| Id Trinity | FTRINITY_DN58117_c0_g1_i24 |
|---|---|
| Name Transcript | Ll_transcript_78982 |
| Sequence | CACAGGAAACAGCACACAATAAACCAGGAATAGGACAATGTTTGAGTTGTAAAGAAACGAAAGCACTCAAAACAGAAGAACCAATTTCAAAATGACCGAG CCAATGTTTCTGTTTCAGTTTCTCTGTTTTGCAACTTTTGTTTCTTCTACTCTATAGTTACAACTATATAGATTTTCTCACCGGCTTCTCTCACTTTCCT GCAAAACTGTTCAACAGAACCATTTTTCTTTATTCACTTCATTGGCCCTTTCATATCATTTTTCTCACTAATTTGTGTTAAGCGTGATGGGGTTGCTCAG CAGTTTATTGGGGATTATTGGTTTTGTTATTGGAATCCCTCTTGGCCTATTGGTTGGCTTCTTTATATTTGTTTATGAAGATACCAAACAAGTCAAGGAC CCTGTTGTTAGGCCAATTAGTGAATTAGGCCCAAAAGCTTTGGAAGAACTTCTACCTGAGATTCCTCTGTGGGTGAAGACACCTGATTATGAACGAGTTG ATTGGTTAAACAAGTTTTTGCTGGATATGTGGCCTTTCTTAGACAAGGCAATTTGTGGAATGATTAGACTCACTGCAAAACCAATATTTGCTGAATACAT TGGCAAGTATCATATTAAAGGAATTGAGTTCGATAAGTTAAGCCTCGGAACTCTTCCTCCTACTCTCTGTGGTATTAAAGTCTTAGAAACAAATGAAAAG GAATTGGTCATGGAACAGGTGATCAAATGGGCTGGCAATCCAAACATAGTGTTGAATTTGCATGTTTCTTCTTTGAAGATCTCAGTTCAGTTGGTAGACT TACAAGTATTTGTGACATTGCGGACAATTTTAAGACCTTTAGTGCCTACAATACCCTGTTTTGCAAAGATTGTGGTATCTTTGATGGAGAAGCCTCACGT GGATTTCGGGATGAAGATATCCGGAGGAGACATCATGGCTATACCTGGTCTTTATGGATTTGTTCAGGAAGCAATAAAAAAACAAGTTGCAAGTCTCTAT CTCTGGCCTCAAACCTTGGAAATCCCTATCCTTGATGAATCAACGGTGGCCATAAAGAAGCCCGTGGGAATATTACATGTGAATGTAGTTCGGGCACATA AGCTTTTGAAGAAGGACTTGTTGGGAACTTCTGATCCTTACGTCAAACTAACTCTAACCGGAGACAAACTTGCAGCAAAGAAAACCACTATCAAGATGAG GAACTTGAACCCGGAGTGGAACGAGAAGTTCAAGCTTGTTGTGAAGGACCCTAATTCTCAAGTTCTCCAATTACAAGTCTATGACTGGGACAAGGTTGGT GCGCATGACAGGCTGGGGATGCAATTAGTCCCTCTTAAGCTTCTTAAACCCTACGAGAATAAAGAATTTACGCTCGATTTACTTAAGGACACTAATATCA ATGAAGTTCCGATAAAGAAGAATAGAGGGCAGATCGTGGTGGACTTGACTTTTGTTCCTTTCAAAGAAGATAGCATGAAGTTTGGTGGACATTCGAGAAC ATATAGCAGAAAGGAAAGTGGAAAGGATGTGGTATCCGATGATGAGGTCCAAGACGGAGCAGGTTTACTTTCACTTGTGATACAAGAAGCTGAGGAGGTT GAGGGGGAACATCACAACAACCCATATGCAGTGCTTACCTTTAGAGGTGAAAAGAAAAAGACTAAGATGATGTGGAAAACTCGTCACCCACGTTGGAATG AAGAATTCCAATTCATGCTTGAGGAGCCTCCTCTACATGAAAAAATACACATTCAGGTTTTGAGCAAGAGGAAAAGGTTTAGTTTTCTCTCAAAGGAATC ATTGGGGTATGTGGAGATTAATCTGAATGATGTGGTGCACAATGGTCGCATAAATGATAAATATCATCTTATAGATTCAAAGAATGGAGTGATACAAGTT GAGATAAGATGGACAACAGCTTGAGAAATCAAACCAATGTCTCAACTCTAATCATACATTTTTTGGATTCCTATCAGAGTATAAAAATTACAATATGTTG TTACCTTTTGCCATACCTCGGTAACAATAGAACTCCCCGGTAGTTGGAGGCTCCCCGATCGTGAGTCTGGTCCAACATCCTGTACATAGTACATCGTTTT ATTTTTTGTAGACAATCATATTAGAGATATAAAACATACTATATAATGTAACTTGATCTCTTAGCACACAACACTCAAACCAATCACCTTTTAGTTACAA ATTAATGTTTGAAGAATCTTATATGCAAACTTTTATGGAAAGAAAATATGTGTATTATCATTGTTGTATTATTATTTTTTTGAAAAGAAATCTTAACAAT AATTAAATATGAATCATGTAGTAGTAGTGTATCAAATTCATACACTGAGGTTATAACTTAACTCAAAATCATTGTTTGAGACAAATCCACAATACTAAAT GAAAATTTTATCTTTAAATGAACCTAATATCTTATTATAAAAGTTGTTTATACTTTTAATAACTTTAGGTAACTCAATTAAAATTCACAACTCTATTTAT ATTTTACATTAAAATATATAAAATTATAATTAAAAATGGCTAAACAATACCATGTTGTGAAGTCAATTGACTTCCAAGTGTTATGAAAAAATACTATACC AAAAGTCCAAAAAGTTGATTTATCTTAAACCAAAAATTATTTTATTTTAAACAACTTTATCATAATATTTTAATATCTTCAACTTTGACCAACAATTCTA ATTTGTAAAGAAATTATAGTGAAACACTCAATCCCTCTATACCTAAAAAAAATGTAAGAACCATTCTCAATGATTTAGAAACCATAAAAGGTAGTTGTTG TGGATTAAAAAAAGACCCCAATTTATCTTGTTATTTATTTAACCAAAACAAAATATAAATGAAAATATTTTATTTTTGTAAAAAAAACATGAAATTGGAC CCATTTCCAATATTAAAAATTGATGGGTCAAAATTAAAACCCAAAATAAAAAAAGTGTAGTATTTATTTGTGTGTAGTGTAGTGTAGTGTATTGTAGTTT AGTCATTCCCTCTTTCATTTTCTTCGTCAACTGCAATGGAAGCAACTCAACGAAAACCCTTTTTCTTCTTCATTTCCCTCTTTCATCTCTTCCTTTTCGC CAATTCCTTATCTTCTTTCCAAGACCTTCATATCATCAATGCCGAACGCAGGATTGATTTATCCTCTCACATTATTAAGGTGTACTTGACATTGAAGGTT GAAAACTTGGGGACATCTCCTGCTTCAGAAGTACATCTTGCCTTTTCACCTACTGAGGTTGAACATCTAGCAATAGTAAAAGCTGCTGCAACTTCTGGGA AGCGGAAGAAGAAAACTTACACTCCTCTTGGTGTTAAATCTGCTGATATACCTGATGGACCAAATGAAACTAAATTTTTCTCGATAGCTTTGCTAACTCC ACTAAGTAAAGGTGAAACCATAACACTAGAGGTGCTTTACCAATTGACACATTCTCTGGAACCTTTCCCAGTAGAAATAAGTCAATCAGAATCGCAGTTG GTCTATTTCCGCGACAGTGCAATATTATTGTCTCCCTATCATGTCAAGCAACAGACAACTTTCATTAAGACACCAACTACACGGGTAGAATCATTCACAG TGGTAGATCCCGTTAAACGTTCTGGTACAGAGCTGAAATATGGGCCATATGACAATCACACCCCATATTCATATTCTCCTGTCCTTGTTCATTTTGAAAA TAACAATCCATTCTCTGTTGTTGAGGAGCTAGAGCGTGAAATTGAAATATCTCACTGGGGAAGTGTACAGGTCACAGAGCGATATAGTCTTGTTCATGGA GGTGCTCGACACAAAGGTGTTTTTTCAAGGGTTGAATATCAAACTAGACAAGGTCATGGTGCTGGTGCTTCTTCATTTAAACATCTTCTTGCAAGACTAC CCGCTAGGGTTCACTCCGTATACTACCGGGATCAAATAGGGAATATTTCCTCTTCACATTTACGCACAGGTTTTGTGAAGGTAACATATATTGTTTGATC TTAAAATAACATGCCTTTTCGCATACCTCCCTCTTGGCATAGAGTTGTTATTCAAGTTCAGTTATATCTTTTTCTTTTTGTGATATCATGTGCACCATTT CTTTTCTTTGGTTAACCACGTGATTGTGTGTTATTTAAAAGTGAGAGGTTCTGCTGTTCACCCCCTTTGCATT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_74346; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_78982
| Blastp | Synaptotagmin-3 from Arabidopsis with 63.8% of identity |
|---|---|
| Blastx | Synaptotagmin-3 from Arabidopsis with 63.71% of identity |
| Eggnog | Domain-Containing protein(COG5038) |
| Kegg | Link to kegg annotations (AT5G04220) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019451085.1) |
| Pfam | Synaptotagmin-like mitochondrial-lipid-binding domain (PF17047.4) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |