Ll_transcript_79263

• Id Trinity: FTRINITY_DN58128_c1_g1_i11
• Name Transcript: Ll_transcript_79263
• Sequence: AACACCCTTTTTATAAACTTCCACAAACTTAGGATTCACAAGTATCAGCGCACGTTAGAACAACCCAATGACAACATCATCAACCGGGTCGGGTTGTATA TTATGGTTTCGAAAGGGTCTTCGGATCCATCACAACCCGGCTCTTCAATTCGCTTCCCAAAATGGGGTTTCTAATCTTTACCCACTTTTTGTTATCGACC CCAATTACATCAAACCCGACCCGAATTCATTCTCTCCCGGGTCGACCCGGTCGGGTCTTAACCGAATCAAGTTCTTACTTCAGAGCCTTGTGGACCTTGA TTTCAATCTTAACAAACTTGGCTCGCGTCTTCTTATTCTTAAGGGTGATCCTGTAAAGGTTCTTATTCGTTGCTTCAAAGAGTGGAATATCAGAAAGCTA TGCTTTGAGTTTGACACTGAACCATATTATCAGGCTCTGGATATTGAAGTTAAGAACTTTGCACTGGCAGAGGGAATTGAGGTTTTCTCCCCTGTAAGTC ACACACTCTTCAACCCCAAGGATATTATAGAGAAGAATGGAGGAAAGCCGCCCCTTAGTTATCAATCATTTATCAAGCTTGCCGGGGAGCCGCTACCCCC TCTCCCAACCAAGCACTCTTCACTTCCTCCAGTTGGCCATCTTGGAACTTGTGATGTTTTTGAAGTTCCATCGATCAAAGATCTTGGATATGAAGACGCT AAACAGGATGAGTTCTCTCCTTTCAAAGGCGGTGAATCAGAAGCGTTGAAGAGGTTGGCAGAGTGTATGAAAGACAAGGTGTGGGTGGCAAACTTTGAGA AACCCAATGGTAATCCATCTGCATTTCTTAAGCCAGCAACAACTGTTTTATCACCTTACTTGAAATTTGGTTGTCTCTCTTCCAGTTATTTCTACCAGCA AATTCAGGATGTATATAAAACTATGCCTAAGCATACATCACCACCTGTTTCTCTTCTAGGACAGTTGTTGTGGCGAGACTTCTTTTACACGGCAGCTTTT GGGACTCCGAACTTCGATAGAATGAAAGGCAATAGGATATGCAAGCAAATTCCGTGGAAGGATGATGATAAATTGCTGGAGGCTTGGAGGGAGGCTAGGA CAGGATTTCCTTGGATTGATGCTATCATGGTCCAGCTACGCAAGTGGGGTTGGATACATCATCTGGCACGGCACTCTGTTGCGTGCTTTCTAACTCGAGG TGATCTGTTTGTTCATTGGGAAAAAGGACGTGATGTTTTTGAGCGACTTCTGATTGATTCAGATTGGGCCATTAACAATGGAAACTGGTTGTGGCTCTCA TGTTCATCCTTCTTTTATCAGTACCATCGTATTTATTCCCCAATTACATTTGGCAAGAAGTATGACCCTAATGGTGACTACATTAGGCATTTTCTCCCGG TCTTAAAAGATATGCCCAAGGAGTACATTTATGAACCATGGACTGCTCCTCTAAGCATCCAGACCAAAGCAAAATGCATAATTGGCAAAGACTATCCGAT GCCAGGTCAGTTTCGTAATTTAGGGCACGTCCTTTTATAGAGCTTTCAGCATTTGGTAATTTGTATCCTCCTGTGTTCTTCAATCCATATAATTGGGTTT CTTTGAGTTTGTATTTAAAGTCTGTTGTGAACTATTTTGGTTGTAAATTGTGGTTACGAACTTACTTATGTTGTGATGCAATACCGATTGTCATTATCAC GATGTGGTTTGCCGCTGTTACAGTTTGAATCTGTTGTGGCATGATGCGGTCCAATGCAATTGAATTACTATGATTCAGATCAGAATCATGTCTTAATTTG TGGGGTCATGTGTTCACTACATTGAAAGATTTGTTTTGTTTTATGTTCTAAAACTATTTGCATGTCTAAATTCAACATGTATTGGTTTGTAAGGGACTTT CTTATATATGCTCTATAAGTTGTGTTTCAGTTGTTTCCCATGATTCTGCAAGTAAAGAATGCCGACGGAAAATGCGCGAAGCATACGCGATGAACAAAGA ATTGAAGGGTTTGGTTAGTGAGGATGATCTGAAGAAGTTAAGAAGAAAATTAGATGAAAGTGTAGAGCAAGGGGGAAAAGCTAAAAGATCAAGACAATAA GTGATTGTGGGTGAGAGATAAATTTGCTGGTTTTTTTCCTCATACTACCATGCTTTATATTAGGCATTACCTTTTGTATCACACTATCTATCATGTAGTA