Id Trinity | FTRINITY_DN58148_c0_g1_i4 |
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Name Transcript | Ll_transcript_79595 |
Sequence | ATGAAAACCATTGCTCTCTCTTTCTCACTGTTTCTCAACTTTGAAGCCTAATCACGCATAGTGTTTTGCAATTTCAGGTTCCTCAACTCACTTATACCTT TAATTCTCGCTATGCATTTCGCTACTTTGATTAATTCGTGACCCTTAAGAGTTCTCAATTGCTCCAAAATCAAAATTTCAACAAATTTAGGGTTTTGAAA ACTTCAATTCACACCTCTGCTGCACATGGTTGAGTAGAATTAGCTTGCTGCCCCAACTCGCATTGTTGTTTTCAATCTTCAGATTTTATTTTTTAATTAC TTTGTTGATGTAATGGGTAATGTTGAAATCCCCAATTGGCTTGAAGGATTGCCTCTGGCACCAGAATTTCACCCCACCGACACTGAATTTGCCGACCCAA TTGCTTATATTTCAAAGATTGAGAAGGAAGCTAGCACCTTTGGGATATGCAAGATTATTCCACCATTGCCCAAACCTTCAAAAAAATATGTTTTTTCTAA TTTGAATAGGTCCCTCTTGAAATGCCCTGATTTGAGTCAAGATAATAGTTCCTTAGGCATTTGTAATTCTCTGAGTATGGTCCCAGCGGATAGTTGTAGT CATAGGGCGTCTCGTGCTGTGTTTACTACTAGGCAGCAAGAACTAGGGCAGAGTGTGAAAAAGGCCAAAGGGGCAGGTCAGAACCCACTATCATGTGTGC AAAAGCAAGTGTGGCAAAGTGGGGAAGTTTATACGCTTGAACAGTTTGAGTCTAAATCAAAGACCTTCGCAAGAAGCGTGCTGGGGACGGTGAAGGATGT TTCTCCACTGCATATAGATGCTATGTTTTGGAAGGCAGCTTCAGAGAAGCCTATGTATATTGAGTATGCCAATGATGTGCCTGGCTCTGCTTTTGGAGAA TCCAAGGATGAATTTTGTTACAGTCCTAGGAAGCGAAGAAGGATGCCTTATAACAGCAGAATAGATAGCCATGTTTGTAAACAAACTGAAATGAATAGCA TTGTAAGAGATGCCAAAAGTAATGAGACTAAGGTTGCCTCTTCCCAGAGTTGTGCAGACACTTGTTTAAAGACGTCCGAAGCAGCTATGCCTGTGTCAAC ATTTCCATTGAATGAAGCTTCACAATCTTCTGGGGGAAAAATTTCAGAAGCCAGCAATGATATGCAAGGCCATTCTGGTTGGAAGCTTTCAAATAGTCCC TGGAACTTACAGGTTATTGCACGCTCACCTGGCTCGCTAACACGCTTTATGCCAGATGATATCCCTGGAGTTACTTCCCCCATGGTGTACATTGGTATGC TGTTCAGTTGGTTTGCCTGGCATGTAGAGGATCATGAGCTTCATAGCATGAATTTTCTTCACACTGGATCATCGAAGAGTTGGTATTCTGTTCCCGGAGA TTATGCATTTGCTTTTGAGGAAGTCATCCGCTGTCAGGCTTATGGCGATAACGTTGATCACTTAGCTGCTTTGAAACTTTTGGGGGAGAAAACAACTCTT TTATCACCTGAGGTAGTTATTGAATCTGGGATTCCTTGTTGCAGGTTAATACAGAACCCTGGTGAATTTGTTGTGACTTTTCCAAGAGCTTATCATGTAG GATTCAGCCACGGTTTTAACTGTGGGGAAGCTGCCAACTTTGGAACCCCACAATGGCTTACAGTAGCTAAGGAAGCCGCAGTGCGTAGAGCTGTGATGAA TTATCTTCCCATGCTCTCCCATCAGCAATTGCTTTACTTGCTGACCATGTCTTTTATTTCAAGAGTGCCAAGAACACTATTACCTGGTGTGTGTAGTTCA CGTCTAAGAGGTCGGCAAAAAGAAGAAAGAGAGTTGTTAGTAAAAAAAGCTTTTATAGAAGATATGTTGCAGGAAAACAAGCTGATATCCATCCTTCTTG GAAAGGAATCAACCAAACAAGCTGTTTTATGGAATGCTGATTTACTACCAAATTTCAGTAAAGATGGTTGGTTCTCTGATATAGCGTCTACTAGTGGAAT TTCTGCAGCCAACATGTCAAATATTAGTTCTTCAGATAAAAGCAGCCATCATCTGTTTGACGAGATGAGTTCGTATATGGACAATCTGAGTGATTTACAT CTTGGGGATGATGATTTTTCACATGACTTCCAAACTGATTCAGGACCCTTGGCTTGTGTGGGTTGTGGACTCCTTGGTTTTCCATTTATGACTGTGGTGC AACCATCTGAGAAATTGATAATGGAACTTTTTCCTGTTAATCATCATCTAGTTCAAGATTCCTCTCTGAACTCTACTGCCTCCCTTCATAGCTCCACTTC AAGTATTGTCTTTATATTTTGCCCTTTCATTTGATTTTATTCTTCATTGCATTTTCATATGCAGGATTTCATTTATGCTTTGTTGCATTTTGTGGTGTGT GGTAAAATTGTACTTGTCAGCACATGGATATGTAGGAGGTAGGAGGCGGAATACTTGTAATTTCTAGGGCTATTATGATACAGTTCTCGAAATTCAAATA TTTCAAGTGCTTAGATCAAATGCAATATTAGCATTATTGAGGAAGCTAATTCGTTGTCAGTCTTTTACAATTTGCTGAAAGCCTAATTTGTGTCCTCCCT GATCTGATTTTTAGTAATATTCGATTTGTAATGTGGTTATAGTTGATATATTTAATTGATTCCTACATGTAGTCATTAACCAAAATATCAATACTTCACC AAAATGTTATTTCTTATATGCAGCTACTATATTTATTCTTTCTAATAATTATATCCAATATGTATAGTTCTGACTTGCACTTCCTTCTGTATATTTATGA TATCATGGAAGCTGACATGCTGACCAAAACTTTCCAAAAAGAAACATATTTGATGAAAATGCTTGCTGAAACTATACAAGCATATGCCTTTTCTGAAGTG CTAAAATGAGTTACTATATAATCTGTTCTTCAGATCTTTGTGTTTCTGAACTTTCTTCAGCAAAGGAACCATCTAATCAATCATTGAAGACATTCAATAA ATGTTGGAATGCCTCCAGTAAATTTTTGAGGCCACGGATTTTCTGCCTGGAGCATGCTGTTCAGATAGTGGACATGTTGCAGTCCAAAGGTGGAGCCAAT GTGCTAATAATTTGCCATTCCGGTATGTTTGCAGACTACAAATTTGTTTGCATTTTCTTTCAGTTAAAGTTGGGTAAAGTCAAATAACAAATTGCTGGAG ACGTACCACTTTCTGTCTCAACCTTTCAACTTAAATTTAGTAATGAAAGCCGGTGGTTCTTTATTTCAGATGAAATCCATCTACACAAGGCAGCTGTTGA TCAATATATAATTTGTCTTATAATCCAGTTTACATGAATTTGTGATCAGTTACAGACATGGAAGTTGTATGTTATAACTCAAGAAAATATGAGGAGCAAA TACCTCTATTTCAAAATTTTCACATGCTTTTGCATCTCACTTTCACATTTTTTTGCATTCTTGCAGACTACCAGAAAATGAAGGCACATGCCAGTGCAGT TGCAGAAGAGATACACAGTGCTTTTGATTATAATGAGGTTCCATTAGATATTGCATCCCCAGAAAATTTGACTCTGATTGATTTGGCAATTGGTGAACAA CATGATGAATGTGAAGACTGGACATCCAAACTTGGCATTAACCTTCGGTATTGTGTCAATGCAAGAAATAACTCTCCATCTAAACAAGTTCTCTGGACAC TAGCGTTAGGGATGCTGTTCTCCGATAAACATCCTGGTTTAGACTGTTTATCATTAAGTTGGCAGTCACGGAGATCTCGGTCAAAAAGGTTAAATCATTC AGCTCAGACTAAAACCTGTGACATAATTCAGAGAAAGAAGGATGATCAGTTGGAGGGAAGAAAAGATGGCTCCACTGCTAAAAAGAAGCTAATTCAGTAT TCAAGAAGAAAGATCAAATCAAAGCAAAGTTGTTCCTCAGGACCGAGCATGGTCAATAAATTCCAAGAGAAGTCCACAAACATGGCAGCTGTTTTGAGTG AGGAGCACTATAAATGTGTTTCTAAAAGTGATCTTGACACTAGGAACTTCAGGAGTGAATGTGCATTGTCAGGTGTGTCTACTTCTACTGCACTGTCTCC GGCGCATCATGAAATGTCTACAAAGAATCAAATTACAGAAGCATTTGTCATCGACAGTAATGGTAATAGGCCATGCTTAGATGATGAAATACATAAAGAA TATCAGTCTACCTGCAAAAGCAACAATGAGGAAGCTGCTTTATCTACTGTTTCATTGGCAAATCAACCTATACTTGCTTCTATGGGTGAAAGTTTTGAAA GTCCAAATAACAATTATGCTGCTGAAAAAATTAGCAATGTTATGTCCTTAAATGAGACAAGTGGGCAAGAAATTAATTCTTTGAGTGAAAGGGGCGAGGA ACTTCTAAGTGATAATAATAAATCAACAAGTGAATATGCGCCAAACGGAGAAGTTTGTGAAATTCCAAGAGAGCTTTATGCTGCTTCAGACTTGAATGAT ACTGTCATCTTGGATGCTGAGAAGCAGTGCCAAGTCCAAATTAACAGCAAGCTTAATGAGGAGTCTGTTTCTAGTTATGTTGCAAAAGGTGGAAATAGAA GTGTAACTTTGTCAGAATTAGGATGTTCTGAAGTTACAATGGAAACATGTCCTCAAGAAAACTCGTGTATTAAATTTATTTCAGATAAAGGAAAGGAACC GGAAATCCAACCAACTAGTAGAAGTGATGAGGAAATTTGCTCTGGTACTGAGACACTATTAGAGGACTCTTCCGTTTCAATCCAGGAATGTTCTAATGTA AATGGAAGCGAAGTTCATTTATTACAAGATAATACGGAACCAGAAAGCTCTAAGTTGACTACAGAAGCTACCCAATCAAGCGCTCAGAAGAAAAGAAAGA GGGAAGTGGAACAGCTAACAAAGAACCAATCTGATTGCAGTAACTTTATAAGAAGTCCATGTGAAGGGCTGAGGTCAAGAGCTGGCAAAATCACTGCAGA TAAAAGAAGGGGGGAGAGCAGCCAAAATGACAAGGAACATCAGGATGGTAGAAGGGCACAGAGAGTTCCGGTTCCTCACAAGAATAAAAATGATGATGTC AAAAGGCCACATAGTTGTGACCTTGATGGTTGTGGTATGACTTTCTCGACAAAGGCCGACTTACAGTTGCACAAACGTAACATTTGCCCACATAAAGCAT GTCGTAAGAAGTTCAGCTCCCACAAATATACCCTGCTTCACCAGCGTGTTCATGACGATGAAAGGCCCCTCAAGTGCCCATGGAAAGGTTGTTCCATGAC ATTCAAATGGGCATGGGCAAGGAAAGAGCACATACGTGTGCATACCGGGGAGAAGCCTTATCAATGCAAGGTTAAGGGATGTGGCCTTTCCTTCAGGTTT GTATCCGATTTTAGCCGGCACAGGCGAAAAACAGGACATTATGTGCAGTCTTCATCTTGAGATATAAAATTCATTTTGTACTTTATCCTTTTCTAATTGT GCACATATGCAATTAAGGTCTTAAGAAGTGAAGCACAGAGTCATGTCTGACCTGAAGCATTGTGGTTAGTTGTAAACTTAGGATATGAATCCATATCCAT TTTATGTTTAAGGCAATAGAGTTGGTACTGGTAACTTGTCATAGTTTTGATCTTTTGGGATTAATAGACAGAAGATTTAGCAGCTGCCTCTACAGGATGG AAAACTCTCCAGTAAAGGGTGCTACATTATCATGTTGGTTGTTCATATCTCTGCATGATTAACTGTACCTGTGGTTCTTTTGAAGCACAGTTAATATGTG CTTGATCTTTCTGTATAGTTTGTTCATTGTGGTTGTTAATTTAATGGTTTGGATTAACAACCCATTTGTTTTAGAGTACAAGAAAGCTGACAGTTGAGTT GACAAAAGATGCTTTAGGGTACAATACAATTATATAGTGGGTACAATACAATTTTCTCTACACGAATAATAAATAAAAGATGCTTTAGGGTGAATAGTTG CATTGATTTACTAGGGAGTATTAAATGATACAACACATTACTTGATTTGCCTATATTTGTAAAACTTTAATTTCTGTGAGTGAAATAAAAAAACAAACCT ATCG BLAST |
Tissue | flowers |
Gene name | LI_gene_74615; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_79595
Blastp | Probable lysine-specific demethylase ELF6 from Arabidopsis with 35.29% of identity |
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Blastx | Probable lysine-specific demethylase ELF6 from Arabidopsis with 61.13% of identity |
Eggnog | Zinc finger protein(COG5048) |
Kegg | Link to kegg annotations (AT5G04240) |
CantataDB | Link to cantataDB annotations (CNT0000082) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019428052.1) |
Pfam | Zinc finger, C2H2 type (PF00096.25) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |