Ll_transcript_78597

• Id Trinity: FTRINITY_DN58143_c0_g1_i3
• Name Transcript: Ll_transcript_78597
• Sequence: GCCATTGCAGGAGATGGATGATCCTTTGTCATCCACTGTACCCAGTTCCTTAACAGAAGAAAAACCGGTAACCACTGGTGATGAGAAATCTGACCAGTGC AATCTTCCACCACCAAAGTTGGAATTACCCCCTTCTTCCCCAAATTTGAATTTAGATGGTCTTCCTGTTCTTGAACTTTTTTCTATTTACACTTTTTTAA GATCTTTCAGTACTACATTATTTTTGAGTCCATTTGAGTTGGAGGATCTTGTTGCCGCACTGAAGTCTGAAACCCCCACTATATTATTTGACAACATCCA TGCTTCTATCTTGCAAACTTTGAGAAAGCATTTAGAATACCTTTCCAATGAGGGTTGCCAATCCGCGTCCGATTGCCTGAGGAATCTTAACTGGGATTTC TTGGACCTGATCACATGGCCCATTTTCATGGCCGAGTACCTTCTGATTCATGGCTCAGGATTTAAAACTGCTTATGATCTTAACCACTCAATGTTTAGAA CTGACTACTGCAAGCAGCCTGTAAATGTGAAGGTTAAGATTCTTCAGTACCTTTGTGATGAAATGATTGAAGTGGAAGCCTTAAGGTCAGAGCTTAACAG AAGATCTTTGGCAACTGAGACTGATGTGGTCTTCAATCAGAATATGTATTTTGACACTTGTAAGAAAAGAAGAGGTGTAGTGGATATGTCTCGTGGCTCT TGCTCGACTGAGGAGATTGTGGATGACACAACTGACTGGAACAGTGACGAGTGCTGCCTCTGTAAGATGGATGGGAGTTTAATATGCTGTGATGGCTGCC CTGCTGCGTTTCACTCAAGGTGTGTGGGAATTGCAAGTGACAGTCTGCCCGAAGGTGACTGGTATTGCCCTGAATGTGCAATTGGGCCACACGGGGCTTG GATGAAATCGCGAAGGTCACTTCGAGGAGCAGACTTGTTAGGGATTGATCTCCATGCCCGTCTTTATTTTAACAGCTTTGGTTACCTATTAGTGTCAGAC TCATCTGACTCAGGCTCCTTGTTCAATTACTACCACAAAAATGATATACATGTAGTAATTGAAGTTCTAAAGTCTATGGGCACTTTGTATGGAAGCATAT TAATGGCTATTTATGAGCATTGGGATATCCCTGCCAACTTAAGTGCGAGGACTAGTAACTTGGTAGTCTTTAATCAAAGTTCCTGCAAAAATGTGCAAAT AAGCGGAAATTTGAACAATAATCGGTCTGATGATGAAAGAAAGTTTGATGAAAATCAAACTGTTGACTGTTCTACTCATCCTGGCCAAGAATTTCCAAAA GCTGGGACCCACTTAGATTCAATGAAAACTAAAGAATGTCCTTTTGTTCCTTTAGAAGGGTTAGCTGATACCACACAAATGAGATCAGGGATTGAGAATG TTCGAATCTCTGGGCTTTATGACTCCAATAGATCTGATGTATCCTTGAATCAGTCGGGAATACTAGAAAAACATCATCCAGTTGGTGATTGTTCGTTGAC ATCTGCCAGCTTAGATGTGGGACATAACATAAACTTTAGATCTGTGGGTGCTAGCTGTACCCCCTCCACTGCCAATAAGGATACCTCAGTAGTGCCTTGT GAAGTTGACTTCATAAACTACTATAGCTTTGCCCGAACAGCCGCATTAGTTGCAGAAGAGTTGATATGCAAGTCACCTGAGAAGATCAATGTAATGTCTG AAGAGGACATAATTTCAGATCAAGCAAAGGCCATCATGAAGAAATCTTCAAACTTTTGTTGGCCAAGTATTGAAAACCTGAATGCAGCTGCTGAAAAGGA AAAATGTGGGTGGTGCTTTTCTTGCAAAGTTGCTAATGATGACCGGGGTTGCTTGTTTAATGATGTGATGAAGTCTGTTTTGGACGTGCCTAATAATACT TTAGTCGGACTTGAATCCAGGAAGATCCATAATTTACATCTTAGAGCTATCATATGTCATATTGTTTCCCTTGAGGACCGATTACGTGGGCTTTTGTTGG GTCCATGGTTGGATCCACATCAAACCAATCTTTGGCATCAGGAACTTCTGAAGACATCCGATTTTTTTCCTGTTAAACAATTGTTGCTCCTATTAGAATC CAATCTGCGGCATTTTGCACTCTCGGCAGATTGGTTGAAGCATACAGATTCCGTGACTACTATGGGATCATGTACTCATATTGTGGTCAATTCATCACGC ACATCTTCAAGGCATGGTATTGCAAGGAAAAGGGCCAAAAATTCAGATATTGAGTCCAATTCATCTTCAAAGACTACTAGTGGTTTGGGAATATATTGGT GGAGAGGTGGGAGGCTTTCTCGACAATTGTTTAATTGGAAGTCTTTGCCTCGCTCCTTGGTTACCAAGGCTGCTAGACAAGCTGGGTGTACAAAGATACC AGGTATTCTATATCCTGAGAATTCAGATTTTGCAAGGAGAAGCAAATATGTAGCCTGGCGAGCTGCTGTTGAGATGTCAACAAGTGTTGAGCATCTTGCT TTACAGGTTAGAGAGCTTCATTCAAACATAAAGTGGCATGATATCGAGAATAGCCATCCTCAATATGTGTTGGACAAGGAATCTAGAAAGTCAATCAGGC TGTTCAAAAAAGTAATTGTACGCAGGAAGTGCAGTGAAGGGGAATCTGTGAAATACCTTCTTGATTTTGGGGGGAAGAGAAGGGCCATTCCAGATATCGT TGTCAAACATGGTTCTTTGTTGGAAGAACCTTCAAGTGAGAGGAAAAAATATTGGCTGGATGAATCTTATCTTCCCTTGCATCTCTTGAAGAATTTTGAG GAAAAAAGAATTGTCCGAAAGTCCACTGGAAAGAAACATGAGAAAGTTATTGAGATTGGTAGAGTAAATAAGAGGATTCCTCGGGAAAAGGTTTTCTCGT ATTTGTTTTCTAAAATGGAAAGATCTGATTGTCAACAGTGTGGCCACTGCAACAAAGACGTTCCAATCAGGGAAGCTGTGAGCTGCCTTCATTGCAAAGG ATATTTCCATAAGAGGCATGTCAGGAGATCCCGTGGTACGAGCACCACTGGATATACATATTCATGCCACAGATGCCAAGATGGGATGCATGTAAAGGCT AATAATACCAGCAGAAGGAGAGTTGACTCAAAACTGCAGAAGATTCAATCACAGAACTGTAAAAGTCTTCCATCACTTTGTAAATCAGTGAACCTTAACG GCAATAAAAAGGCATTGAGTAAGGCGCGGCAGTTAAGATCTCAAACCAATAAGAAGATCCCACCAAGTGTACCTCTTCGTCGTTCTGCTAGGAAGGTCAA ATCCTTGTATCTGCACCGTCAAATGAATAGAGGTCATAAAAAAGGAATACAAAGTAAAAAGAATGTAGGACGTAAAAAAGGGACGCAAAACAAATCCAAG AAGCTGACTTCTCAGAAGTCCAAGGCAATTACAGCTCAATGTAAGACATTGGCAGTGACTACTGTTTGTAAGAAAAGAACAAATGTCTATAGTAGTTACT GGCTTAATGGTATTAGGTTCTCTACAAAGCCAAATGATGAACGAGTAATGTTGTTTAGGGAGAAAAAGCATGTTGTCTCTTCTGAAGATTTTCCAGGCAG CAATGATCATCGTAAATGCTGCCTTTGTTGTCAAGATGGATGCACTTCAAATTATATTGCTTGTGAAACTTGTGGAGATTGGTTTCATGGGGATGCTTTT GGGCTTACCCTTGACAATGCCAGACAAATTATTGGATTTAGGTGCCATGTGTGTCGTGATAGGGCTGCTCCGGTCTGCCCCCATATGAAGATTAATGCGC TGCCTCATGCTGAAAGCAACATGTCAACTGAGTGTGCAGAGGAATTGTCTAATCCTGTTTCTCTCCAACCTTTGAGTGTG
• Tissue: flowers
• Gene name: LI_gene_74579;
• Additional information: details;

Expression of Ll_transcript_78597

FPKM

• FPAB: 7.1
• FPNAB: 3.3
• LF1: 3
• LF2: 3
• LF3: 3.3
• LF4: 2.8
• UF1: 2.2
• UF2: 3.7
• UF3: 3.4
• UF4: 1.9

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_78597

• Blastp: DDT domain-containing protein PTM from Arabidopsis with 27.4% of identity
• Blastx: DDT domain-containing protein PTM from Arabidopsis with 34.84% of identity
• Eggnog: Membrane-associated zinc metalloprotease(COG0750)
• Kegg: Link to kegg annotations (AT5G35210)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019450901.1)
• Pfam: WSTF, HB1, Itc1p, MBD9 motif 1 (PF15612.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;