TATATTTTTTATATATATATTACTTTCGGGGTATATCATTTTCGGGGTACATGGAACCATAAACTACTAGACCAACACATTCCAGAACTCGATTATTTTA TTAGAAGATAATTTAAAAAATATATATTACCATATGTGTATTGGACCGAATTGGCCTGCATGGATATATGAGATTTCAAATATGCCAAATTGTCTCAAGC AATTATTATTTGCATGTAGAAGCAATTAATTAATTAATTTGGTTAAAAAGTTATCTTTTTTTTTTAAATTACAAATTCATAGGCTGTAACCCCATCATTA GTAGATTTAAAGAATGAAATAATCTTTAAGTTTTAGATCAGTAAAATGCTTTAAACCAAGGATTTTATATGTGTGAACTGATAGTGTAAGTGTTTTTTAT ACTGTTAGCAAATCATTCACCATTGATTTGTTAACCATGATTGAACGTCTAACAAAAGTAATACAAACCAAACGGTTATGAAAAACTTTACAATATTGTA CAAATTTTAAATTCTTAAAACCAGTAACCATGAAGAATGATATTGTCTAGTGGTTTAGCACATTGGATTTGATTTCACTAAAACCACACACATTAAATGA CATGGTTCAAGAATAAAGAATGTATTGCAAAACAAAATAGAAATGTATTGAAAATAGTGGAAATGTTTCTTTTAACAAAATATATTTATTATTTTCTTGT CCAGCCCTAATTTTAAAGATTTGTATGAAAATAGTGAAAGTAAAAAATAAAGTGATTTTATAAGAAGAAAAGAAAATTGATATATTTATGAAATCTATTG TTGTGTTGTATCATTGAAAAACAACAAAGAACCCTATCACTCTATCTCATTTCTGAGTTTGAAAACGACACCGTTCGCAACATCGTTGGGCGTGACCTGA GAACAATCATGTATCGTAGACTTCTCTCTTCTCACCTCAAAACCCTAACTTCTCTCTCTCCGGCCCGATCTGCTTCCTCCGCCGCCATCGCCGCCGCCGC TCCTCCCGCACTCTCTTCCCTCTCCCGCCGCCACTTTTCCGATGACACGAGTGCGGTAAAAAAGAAGGTTGAAGATGTTGTGCCAATCGCTACTGGTCAC GAGCGTGAGGAAATTCAAGCTCAACTTGAGGGAAGGGATATTCTTGAAATAGACCACCCTGAAGGTCCTTTTGGCACAAAGGAAGAACCTGCAGTTGTCA AATCTTACTATGATAAAAGAATAGTCGGGTGCCCAGGAGGTGAAGGCGAGGATGAGCATGATGTTGTCTGGTTTTGGCTGGAGAAAGGCAAACCTCATGA ATGTCCAGTGTGCTCACAGTATTTTGTGCTTGAAGTAGTGGGACCTGGTGGATCACCCTATGGACATGGCGACGGCGACGAAGATCATCACCATTGATTG CATGCTTCAAATTTCCTTCCGGAATAAGTTCAGGAAAGATAGAAACATTGTTTAGCAAACATAAGTCCTTTCAAAGCCTGTGTTTGGTTTTGATTTATAA TATTTTGTGTTGTTGCAACTTTGAAGGTACAGTTTCTGTGATTATTAGACACATGTTGCTCATTTGCTTGAGGTATCAGATTCTTGTATTATGTTTTGTG CACTGTGAAATAATTGATAACCACTTGATGATTCTTTGACATTAATATATCTGTTTAAATAGAAAA
• Tissue: flowers
• Gene name: LI_gene_74444;
• Additional information: details;

Expression of Ll_transcript_79263

FPKM

• FPAB: 10.7
• FPNAB: 13.7
• LF1: 10.4
• LF2: 11.3
• LF3: 9.6
• LF4: 14.1
• UF1: 9.8
• UF2: 10.3
• UF3: 13.6
• UF4: 12.3

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_79263

• Blastp: (6-4)DNA photolyase from Arabidopsis with 72.2% of identity
• Blastx: (6-4)DNA photolyase from Arabidopsis with 72.31% of identity
• Eggnog: deoxyribo-dipyrimidine photolyase(COG0415)
• Kegg: Link to kegg annotations (AT3G15620)
• CantataDB: Link to cantataDB annotations (CNT0001633)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019430002.1)
• Pfam: DNA photolyase (PF00875.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;