| Id Trinity | FTRINITY_DN58128_c1_g1_i15 |
|---|---|
| Name Transcript | Ll_transcript_79267 |
| Sequence | AACACCCTTTTTATAAACTTCCACAAACTTAGGATTCACAAGTATCAGCGCACGTTAGAACAACCCAATGACAACATCATCAACCGGGTCGGGTTGTATA TTATGGTTTCGAAAGGGTCTTCGGATCCATCACAACCCGGCTCTTCAATTCGCTTCCCAAAATGGGGTTTCTAATCTTTACCCACTTTTTGTTATCGACC CCAATTACATCAAACCCGACCCGAATTCATTCTCTCCCGGGTCGACCCGGTCGGGTCTTAACCGAATCAAGTTCTTACTTCAGAGCCTTGTGGACCTTGA TTTCAATCTTAACAAACTTGGCTCGCGTCTTCTTATTCTTAAGGGTGATCCTGTAAAGGTTCTTATTCGTTGCTTCAAAGAGTGGAATATCAGAAAGCTA TGCTTTGAGTTTGACACTGAACCATATTATCAGGCTCTGGATATTGAAGTTAAGAACTTTGCACTGGCAGAGGGAATTGAGGTTTTCTCCCCTGTAAGTC ACACACTCTTCAACCCCAAGGATATTATAGAGAAGAATGGAGGAAAGCCGCCCCTTAGTTATCAATCATTTATCAAGCTTGCCGGGGAGCCGCTACCCCC TCTCCCAACCAAGCACTCTTCACTTCCTCCAGTTGGCCATCTTGGAACTTGTGATGTTTTTGAAGTTCCATCGATCAAAGATCTTGGATATGAAGACGCT AAACAGGTGCTCTTATCATATTCTAGATTATAACTCTTCATGGGCACCTAATGAGAGAAGCTATATTCAGGATGAGTTCTCTCCTTTCAAAGGCGGTGAA TCAGAAGCGTTGAAGAGGTTGGCAGAGTGTATGAAAGACAAGGTGTGGGTGGCAAACTTTGAGAAACCCAATGGTAATCCATCTGCATTTCTTAAGCCAG CAACAACTGTTTTATCACCTTACTTGAAATTTGGTTGTCTCTCTTCCAGTTATTTCTACCAGCAAATTCAGGATGTATATAAAACTATGCCTAAGCATAC ATCACCACCTGTTTCTCTTCTAGGACAGTTGTTGTGGCGAGACTTCTTTTACACGGCAGCTTTTGGGACTCCGAACTTCGATAGAATGAAAGGCAATAGG ATATGCAAGCAAATTCCGTGGAAGGATGATGATAAATTGCTGGAGGCTTGGAGGGAGGCTAGGACAGGATTTCCTTGGATTGATGCTATCATGGTCCAGC TACGCAAGTGGGGTTGGATACATCATCTGGCACGGCACTCTGTTGCGTGCTTTCTAACTCGAGGTGATCTGTTTGTTCATTGGGAAAAAGGACGTGATGT TTTTGAGCGACTTCTGATTGATTCAGATTGGGCCATTAACAATGGAAACTGGTTGTGGCTCTCATGTTCATCCTTCTTTTATCAGTACCATCGTATTTAT TCCCCAATTACATTTGGCAAGAAGTATGACCCTAATGGTGACTACATTAGGCATTTTCTCCCGGTCTTAAAAGATATGCCCAAGGAGTACATTTATGAAC CATGGACTGCTCCTCTAAGCATCCAGACCAAAGCAAAATGCATAATTGGCAAAGACTATCCGATGCCAGGTCAGTTTCGTAATTTAGGGCACGTCCTTTT ATAGAGCTTTCAGCATTTGGTAATTTGTATCCTCCTGTGTTCTTCAATCCATATAATTGGGTTTCTTTGAGTTTGTATTTAAAGTCTGTTGTGAACTATT TTGGTTGTAAATTGTGGTTACGAACTTACTTATGTTGTGATGCAATACCGATTGTCATTATCACGATGTGGTTTGCCGCTGTTACAGTTTGAATCTGTTG TGGCATGATGCGGTCCAATGCAATTGAATTACTATGATTCAGATCAGAATCATGTCTTAATTTGTGGGGTCATGTGTTCACTACATTGAAAGATTTGTTT TGTTTTATGTTCTAAAACTATTTGCATGTCTAAATTCAACATGTATTGGTTTGTAAGGGACTTTCTTATATATGCTCTATAAGTTGTGTTTCAGTTGTTT CCCATGATTCTGCAAGTAAAGAATGCCGACGGAAAATGCGCGAAGCATACGCGATGAACAAAGAATTGAAGGGTTTGGTTAGTGAGGATGATCTGAAGAA GTTAAGAAGAAAATTAGATGAAAGTGTAGAGCAAGGGGGAAAAGCTAAAAGATCAAGACAATAAGTGATTGTGGGTGAGAGATAAATTTGCTGGTTTTTT TCCTCATACTACCATGCTTTATATTAGGCATTACCTTTTGTATCACACTATCTATCATGTAGTATATATTTTTTATATATATATTACTTTCGGGGTATAT CATTTTCGGGGTACATGGAACCATAAACTACTAGACCAACACATTCCAGAACTCGATTATTTTATTAGAAGATAATTTAAAAAATATATATTACCATATG TGTATTGGACCGAATTGGCCTGCATGGATATATGAGATTTCAAATATGCCAAATTGTCTCAAGCAATTATTATTTGCATGTAGAAGCAATTAATTAATTA ATTTGGTTAAAAAGTTATCTTTTTTTTTTAAATTACAAATTCATAGGCTGTAACCCCATCATTAGTAGATTTAAAGAATGAAATAATCTTTAAGTTTTAG ATCAGTAAAATGCTTTAAACCAAGGATTTTATATGTGTGAACTGATAGTGTAAGTGTTTTTTATACTGTTAGCAAATCATTCACCATTGATTTGTTAACC ATGATTGAACGTCTAACAAAAGTAATACAAACCAAACGGTTATGAAAAACTTTACAATATTGTACAAATTTTAAATTCTTAAAACCAGTAACCATGAAGA ATGATATTGTCTAGTGGTTTAGCACATTGGATTTGATTTCACTAAAACCACACACATTAAATGACATGGTTCAAGAATAAAGAATGTATTGCAAAACAAA ATAGAAATGTATTGAAAATAGTGGAAATGTTTCTTTTAACAAAATATATTTATTATTTTCTTGTCCAGCCCTAATTTTAAAGATTTGTATGAAAATAGTG AAAGTAAAAAATAAAGTGATTTTATAAGAAGAAAAGAAAATTGATATATTTATGAAATCTATTGTTGTGTTGTATCATTGAAAAACAACAAAGAACCCTA TCACTCTATCTCATTTCTGAGTTTGAAAACGACACCGTTCGCAACATCGTTGGGCGTGACCTGAGAACAATCATGTATCGTAGACTTCTCTCTTCTCACC TCAAAACCCTAACTTCTCTCTCTCCGGCCCGATCTGCTTCCTCCGCCGCCATCGCCGCCGCCGCTCCTCCCGCACTCTCTTCCCTCTCCCGCCGCCACTT TTCCGATGACACGAGTGCGGTAAAAAAGAAGGTTGAAGATGTTGTGCCAATCGCTACTGGTCACGAGCGTGAGGAAATTCAAGCTCAACTTGAGGGAAGG GATATTCTTGAAATAGACCACCCTGAAGGTCCTTTTGGCACAAAGGAAGAACCTGCAGTTGTCAAATCTTACTATGATAAAAGAATAGTCGGGTGCCCAG GAGGTGAAGGCGGTGAGTTTTCCTGATCTATCTTAATGTATCCTTGTATCCATGATTCTCCACAAGTTGATGAAAAATTCCAGAATTCTGGTTATAGCAC TGACGAGGTGAACACCGGTTTGATTTCAGAGGATGAGCATGATGTTGTCTGGTTTTGGCTGGAGAAAGGCAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_74444; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_79267
| Blastp | (6-4)DNA photolyase from Oryza sativa with 81.65% of identity |
|---|---|
| Blastx | (6-4)DNA photolyase from Arabidopsis with 80.9% of identity |
| Eggnog | deoxyribo-dipyrimidine photolyase(COG0415) |
| Kegg | Link to kegg annotations (4328669) |
| CantataDB | Link to cantataDB annotations (CNT0001633) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019430002.1) |
| Pfam | FAD binding domain of DNA photolyase (PF03441.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |