| Id Trinity | FTRINITY_DN58128_c1_g1_i14 |
|---|---|
| Name Transcript | Ll_transcript_79266 |
| Sequence | AACACCCTTTTTATAAACTTCCACAAACTTAGGATTCACAAGTATCAGCGCACGTTAGAACAACCCAATGACAACATCATCAACCGGGTCGGGTTGTATA TTATGGTTTCGAAAGGGTCTTCGGATCCATCACAACCCGGCTCTTCAATTCGCTTCCCAAAATGGGGTTTCTAATCTTTACCCACTTTTTGTTATCGACC CCAATTACATCAAACCCGACCCGAATTCATTCTCTCCCGGGTCGACCCGGTCGGGTCTTAACCGAATCAAGTTCTTACTTCAGAGCCTTGTGGACCTTGA TTTCAATCTTAACAAACTTGGCTCGCGTCTTCTTATTCTTAAGGGTGATCCTGTAAAGGTTCTTATTCGTTGCTTCAAAGAGTGGAATATCAGAAAGCTA TGCTTTGAGTTTGACACTGAACCATATTATCAGGCTCTGGATATTGAAGTTAAGAACTTTGCACTGGCAGAGGGAATTGAGGTTTTCTCCCCTGTAAGTC ACACACTCTTCAACCCCAAGGATATTATAGAGAAGAATGGAGGAAAGCCGCCCCTTAGTTATCAATCATTTATCAAGCTTGCCGGGGAGCCGCTACCCCC TCTCCCAACCAAGCACTCTTCACTTCCTCCAGTTGGCCATCTTGGAACTTGTGATGTTTTTGAAGTTCCATCGATCAAAGATCTTGGATATGAAGACGCT AAACAGGTGCTCTTATCATATTCTAGATTATAACTCTTCATGGGCACCTAATGAGAGAAGCTATATTCAGGATGAGTTCTCTCCTTTCAAAGGCGGTGAA TCAGAAGCGTTGAAGAGGTTGGCAGAGTGTATGAAAGACAAGGTGTGGGTGGCAAACTTTGAGAAACCCAATGGTAATCCATCTGCATTTCTTAAGCCAG CAACAACTGTTTTATCACCTTACTTGAAATTTGGTTGTCTCTCTTCCAGTTATTTCTACCAGCAAATTCAGGATGTATATAAAACTATGCCTAAGCATAC ATCACCACCTGTTTCTCTTCTAGGACAGTTGTTGTGGCGAGACTTCTTTTACACGGCAGCTTTTGGGACTCCGAACTTCGATAGAATGAAAGGCAATAGG ATATGCAAGCAAATTCCGTGGAAGGATGATGATAAATTGCTGGAGGCTTGGAGGGAGGCTAGGACAGGATTTCCTTGGATTGATGCTATCATGGTCCAGG TTTGGGTTCTAAAATCGTTTTTTCCTCCAAATGAAGCAATAACCAATAGTTGTATTACTTTGAAGCTGCATAGGTGCTCAAATCTAGTCCACCACAATAT TTTCATTAGCCTTCTCAGGAAGTGCATTTGAATCTGTAATTTTCGGTTGTAGCTACGCAAGTGGGGTTGGATACATCATCTGGCACGGCACTCTGTTGCG TGCTTTCTAACTCGAGGTGATCTGTTTGTTCATTGGGAAAAAGGACGTGATGTTTTTGAGCGACTTCTGATTGATTCAGATTGGGCCATTAACAATGGAA ACTGGTTGTGGCTCTCATGTTCATCCTTCTTTTATCAGTACCATCGTATTTATTCCCCAATTACATTTGGCAAGAAGTATGACCCTAATGGTGACTACAT TAGGCATTTTCTCCCGGTCTTAAAAGATATGCCCAAGGAGTACATTTATGAACCATGGACTGCTCCTCTAAGCATCCAGACCAAAGCAAAATGCATAATT GGCAAAGACTATCCGATGCCAGGTCAGTTTCGTAATTTAGGGCACGTCCTTTTATAGAGCTTTCAGCATTTGGTAATTTGTATCCTCCTGTGTTCTTCAA TCCATATAATTGGGTTTCTTTGAGTTTGTATTTAAAGTCTGTTGTGAACTATTTTGGTTGTAAATTGTGGTTACGAACTTACTTATGTTGTGATGCAATA CCGATTGTCATTATCACGATGTGGTTTGCCGCTGTTACAGTTTGAATCTGTTGTGGCATGATGCGGTCCAATGCAATTGAATTACTATGATTCAGATCAG AATCATGTCTTAATTTGTGGGGTCATGTGTTCACTACATTGAAAGATTTGTTTTGTTTTATGTTCTAAAACTATTTGCATGTCTAAATTCAACATGTATT GGTTTGTAAGGGACTTTCTTATATATGCTCTATAAGTTGTGTTTCAGTTGTTTCCCATGATTCTGCAAGTAAAGAATGCCGACGGAAAATGCGCGAAGCA TACGCGATGAACAAAGAATTGAAGGGTTTGGTTAGTGAGGATGATCTGAAGAAGTTAAGAAGAAAATTAGATGAAAGTGTAGAGCAAGGGGGAAAAGCTA AAAGATCAAGACAATAAGTGATTGTGGGTGAGAGATAAATTTGCTGGTTTTTTTCCTCATACTACCATGCTTTATATTAGGCATTACCTTTTGTATCACA CTATCTATCATGTAGTATATATTTTTTATATATATATTACTTTCGGGGTATATCATTTTCGGGGTACATGGAACCATAAACTACTAGACCAACACATTCC AGAACTCGATTATTTTATTAGAAGATAATTTAAAAAATATATATTACCATATGTGTATTGGACCGAATTGGCCTGCATGGATATATGAGATTTCAAATAT GCCAAATTGTCTCAAGCAATTATTATTTGCATGTAGAAGCAATTAATTAATTAATTTGGTTAAAAAGTTATCTTTTTTTTTTAAATTACAAATTCATAGG CTGTAACCCCATCATTAGTAGATTTAAAGAATGAAATAATCTTTAAGTTTTAGATCAGTAAAATGCTTTAAACCAAGGATTTTATATGTGTGAACTGATA GTGTAAGTGTTTTTTATACTGTTAGCAAATCATTCACCATTGATTTGTTAACCATGATTGAACGTCTAACAAAAGTAATACAAACCAAACGGTTATGAAA AACTTTACAATATTGTACAAATTTTAAATTCTTAAAACCAGTAACCATGAAGAATGATATTGTCTAGTGGTTTAGCACATTGGATTTGATTTCACTAAAA CCACACACATTAAATGACATGGTTCAAGAATAAAGAATGTATTGCAAAACAAAATAGAAATGTATTGAAAATAGTGGAAATGTTTCTTTTAACAAAATAT ATTTATTATTTTCTTGTCCAGCCCTAATTTTAAAGATTTGTATGAAAATAGTGAAAGTAAAAAATAAAGTGATTTTATAAGAAGAAAAGAAAATTGATAT ATTTATGAAATCTATTGTTGTGTTGTATCATTGAAAAACAACAAAGAACCCTATCACTCTATCTCATTTCTGAGTTTGAAAACGACACCGTTCGCAACAT CGTTGGGCGTGACCTGAGAACAATCATGTATCGTAGACTTCTCTCTTCTCACCTCAAAACCCTAACTTCTCTCTCTCCGGCCCGATCTGCTTCCTCCGCC GCCATCGCCGCCGCCGCTCCTCCCGCACTCTCTTCCCTCTCCCGCCGCCACTTTTCCGATGACACGAGTGCGGTAAAAAAGAAGGTTGAAGATGTTGTGC CAATCGCTACTGGTCACGAGCGTGAGGAAATTCAAGCTCAACTTGAGGGAAGGGATATTCTTGAAATAGACCACCCTGAAGGTCCTTTTGGCACAAAGGA AGAACCTGCAGTTGTCAAATCTTACTATGATAAAAGAATAGTCGGGTGCCCAGGAGGTGAAGGCGGTGAGTTTTCCTGATCTATCTTAATGTATCCTTGT ATCCATGATTCTCCACAAGTTGATGAAAAATTCCAGAATTCTGGTTATAGCACTGACGAGGTGAACACCGGTTTGATTTCAGAGGATGAGCATGATGTTG TCTGGTTTTGGCTGGAGAAAGGCAAACCTCATGAATGTCCAGTGTGCTCACAGTATTTTGTGGTAAGTTGCGAATCACATTTAGTGTATTTAGTATATCT TTTAGACTTACCGTAACACTTGTGGGTTTAAATGCCATAATATGTAAAAACATGTTTGAAAATTACGTACTTGTTTGCTTGCACTTTTGCATACCGATCG TCAAGGATCATTGCTTGTTATTGACTTCACTGACTGAGGCTTATCCTGTAAAATATTGTTTTGAGAAGCTTTTAGTTCCTTTAACTTTAACTAATATTCC ACCCAATTGTGAAAGTAATATAATTGTGAGAAGCAACCATTCCATAGGGATCGAGTACATCAATTACCGATTCACTCATTTCAACACTGTCTAGACTATT CTGAATGTTAACTAGTTTGTTATCTGGCATTGTTGCTTGGTTTGTGTTTTTAGCTTATTGTTGTTTGAGCTGGTCCCTATGTTATCAAGGACTGAAATTC AAAATGAAATGCCTATGGAAAAGTAGTTTTTTTTCTTGATATTGTTTTAAAGGAATAGGTGGAGAATAATTCAAGTAATGCACCACATTTGTTTATTTAA AGTTTAAACTATTGTCATGTGTCCAGGTTTTGGTTGAATGAATTGTCTGTTAGAAAAAAAAACTTCAATTAAATTCTTGTCACCTATTTAGAACATTAAG TGGATGATAATTAAATGTCTGTTTACAGAAAGTGGCCCTGATTATTATCCCTTTTTTTACTTAACAGCTTGAAGTAGTGGGACCTGGTGGATCACCCTAT GGACATGGCGACGGCGACGAAGATCATCACCATTGATTGCATGCTTCAAATTTCCTTCCGGAATAAGTTCAGGAAAGATAGAAACATTGTTTAGCAAACA TAAGTCCTTTCAAAGCCTGTGTTTGGTTTTGATTTATAATATTTTGTGTTGTTGCAACTTTGAAGGTACAGTTTCTGTGATTATTAGACACATGTTGCTC ATTTGCTTGAGGTATCAGATTCTTGTATTATGTTTTGTGCACTGTGAAATAATTGATAACCACTTGATGATTCTTTGACATTAATATATCTGTTTAAATA GAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_74444; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_79266
| Blastp | (6-4)DNA photolyase from Arabidopsis with 75.17% of identity |
|---|---|
| Blastx | (6-4)DNA photolyase from Arabidopsis with 67.92% of identity |
| Eggnog | deoxyribo-dipyrimidine photolyase(COG0415) |
| Kegg | Link to kegg annotations (AT3G15620) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019430002.1) |
| Pfam | FAD binding domain of DNA photolyase (PF03441.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |