| Id Trinity | FTRINITY_DN58116_c0_g3_i12 |
|---|---|
| Name Transcript | Ll_transcript_80234 |
| Sequence | CATCTCCCTCTACTATCTCTCCCCTTAACAGAATCCAAGAAGAAAAAAGCGAATTTTTTCCTCTAAAAAATTTGCTTTTTTCTGTTGGGGGTTGTTACTG TTCCATGATTCCATCTCTTCATACAATGCAATGTTACCAACTCCCTCCTTAAACCCTTTTGAGAGATTCTCTTTTTTCTTCTTCATCACCCTCTTGTTTT GATTTCCTTGTGATGCAAGGTAAAGAAAATGGAGAAACCTCAAATGGGTTTTGGAGTTTCTTCATCATATTGTTTTGTTTTGGTTCTCTCTGTGATTGTT ATCACTGTCAGGGGCCAGGATTATGAGGTGATGGTAACGTTGAAGAGAATGATCATCAATGCCCCCAACACTTTACAATGGACAGATCCTGATGTATGCA AATGGAATCACATTCAATGTGACAAAGGAAACCGTGTCACTGCTATTCAAATTGGTAACCAAACTCTTCAAGGTTCTCTTCCTAAGGAACTTCAGAATCT TTCACATTTAAAACGTTTTGAATGTCAAGGAAACAATTTAACTGGTGCATTCCCTTACCTTTCAAAATCCTTACAAAAGTTGTTGATTCATGGCAACATG TTCACCTCATTCCCCAATGATTTCTTCATGGGTATGAGCAATTTGGAAGAAGTGAGATTAGATGAAAACCCTTTCCCTCAATGGCAGGTTCCTAATAGTC TTAATGAATGTATTGCTCTTCAGTCTTTCAGTGCTCAAAGTGTTGGTTTTGTTGGGACAATCCCAGATTTTTTCGGCAATGGTGGTCCTTTCCCTGGCTT GGTTTACTTGGCCTTATCTCGCAATTATTTTGAAGGTGTTTTGCCTGCAAGCCTTTCAGGTAGTTCAATAGAGACCCTATTGGTGAATGGACAGAATAGC AAGGCTAAACTCAATGGTACACTTGCGGTGTTGAAGAATATGACATCCTTGAAGCAAATTTGGGTTCACGGCAATTCGTTCACCGGTCCTATACCTGACT TGTCAGATCATGATCAACTTTATGACCTGAGTTTGAGGGATAACCAGTTAACTGGTGTTATTCCACCCTCTCTCGTGACTCTACCGAGTCTTAAGGTTGT GAATTTGACCAATAATAATTTACAAGGGTCCCCTCCAGTGTTCCAAAATGGGGCAAGAGTTGATAATAACATGAACACGGGGAGAAATCAGTTTTGCACA AAGATTCCAGGGCAGCCATGTAGTCCCTTAGTGAATACTTTACTATCTGCTGTTGAACCTTTGGGCTATCCTCTCAGGTTTGCCGAAAGTTGGGAGGGTA ATGATCCATGTGCTAATAAATGGACTGGGATAGTTTGTTCAGGTGGAAACATTTCTGTTATAAATTTTCAGAACATGGGCTTGTCTGGCACCATTTCTCC TAGGTTTGCTAGACTTACATCTGTCACAAAGTTGCTTATTGCTAACAATCATTTCACTGGTACCATACCAGCTGCACTTACTAGTATGCCTCTTTTGCAA GAGTTGGATGTTTCGAATAATAACTTATATGGTCGCGTACCATCATTCCGTGAAGGCGTGGTTCTTAAATTAGTTGGGAATCCTGATATTGGAAAAGATA AACCTACTTATGGAGCTGACTCAGGTTCTTCTAGAGGTGATGATATAAAAAATCATGTTCGGATCGTTATTGGAATTGTGGTAGGGGCTGTAATATTACT TGGTATAGGGATACTATTATTTATTAAGTACAAAAGAAAAATGAATCCTAAAGGTAAAGTTCAAAATCCAACTGCAATAGTACATCCTCGCCATTCTGGG GATGACAATGCTATGAGGATAAGTATTGCTGGTGTTGTTGGTGGAGGAGCTCCATTAAGTCCAAGGAGCAATGTTTATCCGGTGGAAGCTGGTAGCATGG TGATTTCAATTCAAGTTTTGAGAGACGTTACCAACAATTTTAGTGAAGAAAACATATTAGGGAAGGGTGGTTTTGGCACTGTGTACAAGGGAGAGTTGGA AGATGGGACAAAGATTGCAGTGAAAAGGATGCAATCAGGAAATATGGCAGAGAAGGGACTGAGTGAGTTTATGGTTGAAATTGCAGTACTCACTAAGGTG AGACACAAACATTTGGTTTCACTCTTAGGGTATTGCTTGGATGGAGATGAGAGACTTCTTGTTTATGAATACATGCCTCAAGGTGCTCTTAGTAGATTAT TGTTCCATTGGAAAGAGGAAGGGCTAAAACCACTTGAATGGAAGACAAGGCTTACTATTGCATTGGATGTTGCTAGAGGTGTTGAATATCTTCATGATTT GACCCAACAAACTTTTATTCATAGGGATCTCAAACCATCCAACATTTTGCTTGGTGATGATTTGAGGGCTAAAGTGTCAGACTTTGGTTTGGTTAGGCTA GCTCCAGAAGGAAAAGCTTCATTTCAAACAAGGCTTGCAGGGACTTTCGGATATCTAGCACCAGAGTATGCAGCCACTGGACGACTTACAACAAAGGTTG ATGTATATAGTTTTGGTGTGATCCTTATGGAGATGATAACCGGGAGAAGAGCACTCGATGAAAGCCGATCGGAAGAGAACTTCCACCTTGTTACATGGTT CTGCAGGATGCTATTGAACAAAGATTCGTTCCAAACAATCATTGATCCGACAATCAATATTGACGACGAGGAAACCTTAGCCAGCATTAGCACTGTTGCA GACTTGGCAGGTCACTGCTGTTCAAGAGAGCCTTACCAGCGTCCGGATATGAGTCATGCAGTGAGTGTTCTATCACCTCTTGTTGAAGTTTGGAAGCCTA CAGAAGCAGATGTTGATGACATATTTGGTGTCAACTTTGATATGACACTACCACAAGCACTCAAAAGGTGGCAAGATTTTGAAGGAAGCAGTACTTTGGA TACTACTTATACTTTTTCATCAGTGAATACTAATACTAATGGAAACAACACAAACTCAAGCATTCCCCTATAGGCCATCTTTAATTGAAGACTCTGTAAC ATCATCAACTCTGGCTTCAATATATTTATTAATTCTTACCCTTTTGTGCAAAGAGTTATTGCATCGTCTGAGATCGTATGATCCTGATCAATAGAAACAT GACACATGTCCATAATTGTTGGACATTATATTGCCATTACTCGGGACCATGTCATCTCAAACCATGCAATAATTTATGGGTTGGAGCTCTTATATTTTTT GATTTTTTAAGGTTTGATAACAGTTACTAGGGTATTTACTACACCCTAATGTCCTACATTCCACAGACATCCTTGAGCCTAATGGTTTTGCTTAAAAAGA TGTTTTCCAGTATTTTAGAAGTTTTGGGATGAAAGTATAGATGTTGATGAAATTTTATTTTATGTTTTTTATATACTTTTCAAGGATTTAGATATGATCA ATCTTATTCTAGCCCTCTCCAGTTGTGGTATATTGCCGTTGTAGAATTACAATTGACATTGTGGACCATAATTTGAATCACTATTATCCATTAAGGAAAC ATATATAATAGTTTTTATTTAAATATTAAATâBLAST |
| Tissue | flowers |
| Gene name | LI_gene_74338; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_80234
| Blastp | Receptor protein kinase TMK1 from Arabidopsis with 56.6% of identity |
|---|---|
| Blastx | Receptor protein kinase TMK1 from Arabidopsis with 55.58% of identity |
| Eggnog | receptor protein kinase(ENOG41102Z7) |
| Kegg | Link to kegg annotations (AT1G66150) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019437448.1) |
| Pfam | Leucine rich repeat N-terminal domain (PF08263.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |