| Id Trinity | FTRINITY_DN58085_c0_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_134616 |
| Sequence | GGAAACAGTTCTAATATTTTTGTTGCGCCTGTTACATGCTTAATTTGAATGTGCATCATTTGCATCTGATTTCAGGTATGATTTTGTTCCATTAGGTCTA TATGTTTTGATCACCCATCTTTGGTAAAGATTATAACCATAATAAAATAAAGTGGCAGTTGAGGAAATCTGCTATTATCTACAATTGCTTCACTCGCCAC CTAGTGGGATTAAAGCTTGATTGTTATATTATCTAGAAGTGCTTCTCTATCCTTTTCTTCACTTCTACCTAAGTACCTATTATATCCCGATACGCATCCA TTTCTATTTTTATCTCTTCCTATTTGTGCAGATATGCATAAGTGGTGAAAAGTGTAAAAACACTTTCTAATGGTATATGCCTGGGCCACTTTGTAGTTTG ATAGGTTCTTCTGTTTTTTTTTGTAGATCAACCAAACACTATTCAACATGTTCTTCTGTTTTTAAGCTGTTTTATTGATTGTGAAATTTATTGGTTATTG CTTTACTTGTCATTGTGGATTGTCTTTGTTCATCTATGATCACATACTTAATTTATCTTAACAGCACTTGCTTTTGCTTCACATGCCAGATGGGGTCAAG TTTTTATATTGGATGCTCTTTCAAGATACAAGGCTGCTGATGCACGTGAAGCAGAAAATATAGTAGAAAGAGTTACTCCACGATTACAGCATGCAAATTG TGCAGTTGTCCTGTCAGCTGTTAAGATGATCCTTCAACAAATGGAGCTTATCACCAGTACTGATGTAGTTCGGAATCTTTGCAAAAAGATGGCCCCTCCT CTTGTTACGTTACTCTCTGCGGAACCTGAGATACAATATGTAGCATTGCGTAATATCAATCTTATAGTACAAAGAAGACCAACAATTCTTGCTCATGAAA TTAAGGTGTTCTTCTGCAAGTACAATGATCCTATCTATGTGAAAATGGAAAAGTTGGAAATTATGATAAAACTTGCTTCAGACCGAAATATAGACCAGGT TTTATTGGAATTTAAAGAGTATGCTACTGAAGTTGATGTAGATTTTGTTAGAAAGGCTGTACGTGCAATTGGTCGTTGTGCCATCAAATTAGAAAGAGCA GCTGAACGTTGCATTAGTGTTTTGCTTGAGTTGATCAAGATAAAAGTTAATTATGTGGTTCAAGAGGCAATCATTGTTATCAAAGATATATTTAGAAGAT ATCCTAACACATATGAGTCCATAATTGCTACACTTTGTGAGAACTTAGACACCTTGGATGAGCCGGAAGCCAAGGCATCAATGATCTGGATTATTGGTGA ATATGCGGAAAGAATTGACAATGCTGATGAACTTCTCGAAAGTTTCTTGGAAAGTTTCCCCGAAGAACCTGCGCAAGTCCAACTACAATTGCTGACTGCT ACTGTCAAACTTTTCCTCAAGAAGCCAACTGAGGGACCACAGCAGATGATTCAGGTCCTGCCTCATAATGCATGTTTATTCATATAGATAGGATTAACAT GCCACTATGCTAAATGTATTGATCTTTCGATGTCAAAATCAAATTGGACAACTCTTGCACCAAGTATGAAAACGTCTTGTTAAGTGGCACATATAGCAAT CTACAGTTTTAATGTGAATAATTATATATTATAACTTTGTGTGGTAGTTGTAATTTATAGTTTGTACATGTGTAGATAGTGACATAACTTTTCTATCCCT CCCAAAACAGAATCCCTTCATGATTGAATAGTGCATCTTTGAGATTATATGTAGAAAAAATTCTATAACTATCGGATTCAAATTTTGAAAGACAAATCTG CCATTTTATCAGTATATGTCTTGGTTAATGACTCAAAAACCCTCCTTTCTGTATTGTCTTTTTATTATTTTCCCACTATGGAAGTTGTTTGCACATTCTT CAGG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_74025; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_134616
| Blastp | Beta-adaptin-like protein C from Arabidopsis with 96.41% of identity |
|---|---|
| Blastx | Beta-adaptin-like protein C from Arabidopsis with 93.55% of identity |
| Eggnog | The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins(COG5096) |
| Kegg | Link to kegg annotations (AT4G23460) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019444618.1) |
| Pfam | Adaptin N terminal region (PF01602.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |