Ll_transcript_78862

Id TrinityFTRINITY_DN58105_c4_g3_i10
Name TranscriptLl_transcript_78862
SequenceCTCGCACGGAGACAATCCTGTCCGATCCGGGAACATCCACATGTATGTGGGGCTAACTCTCCCAACGGACATTTTTTCCATCCACAAAGATCGAACTCAG GTCCTTGCTTAAGGGAAATCAAGCATGTACCACTTGAACCAACGCCCGTTGGTCAATTTTTTCCGTTTATATTATTCTGTTCTGATCTGAAATCACATGT GTCAAGTATGGTTGCTATCTGTGTTTCATTTCCTGTTTGCTAATGGGGTATTATCTATGAGACATGTGGGTGTTGAATAAGTATATTCAGCCCAAGGGAT CTAAAACCGGACTTGAAACTTTCTTTTTGTCCGAGTCATGTATTTACGAAATATGTGCTTTTGAAATAAAACCTGGCTGGTAGTTTTTTATGAATGCACA TTGCAATTTAAGGAATTAAGGGTTAATTGAGTTCAAAATCTGGGAGTGATTGCCTGATTGATCATTAAAGTAAATGAATTACCTTTTTTATTCCCTGCAC ATTGCACGTGCCAGGTTTTGCTCACCGTTTCTTTGAAATACCACATGTTTTTGTGCTGGTGTTTGTTGCAGAAGCTTTGTCTTTTGGATGCAATCATATG AAACAGTGCTAAGTTTTAGGTCCTGAACTTTGCTTGTAATATGTGGATTTTGGTGATTCCTTGTTTCAGCATTGAGAGTTCGGAAGATATGTAGGCCTGC CATGTATATTCGGTTGTTATTAGTAATTAGTATTATGAAGAAATGTTTCATTCCGACTTATTAAAAAAAATATGGGTTCTCTTTTTAGGAAAGTTCCCTT AAGAACTAGTTCTCTGGTGATTTGAAGTTGACTTCATTTCAATTAAAATCTAGCTTCTATTGAATTACTTGAAAATGGTCATATCGGATTGATTACGTGA ATGCTTTCCGGCTCAAAACTTTATGTCTGTTTGCTTTCTCTAAAAAAATGAAGCAAACTGTATAACAATTTTTGTTGTTGTTTTGGGTTATCTGTCACAC TTGGGGTAGGTGACTCTCTTGAAACTGATATCGTTGTTTATGTATAAATGTCCTTTACAGGCTGCACTTTTGGTACCCTTGATAATATAATTCTTTTTCG GATAATTTCCAGCACTTTGCTTAGATCTTGGATTACAAGTCATATTGGATTGAGGCCTAGCCACAAGCCCGTAAATGCTAAACGACTTCTCTTTTGCATT CTAAAACCACTGCTTCTCTTCAAGCATCCTTGGATACTGATATAAGTTTCATGTCTCGGAAAGCATTTTTGGACTTGTCCTTCCTGCTTCGAAGCTGCAC GCCTCATTCCGCTATCTTTCAAGCCAAGCAATGCCATGCCCAAACAATTCTCCAAGGTTTACTTCCCAATGTCACACTTGAAAATGATCTCTTGCTAGTA TACTCTAGATATTCCCTTTGCTGTTATGCTCGCAAAGTATTTGATAGAATGCTTAGAAGAAACATGCATTCATGGAACATAATGATTGCCTCATGTGTCA AGGATTCCATGTATAATGATGTTTTGACAATTTTTAGTGAGTTAAAGAGACATGGTCTTCAGCCGGATCATTATACATTACCATCACTGTTTAAGGCTGC TTTAGGAGTATGTGATGCTTGGCTAGGTAAAATATGTCATGGTTGGGTGATAAAGCTTGGGTACGAGGGATATGTTGTCGTAGGTAGTTCTGTGCTTGAG TTTTATATAAAATGTGGGGATATGCCTCAGGCGCGCTCGGTATTTTCAAATATGTTGTGCAGGGATCATGTGGTGTGGAATTTGATGATTTCAGGGTTTG GAAATGCGGAGTTGTATTCGGAGGCAATCAATTGTTTTAGGGAAATGCTGGTTCTAAATGGGGTGAAGGTGGATTACATGATTGTTCCGAGCATTTTGAA TGCTTGCGGAAGGGAAGGAGACTTGATGAAAGGGAAAGAAGTACATGGTTATGTGGTTAAAAACTTTGCCTTTGATGCAGATGCTCCCATTGGGAATGCA TTGATTGATATGTATGGGAAGTGTGGATGCTTGAATGATTCCGAAACGGTTTTCAGGACATTGCGCCACGTGAATCTGGTCACATGGACCACCATGATAT CTTGTTATGGGATACATGGAAAAGGGGAAGAATCACTTTCACTGTTTAAGAAGGCAATAAATGATGGGTTTGCACCGAACTCTGTCACGGTAACAGCAAT CTTAGCCAGTTGCAGCCACACAGGTCTGATAGATCAAGGCAAACACATTTTCAGTTCCATTTACTCTGATTACGGATTAGAGCCCACCATTGAGCACTAC GCATGTATGGTGTATCTTTTGAGCCGCAGCGGATATCTCGTCGAAGCACTCGATTTCTTGAAAAACATGAAATCACCCGTGACAGGAAGCATTTGGGGTG CCCTTCTTGCTGGTTGTGTAATGCATAAGAATGTTGAAATTGGAGAAATTGCTGCTCATCATCTTTTCCAATTGGAACCAAATAATGCTAGCAACTATAT AGCACTTTGTGGTATCTATCAATCTCATGGTATGCTTGATGGCATTTCAAATATTAGAGCCAAAATGAGGAACTTAGGTTTGGTTAAAACTCCTGGTTAT AGTTGGATCAATATTGATGGAAGGGCTCATAAATTCTACCAAGGGGACATTTCTCATCCACTTGCTCAGATGATTTACAAAATAATCTATCAAATTAGCA ATGTTCAGTTATTGAATAACTATTATCTGGGAGTAGAGAATTCTCTGCATGATGATGCTTTGATCATGGGTTTGTAGATCATTACAGGCCATGTCATAAG TGGACCAATCCGTAAGTTCGCAATCAAATACCCGGCAAATAAGATCTATTTCATGTGGTCATCGATCATGCCTAGATAGCTAACTTAATCAGGTAAAGGA CGACAATGACAAAATATGACGTAGTTAATAGTTACGGGACCACAAACCTCTTCTATAGCATTGTCACATCGTCTGAACAACACAAGCCTCTGCTATAGAA TTGCCACGTCGTGTGAACAACGCAGACTTCTGCTACAAAGTTGGACACATTATCTAAAATTGGGTTACCCTATACCATGCGACAAAGACAAAC BLAST
Tissueflowers
Gene nameLI_gene_74235; 
Additional informationdetails; 

Expression of Ll_transcript_78862

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_78862
BlastpPentatricopeptide repeat-containing protein At5g04780, mitochondrial from Arabidopsis with 34.49% of identity
BlastxPentatricopeptide repeat-containing protein At5g04780, mitochondrial from Arabidopsis with 34.49% of identity
EggnogPentatricopeptide repeat-containing protein(ENOG410Z7Z7)
KeggLink to kegg annotations (AT5G04780)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019418560.1)
PfamPPR repeat family (PF13041.5)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;