| Id Trinity | FTRINITY_DN58143_c0_g1_i19 |
|---|---|
| Name Transcript | Ll_transcript_78615 |
| Sequence | GCCATTGCAGGAGATGGATGATCCTTTGTCATCCACTGTACCCAGTTCCTTAACAGAAGAAAAACCGGTAACCACTGGTGATGAGAAATCTGACCAGTGC AATCTTCCACCACCAAAGTTGGAATTACCCCCTTCTTCCCCAAATTTGAATTTAGATGGTCTTCCTGTTCTTGAACTTTTTTCTATTTACACTTTTTTAA GATCTTTCAGTACTACATTATTTTTGAGTCCATTTGAGTTGGAGGATCTTGTTGCCGCACTGAAGTCTGAAACCCCCACTATATTATTTGACAACATCCA TGCTTCTATCTTGCAAACTTTGAGAAAGCATTTAGAATACCTTTCCAATGAGGGTTGCCAATCCGCGTCCGATTGCCTGAGGAATCTTAACTGGGATTTC TTGGACCTGATCACATGGCCCATTTTCATGGCCGAGTACCTTCTGATTCATGGCTCAGGATTTAAAACTGCTTATGATCTTAACCACTCAATGTTTAGAA CTGACTACTGCAAGCAGCCTGTAAATGTGAAGGTTAAGATTCTTCAGTACCTTTGTGATGAAATGATTGAAGTGGAAGCCTTAAGGTCAGAGCTTAACAG AAGATCTTTGGCAACTGAGACTGATGTGGTCTTCAATCAGAATATGTATTTTGACACTTGTAAGAAAAGAAGAGGTGTAGTGGATATGTCTCGTGGCTCT TGCTCGACTGAGGAGATTGTGGATGACACAACTGACTGGAACAGTGACGAGTGCTGCCTCTGTAAGATGGATGGGAGTTTAATATGCTGTGATGGCTGCC CTGCTGCGTTTCACTCAAGGTGTGTGGGAATTGCAAGTGACAGTCTGCCCGAAGGTGACTGGTATTGCCCTGAATGTGCAATTGGGCCACACGGGGCTTG GATGAAATCGCGAAGGTCACTTCGAGGAGCAGACTTGTTAGGGATTGATCTCCATGCCCGTCTTTATTTTAACAGCTTTGGTTACCTATTAGTGTCAGAC TCATCTGACTCAGGCTCCTTGTTCAATTACTACCACAAAAATGATATACATGTAGTAATTGAAGTTCTAAAGTCTATGGGCACTTTGTATGGAAGCATAT TAATGGCTATTTATGAGCATTGGGATATCCCTGCCAACTTAAGTGCGAGGACTAGTAACTTGGTAGTCTTTAATCAAAGTTCCTGCAAAAATGTGCAAAT AAGCGGAAATTTGAACAATAATCGGTCTGATGATGAAAGAAAGTTTGATGAAAATCAAACTGTTGACTGTTCTACTCATCCTGGCCAAGAATTTCCAAAA GCTGGGACCCACTTAGATTCAATGAAAACTAAAGAATGTCCTTTTGTTCCTTTAGAAGGGTTAGCTGATACCACACAAATGAGATCAGGGATTGAGAATG TTCGAATCTCTGGGCTTTATGACTCCAATAGATCTGATGTATCCTTGAATCAGTCGGGAATACTAGAAAAACATCATCCAGTTGGTGATTGTTCGTTGAC ATCTGCCAGCTTAGATGTGGGACATAACATAAACTTTAGATCTGTGGGTGCTAGCTGTACCCCCTCCACTGCCAATAAGGATACCTCAGTAGTGCCTTGT GAAGTTGACTTCATAAACTACTATAGCTTTGCCCGAACAGCCGCATTAGTTGCAGAAGAGTTGATATGCAAGTCACCTGAGAAGATCAATGTAATGTCTG AAGAGGACATAATTTCAGATCAAGCAAAGGCCATCATGAAGAAATCTTCAAACTTTTGTTGGCCAAGTATTGAAAACCTGAATGCAGCTGCTGAAAAGGA AAAATGTGGGTGGTGCTTTTCTTGCAAAGTTGCTAATGATGACCGGGGTTGCTTGTTTAATGATGTGATGAAGTCTGTTTTGGACGTGCCTAATAATACT TTAGTCGGACTTGAATCCAGGAAGATCCATAATTTACATCTTAGAGCTATCATATGTCATATTGTTTCCCTTGAGGACCGATTACGTGGGCTTTTGTTGG GTCCATGGTTGGATCCACATCAAACCAATCTTTGGCATCAGGAACTTCTGAAGACATCCGATTTTTTTCCTGTTAAACAATTGTTGCTCCTATTAGAATC CAATCTGCGGCATTTTGCACTCTCGGCAGATTGGTTGAAGCATACAGATTCCGTGACTACTATGGGATCATGTACTCATATTGTGGTCAATTCATCACGC ACATCTTCAAGGCATGGTATTGCAAGGAAAAGGGCCAAAAATTCAGATATTGAGTCCAATTCATCTTCAAAGACTACTAGTGGTTTGGGAATATATTGGT GGAGAGGTGGGAGGCTTTCTCGACAATTGTTTAATTGGAAGTCTTTGCCTCGCTCCTTGGTTACCAAGGCTGCTAGACAAGCTGGGTGTACAAAGATACC AGGTATTCTATATCCTGAGAATTCAGATTTTGCAAGGAGAAGCAAATATGTAGCCTGGCGAGCTGCTGTTGAGATGTCAACAAGTGTTGAGCATCTTGCT TTACAGGTTAGAGAGCTTCATTCAAACATAAAGTGGCATGATATCGAGAATAGCCATCCTCAATATGTGTTGGACAAGGAATCTAGAAAGTCAATCAGGC TGTTCAAAAAAGTAATTGTACGCAGGAAGTGCAGTGAAGGGGAATCTGTGAAATACCTTCTTGATTTTGGGGGGAAGAGAAGGGCCATTCCAGATATCGT TGTCAAACATGGTTCTTTGTTGGAAGAACCTTCAAGTGAGAGGAAAAAATATTGGCTGGATGAATCTTATCTTCCCTTGCATCTCTTGAAGAATTTTGAG GAAAAAAGAATTGTCCGAAAGTCCACTGGAAAGAAACATGAGAAAGTTATTGAGATTGGTAGAGTAAATAAGAGGATTCCTCGGGAAAAGGTTTTCTCGT ATTTGTTTTCTAAAATGGAAAGATCTGATTGTCAACAGTGTGGCCACTGCAACAAAGACGTTCCAATCAGGGAAGCTGTGAGCTGCCTTCATTGCAAAGG ATATTTCCATAAGAGGCATGTCAGGAGATCCCGTGGTACGAGCACCACTGGATATACATATTCATGCCACAGATGCCAAGATGGGATGCATGTAAAGGCT AATAATACCAGCAGAAGGAGAGTTGACTCAAAACTGCAGAAGATTCAATCACAGAACTGTAAAAGTCTTCCATCACTTTGTAAATCAGTGAACCTTAACG GCAATAAAAAGGCATTGAGTAAGGCGCGGCAGTTAAGATCTCAAACCAATAAGAAGATCCCACCAAGTGTACCTCTTCGTCGTTCTGCTAGGAAGGTCAA ATCCTTGTATCTGCACCGTCAAATGAATAGAGGTCATAAAAAAGGAATACAAAGTAAAAAGAATGTAGGACGTAAAAAAGGGACGCAAAACAAATCCAAG AAGCTGACTTCTCAGAAGTCCAAGGCAATTACAGCTCAATGGAGAAAAAGCATGTTGTCTCTTCTGAAGATTTTCCAGGCAGCAATGATCATCGTAAATG CTGCCTTTGTTGTCAAGATGGATGCACTTCAAATTATATTGCTTGTGAAACTTGTGGAGATTGGTTTCATGGGGATGCTTTTGGGCTTACCCTTGACAAT GCCAGACAAATTATTGGATTTAGGTGCCATGTGTGTCGTGATAGGGCTGCTCCGGTCTGCCCCCATATGAAGATTAATGCGCTGCCTCATGCTGAAAGCA ACATGTCAACTGAGTGTGCAGAGGAATTGTCTAATCCTGTTTCTCTCCAACCTTTGAGTGTG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_74579; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_78615
| Blastp | DDT domain-containing protein PTM from Arabidopsis with 29.78% of identity |
|---|---|
| Blastx | DDT domain-containing protein PTM from Arabidopsis with 36.36% of identity |
| Eggnog | Membrane-associated zinc metalloprotease(COG0750) |
| Kegg | Link to kegg annotations (AT5G35210) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019450901.1) |
| Pfam | WSTF, HB1, Itc1p, MBD9 motif 1 (PF15612.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |