| Id Trinity | FTRINITY_DN58115_c1_g1_i18 |
|---|---|
| Name Transcript | Ll_transcript_80682 |
| Sequence | CTAATCCCAAAAAAAATACTTTTTTATCTTAGATTTATTTAGAAGGAGAAAGTTGTGAGTGAAGCAAAAGCATATACAATAACTTGTAGTTTGCACTTTG TACCTTGTTGAGCATCTTAGCAACTGAGTTGACTTGGGTGGTGTAGTTGCATACTTCCCAAAAACCCAACAAAAGGACAAAACCTCCTCATTATAGAGTA ATGAGTGGAGCGCGTACACTCACACCAACAACAACTTCAGCCATCTTATACACACAATTAAACCAGGGTTCTTCTCACTTCACAAATATCTCTAACCCTT CAACCCCTTTTCCTTTAATCCAATTCCAACCTCTTACTTTCCATAAAGAATCTCAATAGGTGCATGAAATCTGGTGATCTCCCATCCTATTGAGAATGAG AATATCACCGGAAATTTTGATTAAATAACAGAAACGTACTGCTGGAAAATGGGAGGTTGCTGTTGTTCTGCAAGAAAACCTCACCTGCCGGGAACACCAG TGTATTACTATGTTAGTAATTTTCTATCTCTAAAACTTGATTTGTAGCTTTCGTTACAATATGGTTGCTTATAAGCTTACGTCTAGTAATGTCACTATTT GTTTATGTCATTTTCAATTAGAATAACTTTATGATGGATGATAGTGCATCTTTGATATCATCTCATGACTCATCCATATGGTATTCTCCTTTACTTATCC TACATCTGTTAACTCATGAGCCCTTATAGCCCCTGGAAAAAAAGTTGAAAAGAAAAATGCTCGGTTTTTAAGAAACCAAAAAGAAATAATGAGATGATCT CCAAACTTAGCTATAATTCTGTTATCCCTCATTCCCTCCTTTAGTTGATAACATTCATCAGTGGAAACTCTTGGAATTATATTCAATGAAGAATTCATTA CAATGTGATATTTACAAGACTAAATAAATAGAAGAAAGGAAGTTCCTAGAATATTAAGGTCCCAATACTTCTTTGAACTAGAAACTAATTTGTTGCTATG TAAATTCCAACTCATTAGCAACCTGCTAACACCTCCTCAAATTAATGCGCTTGGTCAAGAATCAATTAGACTATGAGAAATTTATGATGATGCCGAGATA TGGCCTTGGTAAACACATCAACCAGTTGTAGATCCGTGGTGACACTGGAAGCAAGATAGCATGATTATCAAATGCTTCACAAATGGAATGATAGTCCACC TCAATATGCTTGGCGCACTCATGAAAGACCAGATTAGCAGTAATCTAGATAACACTTGTTTTATTTGCAAAGAGGGGAGCGGGATGAAGAAGTCCAAGCT TAGCTAACAAACCGTGCAGCCAAGTGATCTAATATCAAGATAGATACATACACGATATTCAGACTCAGTTGAAGACTTGGATACTGGAGCTTGCTTCTCA CTCTTCCAAGAAATGAGGACGTTATCATGAAACATACGGCAACCTGTAACAAATTGCCAAGTGCCCATGCAGCCAGCCTAACCTCACTATAAGTAATCAA CCGAAGGGAAGACTCAATAGAAAAAACATAAACCATGGCTGGCAAAACCTTTCAAGTAGCAAATGATATGCAAACAACATCCAGATGAAGATGTCAAAGG AGTGTGCATAAACTGAATCATGTGTTGAATGGCAATAAAATGTTAGGTAGTGTGATGGTCACATAATTAAGGCTCCTGGCCAATGGATGACACAGCAATG GATTGAGAAGGGGCTCACCTTCCTCACGACGGTATTCGTGTTTACCTCGAGGAGTGTGTAAACAGAAGAAGCAGATTGAAAGCCAACCAAAGAGACCAAG TCCCGGCATATTTTTTTTTATGTTAAAAAAGTACAGTGGATCGTATCATACTCCAAGGTGCAAAAATAGTGGAGGGAACTAAGATCCGTCATGTGAAACA TGGCTTGAAGCAGTTGGCTTACTTTTAGAAGTTTACATGCAGAACAGCCAAAAGATAAGGGATAGGAAGAAGAATGTTTTTTACTACCAAAAAATCCATG TTTAATAGCTAGATTAAACAAGGGAGTTCCGTAACCCAAACATTCATGCCATATTGCACTTCGATTTTCTAGAGGTAGAAGCGAAATAGAAAAACTCTAG GAGTAGTCAAGTGTAGAGGAAACAATCTGTTTACTTCAGCTCCATTTGTGTTCCCTTCCCCAACTCATAATCCTGCACAAGACAACCACCACGAGAAAAA TGAATGTCACAATTGTTATCTACCACTCGACCAACTGAAATTAAACTAGAAGAAAGTCCCCGGGGCACTAGCACATAATGAAAAGGGGAATCAATATCCC GAACTGCAGCATTAGGGAGAGTTCTAGCATTCAATTTGATTATGTTCTGTACCAGAATAGGGTAAAACATTATTAAGAAATCGGATGTACCGGTCATACG ATTCGAAGCCCCAGAATTAACAAAACTAAGGCTTGAGAGAATTTTTAGTCTTACCTTGAATGGCCAAGACTATCCTTGGACTTGGCTTTTATTGAGAACA TGCTGACAAGAAAAATGAGCACAAGGAAGCAATTTCATTGTCATCTTTCAATTTGCAAAGATTCTTAGGCTGAAACAAAAAATTTAGGCAATTTCCATCT TTTCCATAATGCCCATGCTATCTTTTTTCTCTTACTAATATAAACCGCTGCACTTTCATACGCATGATCCCCTTGGTGATGTCATACCATATAGAAATGG TGGCTGGGTTCTAGTTGAACATGGACTGTTTTTATTGTTCTCTTCAAAATAAGTGTTTCTAGAAAAATAATCTTAGTTTATTGCTTTGGACAAAGCTTTA TTTTGTCATGAAGCCGCCAACTTTGACCTGAAATCTGAAAAAAAAACTCCTGTTTACAGTACCCACCATCTTTGGCAGAGCGCGAGTCGTTGAACACTAC CGATGGTTCGTCTGCTTCACTCACTGCTGGATTGCTCGTAGGTTTGGACATAGAATCCTCCACACCAGATACATATCAGTCCCCTCCTGTACCTCTGCCT TATGATACAGTCCTTGGAGTTCCAGCATCAACGTACTCTGAAGCAGGCAGAGAAACACCTAGCGGTACTAGTTTTGAAACTTCGGTGAGATGTGAAGATC TTGTAGAATCAGAATGCAAAGCTCAAGCTGATTCCGAACCCATGTCTCCAAAGAAACCAGAACTGTCAAAATCAAATGAATCTCATGCATTAGCGACAGA AGAAGAGGATGTCTGTCCAATCTGCCTTGAAGAATATGATGTTGAGAATCCTAAAAATCTGACAAACTGTGATCATCAGTTTCATCTCTCTTGCATTCTT GAGTGGATGGAAAGAAGTGATTCCTGTCCTATATGTGATCAGGATATGATATTTGACGAAATGACACTGAACTAGATTGATTCTCTTGAAATGAAGCTTG CTAAATATCTGTGTGGAAGATAGATGAAACCGGTTGGATGATGGTACAGATTTCATTTTCGAATCGCCGTGCTTTTAAAAAGTCGTTGTTCTAGTAGGTA CATTCATTAGGGGAATAGAATTGTTAGAAGAAGAATGAGGAGGTTTTAACTGAATGCTACAACCACATTGCTGAAGAAAGATGATGGAATTCATGTTCAA AAATAGCTTTTTACTTGTGTTGATTTCTTGTTCTCATTTCTTGTACAAATTTATCAATGTTTATTTTATTTCAATGCTATTTTGTTTGTTTGAAAGAAAA AGAAAGAAAAATTATATTGGTG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_74332; |
| Additional information | - |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_80682
| Blastp | - |
|---|---|
| Blastx | Probable E3 ubiquitin-protein ligase RHB1A from Arabidopsis with 51.81% of identity |
| Eggnog | zinc ion binding(ENOG41121N2) |
| Kegg | Link to kegg annotations (AT4G00335) |
| CantataDB | Link to cantataDB annotations (CNT0000117) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019462195.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |