Ll_transcript_79253

• Id Trinity: FTRINITY_DN58128_c1_g1_i4
• Name Transcript: Ll_transcript_79253
• Sequence: AACACCCTTTTTATAAACTTCCACAAACTTAGGATTCACAAGTATCAGCGCACGTTAGAACAACCCAATGACAACATCATCAACCGGGTCGGGTTGTATA TTATGGTTTCGAAAGGGTCTTCGGATCCATCACAACCCGGCTCTTCAATTCGCTTCCCAAAATGGGGTTTCTAATCTTTACCCACTTTTTGTTATCGACC CCAATTACATCAAACCCGACCCGAATTCATTCTCTCCCGGGTCGACCCGGTCGGGTCTTAACCGAATCAAGTTCTTACTTCAGAGCCTTGTGGACCTTGA TTTCAATCTTAACAAACTTGGCTCGCGTCTTCTTATTCTTAAGGGTGATCCTGTAAAGGTTCTTATTCGTTGCTTCAAAGAGTGGAATATCAGAAAGCTA TGCTTTGAGTTTGACACTGAACCATATTATCAGGCTCTGGATATTGAAGTTAAGAACTTTGCACTGGCAGAGGGAATTGAGGTTTTCTCCCCTGTAAGTC ACACACTCTTCAACCCCAAGGATATTATAGAGAAGAATGGAGGAAAGCCGCCCCTTAGTTATCAATCATTTATCAAGCTTGCCGGGGAGCCGCTACCCCC TCTCCCAACCAAGCACTCTTCACTTCCTCCAGTTGGCCATCTTGGAACTTGTGATGTTTTTGAAGTTCCATCGATCAAAGATCTTGGATATGAAGACGCT AAACAGGATGAGTTCTCTCCTTTCAAAGGCGGTGAATCAGAAGCGTTGAAGAGGTTGGCAGAGTGTATGAAAGACAAGGTGTGGGTGGCAAACTTTGAGA AACCCAATGGTAATCCATCTGCATTTCTTAAGCCAGCAACAACTGTTTTATCACCTTACTTGAAATTTGGTTGTCTCTCTTCCAGTTATTTCTACCAGCA AATTCAGGATGTATATAAAACTATGCCTAAGCATACATCACCACCTGTTTCTCTTCTAGGACAGTTGTTGTGGCGAGACTTCTTTTACACGGCAGCTTTT GGGACTCCGAACTTCGATAGAATGAAAGGCAATAGGATATGCAAGCAAATTCCGTGGAAGGATGATGATAAATTGCTGGAGGCTTGGAGGGAGGCTAGGA CAGGATTTCCTTGGATTGATGCTATCATGGTCCAGGTTTGGGTTCTAAAATCGTTTTTTCCTCCAAATGAAGCAATAACCAATAGTTGTATTACTTTGAA GCTGCATAGGTGCTCAAATCTAGTCCACCACAATATTTTCATTAGCCTTCTCAGGAAGTGCATTTGAATCTGTAATTTTCGGTTGTAGCTACGCAAGTGG GGTTGGATACATCATCTGGCACGGCACTCTGTTGCGTGCTTTCTAACTCGAGGTGATCTGTTTGTTCATTGGGAAAAAGGACGTGATGTTTTTGAGCGAC TTCTGATTGATTCAGATTGGGCCATTAACAATGGAAACTGGTTGTGGCTCTCATGTTCATCCTTCTTTTATCAGTACCATCGTATTTATTCCCCAATTAC ATTTGGCAAGAAGTATGACCCTAATGGTGACTACATTAGGCATTTTCTCCCGGTCTTAAAAGATATGCCCAAGGAGTACATTTATGAACCATGGACTGCT CCTCTAAGCATCCAGACCAAAGCAAAATGCATAATTGGCAAAGACTATCCGATGCCAGGTCAGTTTCGTAATTTAGGGCACGTCCTTTTATAGAGCTTTC AGCATTTGGTAATTTGTATCCTCCTGTGTTCTTCAATCCATATAATTGGGTTTCTTTGAGTTTGTATTTAAAGTCTGTTGTGAACTATTTTGGTTGTAAA TTGTGGTTACGAACTTACTTATGTTGTGATGCAATACCGATTGTCATTATCACGATGTGGTTTGCCGCTGTTACAGTTTGAATCTGTTGTGGCATGATGC GGTCCAATGCAATTGAATTACTATGATTCAGATCAGAATCATGTCTTAATTTGTGGGGTCATGTGTTCACTACATTGAAAGATTTGTTTTGTTTTATGTT CTAAAACTATTTGCATGTCTAAATTCAACATGTATTGGTTTGTAAGGGACTTTCTTATATATGCTCTATAAGTTGTGTTTCAGTTGTTTCCCATGATTCT GCAAGTAAAGAATGCCGACGGAAAATGCGCGAAGCATACGCGATGAACAAAGAATTGAAGGGTTTGGTTAGTGAGGATGATCTGAAGAAGTTAAGAAGAA AATTAGATGAAAGTGTAGAGCAAGGGGGAAAAGCTAAAAGATCAAGACAATAAGTGATTGTGGGTGAGAGATAAATTTGCTGGTTTTTTTCCTCATACTA CCATGCTTTATATTAGGCATTACCTTTTGTATCACACTATCTATCATGTAGTATATATTTTTTATATATATATTACTTTCGGGGTATATCATTTTCGGGG TACATGGAACCATAAACTACTAGACCAACACATTCCAGAACTCGATTATTTTATTAGAAGATAATTTAAAAAATATATATTACCATATGTGTATTGGACC GAATTGGCCTGCATGGATATATGAGATTTCAAATATGCCAAATTGTCTCAAGCAATTATTATTTGCATGTAGAAGCAATTAATTAATTAATTTGGTTAAA AAGTTATCTTTTTTTTTTAAATTACAAATTCATAGGCTGTAACCCCATCATTAGTAGATTTAAAGAATGAAATAATCTTTAAGTTTTAGATCAGTAAAAT GCTTTAAACCAAGGATTTTATATGTGTGAACTGATAGTGTAAGTGTTTTTTATACTGTTAGCAAATCATTCACCATTGATTTGTTAACCATGATTGAACG TCTAACAAAAGTAATACAAACCAAACGGTTATGAAAAACTTTACAATATTGTACAAATTTTAAATTCTTAAAACCAGTAACCATGAAGAATGATATTGTC TAGTGGTTTAGCACATTGGATTTGATTTCACTAAAACCACACACATTAAATGACATGGTTCAAGAATAAAGAATGTATTGCAAAACAAAATAGAAATGTA TTGAAAATAGTGGAAATGTTTCTTTTAACAAAATATATTTATTATTTTCTTGTCCAGCCCTAATTTTAAAGATTTGTATGAAAATAGTGAAAGTAAAAAA TAAAGTGATTTTATAAGAAGAAAAGAAAATTGATATATTTATGAAATCTATTGTTGTGTTGTATCATTGAAAAACAACAAAGAACCCTATCACTCTATCT CATTTCTGAGTTTGAAAACGACACCGTTCGCAACATCGTTGGGCGTGACCTGAGAACAATCATGTATCGTAGACTTCTCTCTTCTCACCTCAAAACCCTA ACTTCTCTCTCTCCGGCCCGATCTGCTTCCTCCGCCGCCATCGCCGCCGCCGCTCCTCCCGCACTCTCTTCCCTCTCCCGCCGCCACTTTTCCGATGACA CGAGTGCGGTAAAAAAGAAGGTTGAAGATGTTGTGCCAATCGCTACTGGTCACGAGCGTGAGGAAATTCAAGCTCAACTTGAGGGAAGGGATATTCTTGA AATAGACCACCCTGAAGGTCCTTTTGGCACAAAGGAAGAACCTGCAGTTGTCAAATCTTACTATGATAAAAGAATAGTCGGGTGCCCAGGAGGTGAAGGC GAGGATGAGCATGATGTTGTCTGGTTTTGGCTGGAGAAAGGCAAACCTCATGAATGTCCAGTGTGCTCACAGTATTTTGTGCTTGAAGTAGTGGGACCTG GTGGATCACCCTATGGACATGGCGACGGCGACGAAGATCATCACCATTGATTGCATGCTTCAAATTTCCTTCCGGAATAAGTTCAGGAAAGATAGAAACA TTGTTTAGCAAACATAAGTCCTTTCAAAGCCTGTGTTTGGTTTTGATTTATAATATTTTGTGTTGTTGCAACTTTGAAGGTACAGTTTCTGTGATTATTA GACACATGTTGCTCATTTGCTTGAGGTATCAGATTCTTGTATTATGTTTTGTGCACTGTGAAATAATTGATAACCACTTGATGATTCTTTGACATTAATA TATCTGTTTAAATAGAAAA
• Tissue: flowers
• Gene name: LI_gene_74444;
• Additional information: details;

Expression of Ll_transcript_79253

FPKM

• FPAB: 0
• FPNAB: 0.3
• LF1: 0
• LF2: 0.1
• LF3: 0
• LF4: 0
• UF1: 0.2
• UF2: 0.6
• UF3: 0.7
• UF4: 0.3

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_79253

• Blastp: (6-4)DNA photolyase from Arabidopsis with 61.33% of identity
• Blastx: (6-4)DNA photolyase from Arabidopsis with 65.42% of identity
• Eggnog: deoxyribo-dipyrimidine photolyase(COG0415)
• Kegg: Link to kegg annotations (AT3G15620)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019430002.1)
• Pfam: DNA photolyase (PF00875.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;