Ll_transcript_80890

• Id Trinity: FTRINITY_DN58102_c1_g1_i1
• Name Transcript: Ll_transcript_80890
• Sequence: CCCAAATTGCAAATTCTTCAGATTGGAAGTAATGGAACAACTTTTAAATCTTCACATTTCATCATAAGAACATCCTCGATCTTTTGTATCATCATCTCCG AAAGACAAAATGGGTTTGAAGAAATTCCTAAAACCAATATCAAAACCACAACTTGACTACCACCCTTTACCACCACTCTCTCCAATCCCAAACCCACCGC TTCCATCTCCGCCACCACACACTTCACCTCCTCCTCCATCTCCTCCCACTCTCTCCCTCTCTCCCCTCCCTCACCACCACTTCCACCACCTCCAACTCTT CCTCAAAACCCATCTCTCCCCTCCCTTCACCCCTCTCTCCCTCCTCCACTTCCTCAAATCCAAGCTCCACCACCACCCTTCCTTTTCCCACTATGACTTT CATATCTTCAATTGGGCATCAAAAATTGATTCTTTCCGCCATACCCATCTCACTTTTCATTGGATGGCACAGACCTTATCCGTAACGCACCGTTTTGATC AACTTAGAACCCTTATTGAGTTCATTGCATCGAATCCTTGTCCGTGTTCTGATGGTACTATATTCTCTTGCCCTCAAATTGAACCTATTTTCAGGTTTGT AATTCATGGGTATTGTAAAGTTGGGAACTTTGATGATGCCCTTTACGCGTTTCGGACAATGGTTAGGTTGATTGATGGGAGGCCTAGTGTTGTGGTTTGT AATATTTTGCTTCATGGGTTTGTGAAATGTGGGAGGTTTGATAGGGCTTTGGGGTTTTATCATGATGAGATGGTTAGATATAGGGTTAAGCCTGATGTGG TTAGTTTTAATATTTTGATTAGTGGCTATTGTCGTGATTCGCGGTTTGAGTCTGCTTTGGAGATGTTTAAGGAGATGAGGGAAATGGGGTGTGATCCAAA TGTGGTTACTTTTAATACATTGGTTAAGGGGTTGTTTAGAGAGGGGAAGGTTGAGGAAGGGATTGGGATGGTAAATGAGATGATTGAGTTGGGGTACCGG ATTTCGGATGTGACTTGTGAGATTTTGGTGCATGGACTTTGTAAGGAAGGAAGGGTTTTGCAAGCGTGTGAGATGTTGGTGGAGTTGTCGAAAAGGGGAG TTTTGCCAAAAGGGTATGATTATTTTGGTTTGGTGGAAGTTCTGTGTGGGGAAGGACGTGTTGTTAGAGCGTTGGAGCTTATTTATGAGTTATGGGACCG AGGAAGTGTTCCGAGCTTGATTGCTTGTACTGTGATGGTTGATGGTTTAAGTAGATCGGGGAAGAGTGAAGAAGCTTTGAGTTTGGTGGAAAAGATGCTT AAAGAGGGTATGGTATTGGATATTGTGACTTTCAATTGTGTCCTTCAAGATATTTGCAATGTGGGAAGAACAAAAGAAGCGAATAAATTGAGATTACTTG CTTCAAGCAAGGGTTTGGAACTTGATGGCATGACATATAAAATTTTGGTGACTGGGTATACAGAAGAGGGCAATCGAAAGGAGGGAGAGTTAGTGGTAGA CGAAATGTTGGATAGAGGATTCATACCTAGTCTTGCTTCATATAATAAATTGATGAATGGATTATCTAATTGCCGACGCTCTACTCTTAAAGTGAACAAA TTTGGTTGCTGAAAATACAAGCATTATATTTTACATGGTCATAAATTGACAAGACATGGAGTTCTTGGGTTCAAATTATGGAAACAGCTCCTTAGCTTGC AAGGGTAAGACTGTTTATATCTACCATCCTCATGTCCCATTAGGTGGGAGCCTCGTATACCGGTCGACAACATTGGTTAACGGTTAACGTGATTATGGAA TGATTGGGACCAGAGTTATCATATTTCTGTGAAAAAATCAGCTGGAGTATGATTATTTGTTTTGCACAAAGATGAAGGTAATGTGAAGATCTCTTTGAAG TTGGGGCTTGAGTTCATTTATCGGCGTCATTGTATTACGGCCCGCAGCGTAGCCTCGACGCTGCATTAGATTCGAGGTGATGCAAAACTGAAAATGGAGT TAGGATTCTCTCTAATATAGCAAAGATGCTATATTGTGTCATCATCTGATCCTTGTTATCAAGACTACAATCAAGAATAACCCTATAACACAGCATAGAG AGAGCATGATCAGTTTCTTTAACACTCCCTGTTGTAACAAACTTCCCAGAAACCTTGTCTTCTATGACACAAATAACATGATCATCTCCAAGGGAACTTA GTTCTCAAAATCGAGATTCAAATTCCTCGTTGGAAACAGGGGTGAAGATCAACTTACTCCAAGAGTAAGTCTTTTTAGGAGTAAAGACTTACTCCTCATC CCAACCATCAATTCCTTGAAAATCCAATGGTTTGAATCTTCCACTAAGTCAAATCATTGGATTTTTCTAAAATTGATGGCTAAGATGAGAAGTAAGTCTT TTAAACTTACTCTTGGAGTAAGTTGATTCCTCCTCGAATCATAAACACTG
• Tissue: flowers
• Gene name: LI_gene_74201;
• Additional information: details;

Expression of Ll_transcript_80890

FPKM

• FPAB: 0.1
• FPNAB: 0.6
• LF1: 0.6
• LF2: 0.4
• LF3: 1
• LF4: 0.4
• UF1: 0.8
• UF2: 0.9
• UF3: 1.3
• UF4: 0.8

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_80890

• Blastp: Pentatricopeptide repeat-containing protein At2g36240 from Arabidopsis with 52.98% of identity
• Blastx: Pentatricopeptide repeat-containing protein At2g36240 from Arabidopsis with 55.16% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT2G36240)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019424640.1)
• Pfam: PPR repeat (PF01535.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;