Ll_transcript_134620

• Id Trinity: FTRINITY_DN58085_c0_g1_i4
• Name Transcript: Ll_transcript_134620
• Sequence: CGTTGAAGTATTCCCTGTTATGAAGAGAGGAGTTTAATTTTGTGAATTGACATAATTGGATTCACATCGAAAGAGGAAGGGAGAGAGAGAAGATGAGTAG GAACGATTCGAAATACTTCTCTACCACTAAGAAAGGTGAAATCCCCGAGCTCAAAGAAGAGCTCAATTCTCAGTACAAGGACAAAAGAAAAGATGCGGTG AAAAAGGTTATTGCAGCAATGACTGTTGGGAAAGATGTATCGTCATTGTTCACGGATGTGGTGAATTGCATGCAAACAGAAAATTTGGAACTTAAAAAGC TAGTCTATTTGTATCTCATAAATTATGCTAAGAGCCAGCCTGACCTAGCAATTCTTGCAGTCAATACATTTGTCAAGGATTCACAAGATCCAAATCCTTT GATTCGTGCCTTAGCTGTGAGGACAATGGGCTGCATTCGTGTTGATAAAATTACTGAGTATCTATGTGATCCCCTTCAAAGATGCCTGAAGGACGATGAT CCATATGTTCGTAAGACAGCAGCCATTTGTGTTGCTAAACTTTATGACATAAATGCTGAGTTAGTTGAGGACAGGGGTTTTTTGGAGTCCCTGAAGGATT TGATATCTGATAATAATCCAATGGTTGTAGCCAATGCTGTGGCAGCCCTTGCTGAAATTCAGGAAAACAGTACTAGACCCATCTTTGAGATCACTGTTCC CACCCTGACAAAGCTCCTTACTGCATTAAATGAGTGTACAGAATGGGGTCAAGTTTTTATATTGGATGCTCTTTCAAGATACAAGGCTGCTGATGCACGT GAAGCAGAAAATATAGTAGAAAGAGTTACTCCACGATTACAGCATGCAAATTGTGCAGTTGTCCTGTCAGCTGTTAAGATGATCCTTCAACAAATGGAGC TTATCACCAGTACTGATGTAGTTCGGAATCTTTGCAAAAAGATGGCCCCTCCTCTTGTTACGTTACTCTCTGCGGAACCTGAGATACAATATGTAGCATT GCGTAATATCAATCTTATAGTACAAAGAAGACCAACAATTCTTGCTCATGAAATTAAGGTGTTCTTCTGCAAGTACAATGATCCTATCTATGTGAAAATG GAAAAGTTGGAAATTATGATAAAACTTGCTTCAGACCGAAATATAGACCAGGTTTTATTGGAATTTAAAGAGTATGCTACTGAAGTTGATGTAGATTTTG TTAGAAAGGCTGTACGTGCAATTGGTCGTTGTGCCATCAAATTAGAAAGAGCAGCTGAACGTTGCATTAGTGTTTTGCTTGAGTTGATCAAGATAAAAGT TAATTATGTGGTTCAAGAGGCAATCATTGTTATCAAAGATATATTTAGAAGATATCCTAACACATATGAGTCCATAATTGCTACACTTTGTGAGAACTTA GACACCTTGGATGAGCCGGAAGCCAAGGCATCAATGATCTGGATTATTGGTGAATATGCGGAAAGAATTGACAATGCTGATGAACTTCTCGAAAGTTTCT TGGAAAGTTTCCCCGAAGAACCTGCGCAAGTCCAACTACAATTGCTGACTGCTACTGTCAAACTTTTCCTCAAGAAGCCAACTGAGGGACCACAGCAGAT GATTCAGGTTGTTTTGAACAATGCCACTGTGGAGACAGATAATCCTGATTTGCGAGATCGTGCATACATATATTGGCGTCTCCTTTCAACTGATCCTGAG GCAGCTAAGGATGTTGTGTTAGCTGAGAAGCCTGTTATAACTGATGACTCAAATCAACTTGAACCTTCTCTACTGGATGAGCTTCTTGCCAACATTGCTA CATTATCTTCTGTTTATCACAAGCCCCCAGAAGCTTTTGTAACTCGTGTACTCTCTTCAGCTCAGAGAACTGAAGAAGATGATCCCGAGGGAAGTGAAAC TGGGTATTCTGAGTCATCTGCAAATCCCGCAAATGGTGTCACATCACCACCTGCTGCCAGACAATCAACACCTGCATCTGCAACATCTGCACCCACTACA CCTCCATCTGCTGCACTCGTGCCAGATTTACTTGGTGATTTGATAGGCATGGACAGTAATTCGATTGTTCCTCTTGATCAGCCAGCTACTCCTACTGGAC CTCCATTGCCTATTGTAGTACCTGCTTCAACTGGTCAGGGTTTACAAATCAGTGCACAACTGATTAGACAGGATGGTCAAGTATTTTACAGTTTGTTGTT TGAGAACTCCACTCAGGTTCCACTTGATGGCTTCATGATTCAATTCAACAAGAACACATTCGGTCTTGCAGCTGCTGGACCCCTGCAGGTTGCACAAATA CAACCTGGAACATCAGCGAGGACACTCCTTCCTATGGTAATGTTCCAGAATATGTCCCAAGGTCCTCCTAGCTCACTTTTACAGGTTGCTGTGAAAAACA ATCAACAGCCCGTGCAGTATTTCAATGATAAATTCTCATTGCATGTATTTTTTAGTGAGGATGGTAGAATGGAACGTTCCAGTTTCTTAGAGACATGGAG GTCTCTTCCAGATTCAAATGAGGTTTCCAAGGACTTCCCAACTATCGTGCTTAGCAGTGCCGAAGCAACACTGGACCGGCTCGCTGCATCAAACATGTTC TTTATTGCAAAGCGTAAGAATGCGAACCAGGATGTGTTTTATTTCTCAGCTAAACTCCCTCGGGGGATACCGTTCTTAATTGAACTTACCACTGCGATTG GGAACCCTGGTGTCAAATGTGCAATCAAGACTCCAAACCCTGAAATGTCTTCACTCTTCTTTGAAGCCGTTGAAACTCTTCTGGTGGGTTGAAATGATTT CTTTTTTTCTCGATTTTTGGTTATACATTGTTTTTGTTAGCATGTTTGATAAATATTCTGGACTGGAGTATTGTATCATGTGAAATTTTTTCCCACTGTT TATCTATCATATGCCCTTGCCAGTTGGCAGCTGTATTTCATTTTCACTATTGCCATTTTGAACTTTATTTTAAACCTGCAATTGTGCTTTTGGGAATGTC TTTTGTAGAGAGGTTTGATGGCCTGTAATATAATAGCTTTCTGATTGCATTGCTCCTCTTACCATTTTATATCAACTTATTGATTATTCATTTCAAAGCA TTATTGGG
• Tissue: flowers
• Gene name: LI_gene_74025;
• Additional information: details;

Expression of Ll_transcript_134620

FPKM

• FPAB: 1.7
• FPNAB: 2.7
• LF1: 1.6
• LF2: 1.3
• LF3: 0
• LF4: 0.3
• UF1: 0.8
• UF2: 1.2
• UF3: 0.9
• UF4: 1.9

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_134620

• Blastp: Beta-adaptin-like protein C from Arabidopsis with 86.3% of identity
• Blastx: Beta-adaptin-like protein C from Arabidopsis with 85.97% of identity
• Eggnog: The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins(COG5096)
• Kegg: Link to kegg annotations (AT4G23460)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019423358.1)
• Pfam: Adaptin N terminal region (PF01602.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;