Ll_transcript_80674

• Id Trinity: FTRINITY_DN58115_c1_g1_i11
• Name Transcript: Ll_transcript_80674
• Sequence: CTAATCCCAAAAAAAATACTTTTTTATCTTAGATTTATTTAGAAGGAGAAAGTTGTGAGTGAAGCAAAAGCATATACAATAACTTGTAGTTTGCACTTTG TACCTTGTTGAGCATCTTAGCAACTGAGTTGACTTGGGTGGTGTAGTTGCATACTTCCCAAAAACCCAACAAAAGGACAAAACCTCCTCATTATAGAGTA ATGAGTGGAGCGCGTACACTCACACCAACAACAACTTCAGCCATCTTATACACACAATTAAACCAGGGTTCTTCTCACTTCACAAATATCTCTAACCCTT CAACCCCTTTTCCTTTAATCCAATTCCAACCTCTTACTTTCCATAAAGAATCTCAATAGGTGCATGAAATCTGGTGATCTCCCATCCTATTGAGAATGAG AATATCACCGGAAATTTTGATTAAATAACAGAAACGTACTGCTGGAAAATGGGAGGTTGCTGTTGTTCTGCAAGAAAACCTCACCTGCCGGGAACACCAG TGTATTACTATTACCCACCATCTTTGGCAGAGCGCGAGTCGTTGAACACTACCGATGGTTCGTCTGCTTCACTCACTGCTGGATTGCTCGTAGGTTTGGA CATAGAATCCTCCACACCAGATACATATCAGTCCCCTCCTGTACCTCTGCCTTATGATACAGTCCTTGGAGTTCCAGCATCAACGTACTCTGAAGCAGGC AGAGAAACACCTAGCGGTACTAGTTTTGAAACTTCGGTGAGATGTGAAGATCTTGTAGAATCAGAATGCAAAGCTCAAGCTGATTCCGAACCCATGTCTC CAAAGAAACCAGAACTGTCAAAATCAAATGAATCTCATGCATTAGCGACAGAAGAAGAGGATGTCTGTCCAATCTGCCTTGAAGAATATGATGTTGAGAA TCCTAAAAATCTGACAAACTGTGATCATCAGTTTCATCTCTCTTGCATTCTTGAGTGGATGGAAAGAAGTGATTCCTGTCCTATATGTGATCAGGATATG ATATTTGACGAAATGACACTGAACTAGATTGATTCTCTTGAAATGAAGCTTGCTAAATATCTGTGTGGAAGATAGATGAAACCGGTTGGATGATGGTACA GATTTCATTTTCGAATCGCCGTGCTTTTAAAAAGTCGTTGTTCTAGTAGGTACATTCATTAGGGGAATAGAATTGTTAGAAGAAGAATGAGGAGGTTTTA ACTGAATGCTACAACCACATTGCTGAAGAAAGATGATGGAATTCATGTTCAAAAATAGCTTTTTACTTGTGTTGATTTCTTGTTCTCATTTCTTGTACAA ATTTATCAATGTTTATTTTATTTCAATGCTATTTTGTTTGTTTGAAAGAAAAAGAAAGAAAAATTATATTGGTG
• Tissue: flowers
• Gene name: LI_gene_74332;
• Additional information: details;

Expression of Ll_transcript_80674

FPKM

• FPAB: 16.2
• FPNAB: 11.6
• LF1: 5.7
• LF2: 6
• LF3: 7.8
• LF4: 7
• UF1: 6.3
• UF2: 6.1
• UF3: 9.2
• UF4: 10.3

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_80674

• Blastp: Probable E3 ubiquitin-protein ligase RHB1A from Arabidopsis with 54.79% of identity
• Blastx: Probable E3 ubiquitin-protein ligase RHB1A from Arabidopsis with 54.79% of identity
• Eggnog: zinc ion binding(ENOG41121N2)
• Kegg: Link to kegg annotations (AT4G00335)
• CantataDB: Link to cantataDB annotations (CNT0000117)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019462195.1)
• Pfam: RING-H2 zinc finger domain (PF12678.6)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;