| Id Trinity | FTRINITY_DN58128_c1_g1_i27 |
|---|---|
| Name Transcript | Ll_transcript_79287 |
| Sequence | AACACCCTTTTTATAAACTTCCACAAACTTAGGATTCACAAGTATCAGCGCACGTTAGAACAACCCAATGACAACATCATCAACCGGGTCGGGTTGTATA TTATGGTTTCGAAAGGGTCTTCGGATCCATCACAACCCGGCTCTTCAATTCGCTTCCCAAAATGGGGTTTCTAATCTTTACCCACTTTTTGTTATCGACC CCAATTACATCAAACCCGACCCGAATTCATTCTCTCCCGGGTCGACCCGGTCGGGTCTTAACCGAATCAAGTTCTTACTTCAGAGCCTTGTGGACCTTGA TTTCAATCTTAACAAACTTGGCTCGCGTCTTCTTATTCTTAAGGGTGATCCTGTAAAGGTTCTTATTCGTTGCTTCAAAGAGTGGAATATCAGAAAGCTA TGCTTTGAGTTTGACACTGAACCATATTATCAGGCTCTGGATATTGAAGTTAAGAACTTTGCACTGGCAGAGGGAATTGAGGTTTTCTCCCCTGTAAGTC ACACACTCTTCAACCCCAAGGATATTATAGAGAAGAATGGAGGAAAGCCGCCCCTTAGTTATCAATCATTTATCAAGCTTGCCGGGGAGCCGCTACCCCC TCTCCCAACCAAGCACTCTTCACTTCCTCCAGTTGGCCATCTTGGAACTTGTGATGTTTTTGAAGTTCCATCGATCAAAGATCTTGGATATGAAGACGCT AAACAGGATGAGTTCTCTCCTTTCAAAGGCGGTGAATCAGAAGCGTTGAAGAGGTTGGCAGAGTGTATGAAAGACAAGGTGTGGGTGGCAAACTTTGAGA AACCCAATGGTAATCCATCTGCATTTCTTAAGCCAGCAACAACTGTTTTATCACCTTACTTGAAATTTGGTTGTCTCTCTTCCAGTTATTTCTACCAGCA AATTCAGGATGTATATAAAACTATGCCTAAGCATACATCACCACCTGTTTCTCTTCTAGGACAGTTGTTGTGGCGAGACTTCTTTTACACGGCAGCTTTT GGGACTCCGAACTTCGATAGAATGAAAGGCAATAGGATATGCAAGCAAATTCCGTGGAAGGATGATGATAAATTGCTGGAGGCTTGGAGGGAGGCTAGGA CAGGATTTCCTTGGATTGATGCTATCATGGTCCAGGTTTGGGTTCTAAAATCGTTTTTTCCTCCAAATGAAGCAATAACCAATAGTTGTATTACTTTGAA GCTGCATAGGTGCTCAAATCTAGTCCACCACAATATTTTCATTAGCCTTCTCAGGAAGTGCATTTGAATCTGTAATTTTCGGTTGTAGCTACGCAAGTGG GGTTGGATACATCATCTGGCACGGCACTCTGTTGCGTGCTTTCTAACTCGAGGTGATCTGTTTGTTCATTGGGAAAAAGGACGTGATGTTTTTGAGCGAC TTCTGATTGATTCAGATTGGGCCATTAACAATGGAAACTGGTTGTGGCTCTCATGTTCATCCTTCTTTTATCAGTACCATCGTATTTATTCCCCAATTAC ATTTGGCAAGAAGTATGACCCTAATGGTGACTACATTAGGCATTTTCTCCCGGTCTTAAAAGATATGCCCAAGGAGTACATTTATGAACCATGGACTGCT CCTCTAAGCATCCAGACCAAAGCAAAATGCATAATTGGCAAAGACTATCCGATGCCAGGTCAGTTTCGTAATTTAGGGCACGTCCTTTTATAGAGCTTTC AGCATTTGGTAATTTGTATCCTCCTGTGTTCTTCAATCCATATAATTGGGTTTCTTTGAGTTTGTATTTAAAGTCTGTTGTGAACTATTTTGGTTGTAAA TTGTGGTTACGAACTTACTTATGTTGTGATGCAATACCGATTGTCATTATCACGATGTGGTTTGCCGCTGTTACAGTTTGAATCTGTTGTGGCATGATGC GGTCCAATGCAATTGAATTACTATGATTCAGATCAGAATCATGTCTTAATTTGTGGGGTCATGTGTTCACTACATTGAAAGATTTGTTTTGTTTTATGTT CTAAAACTATTTGCATGTCTAAATTCAACATGTATTGGTTTGTAAGGGACTTTCTTATATATGCTCTATAAGTTGTGTTTCAGTTGTTTCCCATGATTCT GCAAGTAAAGAATGCCGACGGAAAATGCGCGAAGCATACGCGATGAACAAAGAATTGAAGGGTTTGGTTAGTGAGGATGATCTGAAGAAGTTAAGAAGAA AATTAGATGAAAGTGTAGAGCAAGGGGGAAAAGCTAAAAGATCAAGACAATAAGTGATTGTGGGTGAGAGATAAATTTGCTGGTTTTTTTCCTCATACTA CCATGCTTTATATTAGGCATTACCTTTTGTATCACACTATCTATCATGTAGTATATATTTTTTATATATATATTACTTTCGGGGTATATCATTTTCGGGG TACATGGAACCATAAACTACTAGACCAACACATTCCAGAACTCGATTATTTTATTAGAAGATAATTTAAAAAATATATATTACCATATGTGTATTGGACC GAATTGGCCTGCATGGATATATGAGATTTCAAATATGCCAAATTGTCTCAAGCAATTATTATTTGCATGTAGAAGCAATTAATTAATTAATTTGGTTAAA AAGTTATCTTTTTTTTTTAAATTACAAATTCATAGGCTGTAACCCCATCATTAGTAGATTTAAAGAATGAAATAATCTTTAAGTTTTAGATCAGTAAAAT GCTTTAAACCAAGGATTTTATATGTGTGAACTGATAGTGTAAGTGTTTTTTATACTGTTAGCAAATCATTCACCATTGATTTGTTAACCATGATTGAACG TCTAACAAAAGTAATACAAACCAAACGGTTATGAAAAACTTTACAATATTGTACAAATTTTAAATTCTTAAAACCAGTAACCATGAAGAATGATATTGTC TAGTGGTTTAGCACATTGGATTTGATTTCACTAAAACCACACACATTAAATGACATGGTTCAAGAATAAAGAATGTATTGCAAAACAAAATAGAAATGTA TTGAAAATAGTGGAAATGTTTCTTTTAACAAAATATATTTATTATTTTCTTGTCCAGCCCTAATTTTAAAGATTTGTATGAAAATAGTGAAAGTAAAAAA TAAAGTGATTTTATAAGAAGAAAAGAAAATTGATATATTTATGAAATCTATTGTTGTGTTGTATCATTGAAAAACAACAAAGAACCCTATCACTCTATCT CATTTCTGAGTTTGAAAACGACACCGTTCGCAACATCGTTGGGCGTGACCTGAGAACAATCATGTATCGTAGACTTCTCTCTTCTCACCTCAAAACCCTA ACTTCTCTCTCTCCGGCCCGATCTGCTTCCTCCGCCGCCATCGCCGCCGCCGCTCCTCCCGCACTCTCTTCCCTCTCCCGCCGCCACTTTTCCGATGACA CGAGTGCGGTAAAAAAGAAGGTTGAAGATGTTGTGCCAATCGCTACTGGTCACGAGCGTGAGGAAATTCAAGCTCAACTTGAGGGAAGGGATATTCTTGA AATAGACCACCCTGAAGGTCCTTTTGGCACAAAGGAAGAACCTGCAGTTGTCAAATCTTACTATGATAAAAGAATAGTCGGGTGCCCAGGAGGTGAAGGC GGTGAGTTTTCCTGATCTATCTTAATGTATCCTTGTATCCATGATTCTCCACAAGTTGATGAAAAATTCCAGAATTCTGGTTATAGCACTGACGAGGTGA ACACCGGTTTGATTTCAGAGGATGAGCATGATGTTGTCTGGTTTTGGCTGGAGAAAGGCAAACCTCATGAATGTCCAGTGTGCTCACAGTATTTTGTGGT AAGTTGCGAATCACATTTAGTGTATTTAGTATATCTTTTAGACTTACCGTAACACTTGTGGGTTTAAATGCCATAATATGTAAAAACATGTTTGAAAATT ACGTACTTGTTTGCTTGCACTTTTGCATACCGATCGTCAAGGATCATTGCTTGTTATTGACTTCACTGACTGAGGCTTATCCTGTAAAATATTGTTTTGA GAAGCTTTTAGTTCCTTTAACTTTAACTAATATTCCACCCAATTGTGAAAGTAATATAATTGTGAGAAGCAACCATTCCATAGGGATCGAGTACATCAAT TACCGATTCACTCATTTCAACACTGTCTAGACTATTCTGAATGTTAACTAGTTTGTTATCTGGCATTGTTGCTTGGTTTGTGTTTTTAGCTTATTGTTGT TTGAGCTGGTCCCTATGTTATCAAGGACTGAAATTCAAAATGAAATGCCTATGGAAAAGTAGTTTTTTTTCTTGATATTGTTTTAAAGGAATAGGTGGAG AATAATTCAAGTAATGCACCACATTTGTTTATTTAAAGTTTAAACTATTGTCATGTGTCCAGGTTTTGGTTGAATGAATTGTCTGTTAGAAAAAAAAACT TCAATTAAATTCTTGTCACCTATTTAGAACATTAAGTGGATGATAATTAAATGTCTGTTTACAGAAAGTGGCCCTGATTATTATCCCTTTTTTTACTTAA CAGCTTGAAGTAGTGGGACCTGGTGGATCACCCTATGGACATGGCGACGGCGACGAAGATCATCACCATTGATTGCATGCTTCAAATTTCCTTCCGGAAT AAGTTCAGGAAAGATAGAAACATTGTTTAGCAAACATAAGTCCTTTCAAAGCCTGTGTTTGGTTTTGATTTATAATATTTTGTGTTGTTGCAACTTTGAA GGTACAGTTTCTGTGATTATTAGACACATGTTGCTCATTTGCTTGAGGTATCAGATTCTTGTATTATGTTTTGTGCACTGTGAAATAATTGATAACCACT TGATGATTCTTTGACATTAATATATCTGTTTAAATAGAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_74444; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_79287
| Blastp | (6-4)DNA photolyase from Arabidopsis with 61.33% of identity |
|---|---|
| Blastx | (6-4)DNA photolyase from Arabidopsis with 65.42% of identity |
| Eggnog | deoxyribo-dipyrimidine photolyase(COG0415) |
| Kegg | Link to kegg annotations (AT3G15620) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019430002.1) |
| Pfam | DNA photolyase (PF00875.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |