Id Trinity | FTRINITY_DN58089_c0_g1_i41 |
---|---|
Name Transcript | Ll_transcript_136959 |
Sequence | CTCTAATATTAGATTTTATTTGGGGACGAGAAGAGGAAGCGTGAGTAATATTTAAAGTTTGAATAGTACCTAGTAATTTAAATGTAGATCCTATTTAAAG TTTGCATTAAAATGCCAAAAATTAAAAGCAGTGGATGTGAAATAACGCTGAAATCAAGAAAAAAGAATAGCCATATCATTTCATAAATTACTTTTCTTCT TTGCTCCGCCACACTCAGAGGGTGGGTCAACCGCGTCGGAGATGACCCAAACCCTCTCTGTTTCTCTCACCACCTTCTCACAAAAACCCTAGAATTTTAT CAATTCCCCAATTCTCTCATTTCAATTTCTCTATCACAATTCCCCATTTCGGTTTAATTTATCTCTTCTTGTTTCCACTTCAACGCAACTATGTCATCCG AGATCGAAGAGGTTCAATCCCGAGATCAACAATTGCCATCGGCTTCGGCGTCATCCTCCGCCGGCGGTGAAGTCGACGATGAGAGCCTCCGCAACGATGT ATACGCGGCGGCAGCTTACGGGGATTTGGAGAAGCTGCATCGATTGGTGGAGCAAGAGGGTTGCACCGTCACCGAGCCTGATGGGTTGGGTTACTATGCG CTTCAGTGGGCCGCACTCAATAATCGCAGTGCCGCTGCTCAGTATATCATTGAGCATGGGGGAGATATAAATGCGATAGATCATACTGGCCAGACAGCAT TACATTGGAGTGCAGTTCGAGGTGCTATCCAGGTTGCAGAGCTTTTACTCCAAGAGGGTGCTCGAGTGAATGCTGCTGATATGAATGGTTATCAGACAAC ACATGTTGCTGCTCAATATGGTCAGACGGCTTTCCTTTACCATGTTGTTTCGAAATGGAATGCTGACCCCGATGTTCCTGATAATGATGGAAGAAGTCCC TTGCATTGGGCTGCTTACAAAGGTTTTGCCGATTCTATACGCCTACTGTTATTTCTTGATGCACACAGGGGACGTCAAGATAAAGAGGGTTGCACGCCTC TTCACTGGGCTGCTATCAGGGGTAACATGGAGGCCTGTACTGTGTTAGTACAGGCTGGCAAGAAGGAAGACTTGATGGTGACTGATAATACTGGCCTTAC ACCAGCACAACTTGCATCAGATAAGAATCACAGACAAGTTGCTTTTTTCCTTGTAGGTGTTTTATAAAGAAAATATTATACTTTAGTTAGTAATGCCATT TCGATGGCAGTTTGGCATCCCTTGTTCCAAATGTATATTTGCATGCTTTTGAGAATCAGACTGCCTGGCTTGCCTGAAAAGCATTTTTGTTCATTGCATC TGTAGAATATGTACTTTAGTGGAGTCTTATGTGTGTTTTCTTAATGAAGAGACACACTTTCAATGTTGATGTGCTAATTATACTTTGCATCCTATCTCTG TTTGGTAATACTAATGTGGATTGCATGCTTCTGCCACAATACATATGGGACATCTGGATCTCTGAATCTCTGATAATAATGTATTTGAAAATTTAAATGC CACTATTGCATATCACATATTGCAGCATGAACCTCCCTTCAAATTGAAATCTGTTGTTTAGAAAAGTGAATGATGAATGTTGAGTTGTTGATTATGTCTT GACAAAGTTTTAAAAACTAGTCTTATTCCATTTCTGTTCGAAAACATCTGCAGCTCATAAAAGAACTGACATATCAAAGTTATTGATATTATGAATTGTA TGGTGTCTTAACTCTTATCCTTTACAAAATATACATAGTAATAGTAAACTGGAAAAAAATAATTGCTCAAAAAGATAATATCTTGTCCTCTGTGTACTTC TGAGTTGATACATTTTAAGGTCATTACCAATTATAAAGAGACTCTTAGGTTCTATCTGTGTCATGATTGTCTGAAATTTTGAAACGGAGTAGTTATAACT TATAAAGACTGGTGGTACATCAGCGTCTCTGTTATGGCTTTGCTTTTTTACTTACATTGATATAAATTTGTTGCTTCTAAAGACATGCTTTTCAAAGATT GCCACCTTGTTCTTGTAACTGATGCCAGATCTCATATCTTAACCAATTTAATAATGAATGTAAGCCTTTTTACCTTGCTAAATCTGTTATGTAGGGAAAT GCTCGAAGACTGCTTGACAAACGCTTTGATGGGAACAGCCGCCTTGGAAAGATTTCCAAATTAGGACTTGCTCCTGTATTATGGTGTATAATTTTTGTGC TCCTGGTCACCTACATTCATTCGGTCATCTTGGCAACAAATCTGCCGAAGCTGACAGCTGCAGCTGCCCTTCTTGCATGGTTTGGAGTTTTACTTGCAAC TGTGGGATTGGCTATGTTTTACAAGTGTAGCAGCAAGGATCCAGGTTACATCCAAATGAATATGCATGACACTGAGAATATGAAAGATGATGAGCCTCTC TTGAAGATTGAGATAAATAATCCTGCTTTGTTAGCTGGAAACTGGTCCCAGCTTTGTGCAACATGCAAGATTGTCAGGCCTCTTCGTGCGAAACATTGTT CTACATGTGATCGTTGTGTGGAACAATTTGATCATCACTGTCCTTGGGTTTCAAATTGCATTGGCAAGAAAAACAAATGGGATTTCTTTGTTTTTCTTGT TCTCGAAGTTTCAGCAATGTTGGTGACTGGTGGAGTTTCTCTTACAAGAGTATTGACTGATCCACTTGCTCCTTCTTCATTTGGAGCATGGATTCAGTAT GTTGGTAAGAATCACGTTGGTGCAGTATCATTTTTAATTGCTGATTTTTTCCTATTCTTCGGTGTGTTCGCTTTAACCATTGTTCAGGGTAGTCAGATAT CACGCAATATTACGACAAATGAAATGGCGAATGCAATGCGGTATAGCTACCTAAGAGGTCCAGGCGGTAGATTTAGAAACCCATATGATCATGGTATCAA GAAGAACTGCTCTGATTTCTTGATCAATGGATACAATGAAGATGTAGAGTGCATTGAAGTATGTAATTCAGAGGAGGGTATTGGAATGGTGCCGGTGTCA AAGGGCTCAAACTTAACAAATGAAGACTCACATTCTCATTTTGGTCATACAAAGGGTAATGAAAATGACCATGTTGTTATTGATGTGAATTCCAGCAATA CCACCAACTCAAAAACACATCATGGTCATATTAATGGCCATGTTCATTCTTCACATTGTAGCCATAATAATAATGGCAAAAGATGACAGCATTCCGAAGG GCTTAGGTCTTGGCCTCGGACGGAACACCAGATCTGTTGCATCCTCCTCATATTTACATGTCTGGTTGGTTGTACCTAACTGCAATGTATCATAGGCACA CATCTTGATTTGTTTGTGTTAAATCAATTTATTATGGCTCTTTTTTACCATACCCATTTGCAATTTTGTGGTATCACATTGTAGCCTTCTTTGTCCTTTC TCACTTTCCCCCTCCTTTTGTTGTAACTAATTTGAGGGATATTTTTAGAGCTGTTAATTTTTTAATTAATTTTATTTTGTTTCACTTTGGCATGTAGAGT GACAAAGTGTGGGACACCTAACCTATAACTCTATAACCCCTAATGGAGTATGATACTAGGCTACCACAATGCCAATATAATTCACATGTTTAGTAGCTCA ATATTATTTTCAATATTTCâBLAST |
Tissue | flowers |
Gene name | LI_gene_74069; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_136959
Blastp | Protein S-acyltransferase 24 from Arabidopsis with 66.55% of identity |
---|---|
Blastx | Protein S-acyltransferase 24 from Arabidopsis with 67.44% of identity |
Eggnog | Ankyrin Repeat(COG0666) |
Kegg | Link to kegg annotations (AT5G20350) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019440946.1) |
Pfam | DHHC palmitoyltransferase (PF01529.19) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |