| Id Trinity | FTRINITY_DN58105_c4_g3_i7 |
|---|---|
| Name Transcript | Ll_transcript_78848 |
| Sequence | CTCAAAACCCGACGAGATCATTCTGGATGATATCTCTATTTTTAAAACCGTTGAGTTCGAGTTCTCCTCACATTTTACTTCAAAATGTAATACTTGCTTC TACGAACAAAAAAAATAATGGGGTCCAAAAGAAGAATACTAGATGATGAGTAACAAAGGCCACATTAACTAAACGCGAAATAAGGGTATCCTCGCACTGG AGGCAATCCTGTCCGAGCCGGGAACATCCACAGGCTGCACTTTTGGTACCCTTGATAATATAATTCTTTTTCGGATAATTTCCAGCACTTTGCTTAGATC TTGGATTACAAGTCATATTGGATTGAGGCCTAGCCACAAGCCCGTAAATGCTAAACGACTTCTCTTTTGCATTCTAAAACCACTGCTTCTCTTCAAGCAT CCTTGGATACTGATATAAGTTTCATGTCTCGGAAAGCATTTTTGGACTTGTCCTTCCTGCTTCGAAGCTGCACGCCTCATTCCGCTATCTTTCAAGCCAA GCAATGCCATGCCCAAACAATTCTCCAAGGTTTACTTCCCAATGTCACACTTGAAAATGATCTCTTGCTAGTATACTCTAGATATTCCCTTTGCTGTTAT GCTCGCAAAGTATTTGATAGAATGCTTAGAAGAAACATGCATTCATGGAACATAATGATTGCCTCATGTGTCAAGGATTCCATGTATAATGATGTTTTGA CAATTTTTAGTGAGTTAAAGAGACATGGTCTTCAGCCGGATCATTATACATTACCATCACTGTTTAAGGCTGCTTTAGGAGTATGTGATGCTTGGCTAGG TAAAATATGTCATGGTTGGGTGATAAAGCTTGGGTACGAGGGATATGTTGTCGTAGGTAGTTCTGTGCTTGAGTTTTATATAAAATGTGGGGATATGCCT CAGGCGCGCTCGGTATTTTCAAATATGTTGTGCAGGGATCATGTGGTGTGGAATTTGATGATTTCAGGGTTTGGAAATGCGGAGTTGTATTCGGAGGCAA TCAATTGTTTTAGGGAAATGCTGGTTCTAAATGGGGTGAAGGTGGATTACATGATTGTTCCGAGCATTTTGAATGCTTGCGGAAGGGAAGGAGACTTGAT GAAAGGGAAAGAAGTACATGGTTATGTGGTTAAAAACTTTGCCTTTGATGCAGATGCTCCCATTGGGAATGCATTGATTGATATGTATGGGAAGTGTGGA TGCTTGAATGATTCCGAAACGGTTTTCAGGACATTGCGCCACGTGAATCTGGTCACATGGACCACCATGATATCTTGTTATGGGATACATGGAAAAGGGG AAGAATCACTTTCACTGTTTAAGAAGGCAATAAATGATGGGTTTGCACCGAACTCTGTCACGGTAACAGCAATCTTAGCCAGTTGCAGCCACACAGGTCT GATAGATCAAGGCAAACACATTTTCAGTTCCATTTACTCTGATTACGGATTAGAGCCCACCATTGAGCACTACGCATGTATGGTGTATCTTTTGAGCCGC AGCGGATATCTCGTCGAAGCACTCGATTTCTTGAAAAACATGAAATCACCCGTGACAGGAAGCATTTGGGGTGCCCTTCTTGCTGGTTGTGTAATGCATA AGAATGTTGAAATTGGAGAAATTGCTGCTCATCATCTTTTCCAATTGGAACCAAATAATGCTAGCAACTATATAGCACTTTGTGGTATCTATCAATCTCA TGGTATGCTTGATGGCATTTCAAATATTAGAGCCAAAATGAGGAACTTAGGTTTGGTTAAAACTCCTGGTTATAGTTGGATCAATATTGATGGAAGGGCT CATAAATTCTACCAAGGGGACATTTCTCATCCACTTGCTCAGATGATTTACAAAATAATCTATCAAATTAGCAATGTTCAGTTATTGAATAACTATTATC TGGGAGTAGAGAATTCTCTGCATGATGATGCTTTGATCATGGGTTTGTAGATCATTACAGGTAATTCATCTGATTTTGTTCTCACTCAAATTGGTGAGAA ATTAAACATCTTTCTTTATACGGGACCTGAATTGAAATCCGAAAATGTGTATCACTCTATGTATTCTTTGATTCTCATTGGTCAGAAAATATAAAGTTTT CTATTGATT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_74235; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_78848
| Blastp | Pentatricopeptide repeat-containing protein At5g04780, mitochondrial from Arabidopsis with 34.49% of identity |
|---|---|
| Blastx | Pentatricopeptide repeat-containing protein At5g04780, mitochondrial from Arabidopsis with 34.49% of identity |
| Eggnog | Pentatricopeptide repeat-containing protein(ENOG410Z7Z7) |
| Kegg | Link to kegg annotations (AT5G04780) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019418560.1) |
| Pfam | PPR repeat family (PF13041.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |