| Id Trinity | FTRINITY_DN58129_c1_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_78896 |
| Sequence | AGATTGTTCATTCCAATAGCTTCCAATCAATAATCAAGTTTGTGGGGGTGAGATCTCTCTCTCTCTCTCTCTCTCCTGACTTATGCTTTTTCCATTGTTT TGTTACTACGTTATTGTTGATATACAATCATGGCTATACTTGATTTAAAAGTCACTTGTTGTCTTTATTTGATTTTATGGAGATTAGTGAAACATGTGGT TTTTTGTTTTCAATGTGAACTGTTTGGTGCTTTTAGCTGACTTGTGTGTGAAAAAGTGGGTTTTGACAATTCAAAAAAAAGGAATTAAATTTGCCTTTTG TTGAATTTTTCATCTTTTGTGGCTGTTCATGGTCATATAGCTTTTGTTGTGATAAAAAAGGAACCCAAAAGTTGATTTTTTTTCATTTAAGAAGCTAATT TCTGTTTTTTTTATTTGACTCATCATTCAACCCTTGAAAAACTGTATTAAGCAGCCTGTTTAAGGTGTTTCAGTTCATACAAGGTTGTATTTGGAGTTGA ACCATAATTGATTTTTATCTTTATTTTGTTTGTTGATGTTGTTGTAGTTTGTTGTGGATCATCATCATTGTGGTGTTTGGTGTGAGGAGTTCAGGACTGT ATGCATAGTGAATGAGAAAGCTTGGGGTGAAATTGTTTAAGGGTAGTTGATAGATGTGGAATTCCTTGAGGGTAGTTTGGTGAGATGAGGGATGTTATCA CAGTTGATGAACTTTTTGAGGGCCTGCTTTCGGCCAAATTCGGTTGGTTCCACACGCACAGGTTCGGATGCTAGAGGTAGACAAGATGGACTATTGTGGT ATAAAGACTCGGGACAGCACTTTCATGGTGAATTTTCAATGGCTGTGGTTCAAGCCAATAACTTGCTGGAGGATCAGAGCCAGGTTGAATCTGGCACTTT GAGTTCCAATGAATTTGGCCCCCATGGTACCTTCATTGGTGTCTATGATGGGCACGGAGGGCCTGAAACATCGCGGTTTATCAATGATCACCTATTTCAC CATCTCAAAAGATTTACTTCAGAGCAACAATCAATGTCAACGGATGTAATTCGCAAGGCATTTCAAGCAACAGAAGACGGATTTATGTCACTCGTTGCCA GACAATGGTCAGTGAAGCCACAAATTGCAGCTGTTGGATCATGCTGTCTTGTTAGTGTTATTTGTAATGGAACTCTTTACGTAGCAAACGCTGGTGATTC TCGGGCTGTTTTAGGAAGGGTAGTCAAGGCAACTGGTGAGGTTTTAGCCACCCAATTATCAACAGAACATAATGCATCCATAGAATCCGTAAGACAGGAG CTGCATTCTTTGCACCCTGATGATCCAAATGTCGTTGTTTTAAAGCATAATGTATGGCGTGTGAAGGGCATTATTCAAATTTCTAGATCTATTGGTGATG TATATTTAAAAAAGGCTGAATTCAATAGAGAACCGCTTTACGCTAAGTTTCGAGTTCGTGAGCCGTTCAAGAGGCCAATACTTAGCTCAGAACCGTCAAT AACAGTGCATCAGTTGCAGCCACATGATCAATTTATTATATTAGCATCTGATGGGCTCTGGGAGCACCTCAGCAATCAAGAAGCAGTTGATATAGTTGCT AACAATTCCCACAATGGAAGTGCAAAGAGGCTGGTGAAAGTTGCACTTCAAGAAGCAGCAAAGAAGAGAGAAATGAGATATTCAGACTTGAAGAAAATTG ACCGCGGAGTTCGTCGACATTTCCATGATGACATCACTGTGATTGTTGTGTATCTTGACTCAAATCTCATGAGTAGGGCCAGCACTGTGAAGTTCCCTAG CATTTCTGTTAGAGGGGGCGGTATTCACTTGCCTTCTAACACACTAGCACCTTGTACAATGCCAACAGAGATCGGCGGTACCTGATCGAACTTCTTATCG TTTTCTTCGTTGAATCGATTTCTTGTGTGAGTATAGTTATGTTCAAATAGCAATGAGTGGAGCAGCCCTTCAATTCTTTGAATGTGAACTATAAACTTCT TAGGATACTAATACACTCATGTTTAGGTTTTCTCCACTCATATGACCATTATAAGAGTTGCCTCAGGCACCATTTACCTTTTACCATCATTTCCCCTTCT ATTTTGGTAACTTCTGTTTTACAAATTGTGATTTGGTATTGTAAGCAATCATCTATGTTTTATTTGCATGTAACAACTAATGTCTTGATGTGGAAGTTCT TCTTAGTTGTAGATAATTCCGAGCGACAAGGATCTGTTGTCCCAAGCCAATAACGACTTGTCACACCAATTAAAAAAAAGTAAACATTCATCATTTTATT TATTTTTTCTACATTATGATTTGTTTGGTACATAGTTGGCGACAGAATTCGGGACAGCAGATCCCCATCCATATATATCTGCCTATATTCTGGGTCACTA TTTATATTTTTCGGTACTAACAAGGTTATTTCCTTTTGGGATACATGTTGTCTTTTCTAACAAGTATTTCTTATACAAATCGAACTTTCGACTTTTTGGC TATCCTGATAACACTATTTATATATGTTGCCTTAAAATGTTGTGATTTACAAAAAGGATATAATTTGTTAAGTGGTTAATTTTCTTTTATAAATGGTCAT GTTAACATTAATTTTTTTAGGATGAATCATGCATATATATGGTTGATTGTTTAAGTTTTACTCCACTTGTTAATATATCTAAATATAGATTATAAATATA AATGACAATTATGTAAGTATATTGTAGAATGTTCCACCACAGTTATGACCAAATCAAAGTGTACAAATATTGGTGTATGGATCTGACTCATTGAATGTCA TGTCTCACAGTACCATCATTAGAAATTAATATTATAATATCAGTTATAAAAGGTTAGATGCACCATTACCATGTATGTTTATTTTGAGTAATAAAAAGTA AGTAATACATTATTGAGTACCTTATTTGTTTTTTTATCTATTATCAATATTATTACATGCAGGAGCACCATGTTAATATGAATATTTGTCAATGATATGA GTGAGTTTGATAATAATATTATTATTCACTGACTGTAATGTTATAGGTTAAAAATCCTGAAAATAATCTCTTCACTTATGAGATAAGATTACATACTTTT ATCTTCCT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_74450; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_78896
| Blastp | Probable protein phosphatase 2C 64 from Arabidopsis with 76.08% of identity |
|---|---|
| Blastx | Probable protein phosphatase 2C 64 from Arabidopsis with 76.08% of identity |
| Eggnog | Phosphatase(COG0631) |
| Kegg | Link to kegg annotations (AT4G38520) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019452609.1) |
| Pfam | Protein phosphatase 2C (PF00481.20) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |