| Id Trinity | FTRINITY_DN58122_c2_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_78485 |
| Sequence | AATAATAGTAGCTATCTACACATATAGCACTAGACAAGAATAGATCAGAGATGTCTGAAGCATGTTCCTATGTTAGTCATTTTACAAGAATTATATAACC ATGTATGTTGCCATGTCTTTATTTTATTTTGTTCCCCTATTTATTCTTCTATATCAAGTATAGACTTTTTGAAGAACCAAGTTTGAATAATGTGATACCC TTCATGGCAATTTGGAAGTGCTTTTTTGGGTGGGTGAAAAAGCTATTATTCACTTCTGAATCAAAGGAAAAAAAGCCAAAGAAATTGAGATGTAGTGATA GAAGGTCTAAGATGAAAAAGTATCCTACAATTACTGCAACAGATAGAACATTAATAGAAGCAAAAGCTGAGCAGAGAAAACATGCTTTGAATGTGGCAAT TGCAACAGCTTCTGCTGCAGAAGCTGCAGTTGCAGCTGCTAATGCTGCTGCTGAGGTTGTCCGGTTAACAAGTGCTTCTTGTTCTTATTCATATCAATCC AATGGAGACAGGAACATGGCTGCAATCAAGATTCAAACCGCGTATCGTGCGCATCTTGCTAGAAAAGCATTAAGAGGACTGAAGGGTGTTGTGAGACTGC AAGCGATAGTACGCGGCCAAGCTGCGAGACGCGAATTGTCGAGCACTTTGAATGAATTGTCCTCTAATTCAAGGAAGGAGGTAGAAGTTCAGGAAAGATG CAATCATAGCGAAGAAGAAAGCTACAAACATGACAAGTTCAAGCAGTTTTCAAATCGAAAGAAGAGTTTGGAAGAGAAAGAAATGAAGAATGAATTTTGT AGTGAAAGAACATGGAATTACAGCTTGCACTCAAGAGAAGATGTTGAAGACACATGGTTAAGAAAGCAAGAGGCCATTTTCAAAAGAGACCGCATGAAGC AGTACTCTTATTCACACAAGGAGATAACAATTCCTCAAATGGTGGAAGTATCTGTTCTCAACAAGGAATTTGGAAGAGAAAGCAGCCATATTCTAAATCT AGGACAAAGGGTGCATAAAGAGAGAGCATCACTTCCTTCAAAGGGATGGTATAATACAACAAAAGTTGCACATAGGAACATGAAAAAACAAGATTTACAA GAAGGACTAAGTTCACAAATTTCACCCCAAAGGAAATCATTTTCTCATGGAAAGAAAAAATATGTAGTAGATGATAGTTGCATGGCAAATTCTCATGTTT TCCCTAGTTACATGGCTGTGACAGAATCCACTAAGGCAAAGGTAAGGTCATTGAGCTCACCAAGGCAAAGAAAAAGATATTTTGATGAATGTTCCAATCA TAGTGTTCCTCAGAATAAGGGAATACCCTTCTGGTCTTCTTATTATGGCACCAATGAAAATACTGAAACTTCTCAACAGAGATGCCAGGGTGCAAATTGG CATCACCATAATTTGAAGAGATGCTGAGCACTGTTCCAACCAACCCTTTAAGTCATCAACATGCAAGCACAAACACTTCACAATAGTTGTCATATTTATG TTGTATTTGACATCCATGCTTCCTTGGTCATCAAAAAAGTGTAAGGGCAAAGTTACTAGCTAGGTTCATTATTTCATGTTTGGTCTATCAAATTTTGAAG GATTGAAGGGCTCTCTTGAATAGTAGAATGAATATCATATTGGTATTATGTATGATGTATAAAAAATGATGTATACATACATACATATATATATATATAT TATTCTATACAGAACAAGGAACCATTTATATATGAAGTCTGATGAAAAAAAGTGTTGCAAAAAAACAAGTGGGGGATCATTAACACCAAAGTCTAATCAG TTGTGAAAAGAGCACAGACTCAGTTATCTTTATGGAGACTAAGGTTAATGTTCAAATTATTTGGATTTTTTAGTATCAAGTTATGGAATAGATTATTTAC ATCTAAGCACACTATTTATTAATATGGAGCAATCTAAGGAGAATGACCAATTACAATTATTACTATGTTCATAGCAAATTAACATTGTATATCCCATACC TAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_74394; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_78485
| Blastp | Protein IQ-DOMAIN 1 from Arabidopsis with 27.69% of identity |
|---|---|
| Blastx | Protein IQ-DOMAIN 14 from Arabidopsis with 31.62% of identity |
| Eggnog | NA(ENOG411040N) |
| Kegg | Link to kegg annotations (AT3G09710) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019426121.1) |
| Pfam | IQ calmodulin-binding motif (PF00612.26) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |