| Id Trinity | FTRINITY_DN58120_c0_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_78435 |
| Sequence | CGTAAACTTATTGTTATGTAGAACGGTTGTTCTCACTTAATCATGTAGGTTTTTTAGGAATAGAAATTAATTTCTTAAATTTAAGGTGTACGACTAATAT CAGAAATCACAGCTTTACATTACTTGAACACCACCTTCTTGAATGCGTTAGAATGATGGATGATGGTGACAACTTTTCTTCAATGTCCTTAACAACACCA ACAACAAGTTCGAGGATGAGGCCGAAGTCACCGCCACCCGGGCTTTTGAATTTTCATGGGAAGCGGAAACAGCTTCTTAAGCTTCAGATTTTGGAGACAG AAATTCTTTTCCTTCAGGAGGAATTAAAATCACTTGAAGGCCTTCTACCTGCTTCAAGATGCTGCAAAGAGGTTGATGACTTTGTAGGCTCGATTTCAGA TCCCTTCACACCCAAAAAGCAGACGATCTCTCAATCCCATCACTTCAAGAAGCGGATCAGCTTTCCATCATGGATTTGCTGTTCCAACAGTTGCATGATT CATAATAAAATCACAAAAGGTTGTTTTGTATGTTGTTCATCATCAAAATCCAAATGTTCTGGCTACAACTGCTTGAAGACTACCACTCCAAGTGCCCAAA ATTGTTGCAAAGTTCCTAAGCTCTTTTCGACATATTGTGCATGTTGCCTCAGGTGCTTTTCCTGCAAAAAATCATGTGGACCCTTGTTCTAATTGTGTAG AGAATTGCTGCCATAGATGTTGTCAATAAACTAAGAAAATCACAAGTTCAAAGTCTTTATGGATTAGGAAACATTGTCAACAGAGAATGATAATCTAACA TCTTTTCTCAGTATATGGTTTTGCATTACATTTCATAAAGGAAATTGTTTTCTTATAACGAAAGGTATGGGAAGAGTGGAGAGACACAAGACACTATGTC TTGAACTAAAACCCGATAACAATTGAACTCCTGATAGTTGGGGGCTCCCTGATTGCAATCTAATCCAACAAGTGGTATGAGACATGGTGTCTCACTTATG GCTCCACTATTCCTAGTAGTTGGAGACTCCCAGTCTGTTCCAACAACATATGGTGACGGAATACTAGCACCTCAAATGTTTTGAGGGAATACTAGCAAAA ATAGTTGAAAAGCTAAAGCACACATATTTTTCCTTTGTACTTTGTAGTTTGTTTCACACTTCCTATAGACTCTGAAATTGTATCCACTTAATTTGTCCCC TCCCTCCCTTCATTTTCTTCATCTTCCACAACACCATCCAATTCTCACTCACATCAACGAAAAATCGTTTCTTGAGTTTAGTTCGGTTAGTGGGTCCATT GTTTAAATGGCAGTATGGCACCATGACCTTAATGAATATAATATTGCTAGTATTACTAAAGAAATTAGTTGCCTTCAGTCACAAGGTGATCACAGCAAAT TCAGTTCTTCCCAAACACAGTTTTGATACGGTTGGACGCCTCATGCTGCTAGCTGTGTCAAGTTTAATGCCGACATTGCACACTCATTGAAAAGGAATGA ATTGCTATTGAGAAAATGGACTTGAAACAAAGTGAAAAAGATCCTGTGATTACTCAAATTAGCATTGGTGGATTTGGCAGTGAGGTCAAAGCAAAGGATC TTGTAACATACTTGGAAGATAAAATTGGACTTGTATACAGGTGTCGGTTGAAAACTTCTTGGACACCTCCCGAGTCTTATCCAGAATTTAATATCATTAA TGCTGCACATATTACAATAACAGATGACTATCAGAAGGTTGAGCCCCATGCCTTTGTGCATTTTGTATTGCCGGGATCTGCAAAGGCAGCCTATGATGTT GCAGGTCGTTGTGATCTATCTTTGAGGAATCAACAATTAATGGTCAGCTGTGGCCCTGAAAATCCATACTTCTTGAACCAAAGGAGGAGTACTACAACTC CTTTCAAGCTGTCTGATGTAATTTTCGAAATTGGGACCTTAGTGAGCCCGGAGGAATATATTGTTGCTTGGAGAGGAACTGATAGAGGGGTCAACTTTCT GGTGGATCCTTTTGATGACATGTGCAGACTTTGTTTCAACAGAGATACTGCATTCTCATTCAAAGGAGATGTGAGAAAGGCAGTGATAAAGTGTGATTTT CAGGTGGGATTCTTAATAAGAGACATAAACGAGATCAGGCGATATAATGATACATCTCATTACATTATTTTATTACATCTGGCTTCACCACCTTTGGTTT GGTACAGGACTGCTGATGATGATATAGTAGATTCAGTTCCATTTGATTTGCTAGATGATGATGATCCTTGGATTAGGACTACTGATTTTACAACTAGTGG GGCCATCGGACGATGCAATTTTTATAAAATTTCAGTTCCACCTCGTCATGGTGCAAAACTGGAGAAGGCCATGAAATACCTGACAGGTCGAAGAGTGCAA CAGATTCAACTTAGAAGGCCACTTAGGATACGGAACGAACCTGATTTTGGAGAGCTTATGTCAGATCCCTTCTTCTGTATTCACTTTCAGGAGGGCATTA CTTTTGACATAATGTTCTTGGTCAATGCAGTCATACACAAAGGGATATTAAACCAGCACAGGGTATCAGATAGTTTTTTTGAATTACTGAGAAATCAACT TAAGGATGTTAATGTGGCTGCCCTGAAGCACTTATGGTCTTATAAGCGCCCAGTTTTTGATGCAGTTAAGAGGCTTAAAGCAGTCCAAGAATGGCTGCTT AGAAATCCGAAACTTTATGAGAGCTCTAACCTGTTAGATCATATTGTTGAGGTTAGAAGACTGGTAATTACTCCAACGAAAGGTTATTGTCTACCACCGG ATGTTGAAGTGTCCAACAGGGTTCTCAGAAAATTCAAGGATGTTTCAGATCGTTTCTTGAGAGTCACCTTTATGGATGAAGGTATGCAAACAATGAATGT GAATGCGCTTAACTACTATGTTGCTCCTATAGTAAAGCAAATCACATCCAACTCCTTTCCACAGAAAACTAAGATATATAAAAGGGTGAAAACCATTTTG GAGGACGGATTTTACTTGTGCGGCCGAAAATATTCATTTTTGGCCTTTTCATCCAATCAGCTGAGGGATCGTTCTGCATGGTTTTTTGCTGAAGACAACA ACCTATCTTGTGATAATATTAGAAGTTGGATGGGTAGGTTTAATCAAACGAATGTAGCTAAGTGTGCTGCTAGGATGGGACAATGCTTCTCGTCGACATA TGCAACTGCAGAAGTTGCAGCAAATGAAGTCAACTCCATGCTGCCTGATATTAAGAGGAATAATTATGTTTTCTCTGATGGCATTGGCATCATCTCTCCT GATCTTGCAAGTGAAGTTGCAGAAAAATTGAAATTGGATAACATACCCTCTGCTTATCAGATCAGATATGCTGGTTTTAAAGGGGTTGTAGCTTCTTGGC CTATCACAGGGGAAAAGTTCCGACTTGCTTTAAGGCCTAGTATGGACAAATTTATATCTTCTCATACTAACCTGGAGATTTGTGCTTGGACCAGATTTCA GCCCGGTTTCCTCAACAGGCAGATTATAACATTGCTTTCAGCATT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_74381; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_78435
| Blastp | RNA-dependent RNA polymerase 6 from Arabidopsis with 63.66% of identity |
|---|---|
| Blastx | RNA-dependent RNA polymerase 6 from Arabidopsis with 64.18% of identity |
| Eggnog | rna polymerase(ENOG410XQMQ) |
| Kegg | Link to kegg annotations (AT3G49500) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019437723.1) |
| Pfam | RNA dependent RNA polymerase (PF05183.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |