACAACCTGGAACATCAGCTAGGA CACTCCTTCCCATGGTCCTGTTCCAGAATCTGTCCCAAGGTCCTCCTAGCTCAGTTTTACAGGTTGCTGTGAAAAACAATCAACAGCCTGTGCTTTATTT CAATGACAAATTCTCATTGCATGTATTTTTTAGTGAGGATGGTAGAATGGAACGTTCGAATTTCTTAGAGACATGGAGGTCCCTTCCTGATTCAAATGAG ATTTCCAAGGACTTCCCAACCATCGTGCTTAGCAGTGCTGAAGCAACACTGGACCGGCTTGCTGCATCAAACATGTTCTTTATTGCAAAGCGCAAGAATG CGAATCAGGATGTGTTTTACTTCTCAGCTAAACTCCCTCGAGGGATACCATTCTTGATTGAACTTACCACTGTGATTGGGAACCCTGGTGTGAAGTGTGC AATCAAGACTCCAAACCCTGAAATGTCTGCACTTTTCTTCGAAGCCATTGAGACTCTTCTCCTGGGTTAAAATGATATCTAAAATTACTTGTCTTCTATA ATTTTTGTTTATATATTGTCTTTGTTGGCATAATTGATAAATATTCTGGATAGGCGTGTTGTATCTTATTTGGAAAAAAAAATCCCATTGATTATCTATC ATATGCCCTTGTCAGCTATATTTCAATTTCACTGCTACTGCCATTTTGGCCTTCATTGAAACCCTGCAATATAATAGTGTCCTGATTACATTGATGCTG
• Tissue: flowers
• Gene name: LI_gene_74025;
• Additional information: details;

Expression of Ll_transcript_134615

FPKM

• FPAB: 0.5
• FPNAB: 0.3
• LF1: 0.5
• LF2: 0.2
• LF3: 0.7
• LF4: 0
• UF1: 0.1
• UF2: 0.1
• UF3: 0.1
• UF4: 0.1

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_134615

• Blastp: Beta-adaptin-like protein C from Arabidopsis with 89.92% of identity
• Blastx: Beta-adaptin-like protein C from Arabidopsis with 83.75% of identity
• Eggnog: The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins(COG5096)
• Kegg: Link to kegg annotations (AT4G23460)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019444618.1)
• Pfam: Adaptin N terminal region (PF01602.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;