Ll_transcript_79596

• Id Trinity: FTRINITY_DN58148_c0_g1_i5
• Name Transcript: Ll_transcript_79596
• Sequence: ATGAAAACCATTGCTCTCTCTTTCTCACTGTTTCTCAACTTTGAAGCCTAATCACGCATAGTGTTTTGCAATTTCAGGTTCCTCAACTCACTTATACCTT TAATTCTCGCTATGCATTTCGCTACTTTGATTAATTCGTGACCCTTAAGAGTTCTCAATTGCTCCAAAATCAAAATTTCAACAAATTTAGGGTTTTGAAA ACTTCAATTCACACCTCTGCTGCACATGGTTGAGTAGAATTAGCTTGCTGCCCCAACTCGCATTGTTGTTTTCAATCTTCAGATTTTATTTTTTAATTAC TTTGTTGATGTAATGGGTAATGTTGAAATCCCCAATTGGCTTGAAGGATTGCCTCTGGCACCAGAATTTCACCCCACCGACACTGAATTTGCCGACCCAA TTGCTTATATTTCAAAGATTGAGAAGGAAGCTAGCACCTTTGGGATATGCAAGATTATTCCACCATTGCCCAAACCTTCAAAAAAATATGTTTTTTCTAA TTTGAATAGGTCCCTCTTGAAATGCCCTGATTTGAGTCAAGATAATAGTTCCTTAGGCATTTGTAATTCTCTGAGTATGGTCCCAGCGGATAGTTGTAGT CATAGGGCGTCTCGTGCTGTGTTTACTACTAGGCAGCAAGAACTAGGGCAGAGTGTGAAAAAGGCCAAAGGGGCAGGTCAGAACCCACTATCATGTGTGC AAAAGCAAGTGTGGCAAAGTGGGGAAGTTTATACGCTTGAACAGTTTGAGTCTAAATCAAAGACCTTCGCAAGAAGCGTGCTGGGGACGGTGAAGGATGT TTCTCCACTGCATATAGATGCTATGTTTTGGAAGGCAGCTTCAGAGAAGCCTATGTATATTGAGTATGCCAATGATGTGCCTGGCTCTGCTTTTGGAGAA TCCAAGGATGAATTTTGTTACAGTCCTAGGAAGCGAAGAAGGATGCCTTATAACAGCAGAATAGATAGCCATGTTTGTAAACAAACTGAAATGAATAGCA TTGTAAGAGATGCCAAAAGTAATGAGACTAAGGTTGCCTCTTCCCAGAGTTGTGCAGACACTTGTTTAAAGACGTCCGAAGCAGCTATGCCTGTGTCAAC ATTTCCATTGAATGAAGCTTCACAATCTTCTGGGGGAAAAATTTCAGAAGCCAGCAATGATATGCAAGGCCATTCTGGTTGGAAGCTTTCAAATAGTCCC TGGAACTTACAGGTTATTGCACGCTCACCTGGCTCGCTAACACGCTTTATGCCAGATGATATCCCTGGAGTTACTTCCCCCATGGTGTACATTGGTATGC TGTTCAGTTGGTTTGCCTGGCATGTAGAGGATCATGAGCTTCATAGCATGAATTTTCTTCACACTGGATCATCGAAGAGTTGGTATTCTGTTCCCGGAGA TTATGCATTTGCTTTTGAGGAAGTCATCCGCTGTCAGGCTTATGGCGATAACGTTGATCACTTAGCTGCTTTGAAACTTTTGGGGGAGAAAACAACTCTT TTATCACCTGAGGTAGTTATTGAATCTGGGATTCCTTGTTGCAGGTTAATACAGAACCCTGGTGAATTTGTTGTGACTTTTCCAAGAGCTTATCATGTAG GATTCAGCCACGGTTTTAACTGTGGGGAAGCTGCCAACTTTGGAACCCCACAATGGCTTACAGTAGCTAAGGAAGCCGCAGTGCGTAGAGCTGTGATGAA TTATCTTCCCATGCTCTCCCATCAGCAATTGCTTTACTTGCTGACCATGTCTTTTATTTCAAGAGTGCCAAGAACACTATTACCTGGTGTGTGTAGTTCA CGTCTAAGAGGTCGGCAAAAAGAAGAAAGAGAGTTGTTAGTAAAAAAAGCTTTTATAGAAGATATGTTGCAGGAAAACAAGCTGATATCCATCCTTCTTG GAAAGGAATCAACCAAACAAGCTGTTTTATGGAATGCTGATTTACTACCAAATTTCAGTAAAGATGGTTGGTTCTCTGATATAGCGTCTACTAGTGGAAT TTCTGCAGCCAACATGTCAAATATTAGTTCTTCAGATAAAAGCAGCCATCATCTGTTTGACGAGATGAGTTCGTATATGGACAATCTGAGTGATTTACAT CTTGGGGATGATGATTTTTCACATGACTTCCAAACTGATTCAGGACCCTTGGCTTGTGTGGGTTGTGGACTCCTTGGTTTTCCATTTATGACTGTGGTGC AACCATCTGAGAAATTGATAATGGAACTTTTTCCTGTTAATCATCATCTAGTTCAAGATTCCTCTCTGAACTCTACTGCCTCCCTTCATAGCTCCACTTC AAATCTTTGTGTTTCTGAACTTTCTTCAGCAAAGGAACCATCTAATCAATCATTGAAGACATTCAATAAATGTTGGAATGCCTCCAGTAAATTTTTGAGG CCACGGATTTTCTGCCTGGAGCATGCTGTTCAGATAGTGGACATGTTGCAGTCCAAAGGTGGAGCCAATGTGCTAATAATTTGCCATTCCGACTACCAGA AAATGAAGGCACATGCCAGTGCAGTTGCAGAAGAGATACACAGTGCTTTTGATTATAATGAGGTTCCATTAGATATTGCATCCCCAGAAAATTTGACTCT GATTGATTTGGCAATTGGTGAACAACATGATGAATGTGAAGACTGGACATCCAAACTTGGCATTAACCTTCGGTATTGTGTCAATGCAAGAAATAACTCT CCATCTAAACAAGTTCTCTGGACACTAGCGTTAGGGATGCTGTTCTCCGATAAACATCCTGGTTTAGACTGTTTATCATTAAGTTGGCAGTCACGGAGAT CTCGGTCAAAAAGGTTAAATCATTCAGCTCAGACTAAAACCTGTGACATAATTCAGAGAAAGAAGGATGATCAGTTGGAGGGAAGAAAAGATGGCTCCAC TGCTAAAAAGAAGCTAATTCAGTATTCAAGAAGAAAGATCAAATCAAAGCAAAGTTGTTCCTCAGGACCGAGCATGGTCAATAAATTCCAAGAGAAGTCC ACAAACATGGCAGCTGTTTTGAGTGAGGAGCACTATAAATGTGTTTCTAAAAGTGATCTTGACACTAGGAACTTCAGGAGTGAATGTGCATTGTCAGGTG TGTCTACTTCTACTGCACTGTCTCCGGCGCATCATGAAATGTCTACAAAGAATCAAATTACAGAAGCATTTGTCATCGACAGTAATGGTAATAGGCCATG CTTAGATGATGAAATACATAAAGAATATCAGTCTACCTGCAAAAGCAACAATGAGGAAGCTGCTTTATCTACTGTTTCATTGGCAAATCAACCTATACTT GCTTCTATGGGTGAAAGTTTTGAAAGTCCAAATAACAATTATGCTGCTGAAAAAATTAGCAATGTTATGTCCTTAAATGAGACAAGTGGGCAAGAAATTA ATTCTTTGAGTGAAAGGGGCGAGGAACTTCTAAGTGATAATAATAAATCAACAAGTGAATATGCGCCAAACGGAGAAGTTTGTGAAATTCCAAGAGAGCT TTATGCTGCTTCAGACTTGAATGATACTGTCATCTTGGATGCTGAGAAGCAGTGCCAAGTCCAAATTAACAGCAAGCTTAATGAGGAGTCTGTTTCTAGT TATGTTGCAAAAGGTGGAAATAGAAGTGTAACTTTGTCAGAATTAGGATGTTCTGAAGTTACAATGGAAACATGTCCTCAAGAAAACTCGTGTATTAAAT TTATTTCAGATAAAGGAAAGGAACCGGAAATCCAACCAACTAGTAGAAGTGATGAGGAAATTTGCTCTGGTACTGAGACACTATTAGAGGACTCTTCCGT TTCAATCCAGGAATGTTCTAATGTAAATGGAAGCGAAGTTCATTTATTACAAGATAATACGGAACCAGAAAGCTCTAAGTTGACTACAGAAGCTACCCAA TCAAGCGCTCAGAAGAAAAGAAAGAGGGAAGTGGAACAGCTAACAAAGAACCAATCTGATTGCAGTAACTTTATAAGAAGTCCATGTGAAGGGCTGAGGT CAAGAGCTGGCAAAATCACTGCAGATAAAAGAAGGGGGGAGAGCAGCCAAAATGACAAGGAACATCAGGATGGTAGAAGGGCACAGAGAGTTCCGGTTCC TCACAAGAATAAAAATGATGATGTCAAAAGGCCACATAGTTGTGACCTTGATGGTTGTGGTATGACTTTCTCGACAAAGGCCGACTTACAGTTGCACAAA CGTAACATTTGCCCACATAAAGCATGTCGTAAGAAGTTCAGCTCCCACAAATATACCCTGCTTCACCAGCGTGTTCATGACGATGAAAGGCCCCTCAAGT GCCCATGGAAAGGTTGTTCCATGACATTCAAATGGGCATGGGCAAGGAAAGAGCACATACGTGTGCATACCGGGGAGAAGCCTTATCAATGCAAGGTTAA GGGATGTGGCCTTTCCTTCAGGTTTGTATCCGATTTTAGCCGGCACAGGCGAAAAACAGGACATTATGTGCAGTCTTCATCTTGAGATATAAAATTCATT TTGTACTTTATCCTTTTCTAATTGTGCACATATGCAATTAAGGTCTTAAGAAGTGAAGCACAGAGTCATGTCTGACCTGAAGCATTGTGGTTAGTTGTAA ACTTAGGATATGAATCCATATCCATTTTATGTTTAAGGCAATAGAGTTGGTACTGGTAACTTGTCATAGTTTTGATCTTTTGGGATTAATAGACAGAAGA TTTAGCAGCTGCCTCTACAGGATGGAAAACTCTCCAGTAAAGGGTGCTACATTATCATGTTGGTTGTTCATATCTCTGCATGATTAACTGTACCTGTGGT TCTTTTGAAGCACAGTTAATATGTGCTTGATCTTTCTGTATAGTTTGTTCATTGTGGTTGTTAATTTAATGGTTTGGATTAACAACCCATTTGTTTTAGA GTACAAGAAAGCTGACAGTTGAGTTGACAAAAGATGCTTTAGGGTACAATACAATTATATAGTGGGTACAATACAATTTTCTCTACACGAATAATAAATA AAAGATGCTTTAGGGTGAATAGTTGCATTGATTTACTAGGGAGTATTAAATGATACAACACATTACTTGATTTGCCTATATTTGTAAAACTTTAATTTCT GTGAGTGAAATAAAAAAACAAACCTATCG
• Tissue: flowers
• Gene name: LI_gene_74615;
• Additional information: details;

Expression of Ll_transcript_79596

FPKM

• FPAB: 1.7
• FPNAB: 2.4
• LF1: 2.4
• LF2: 2.2
• LF3: 0.6
• LF4: 1.4
• UF1: 1.7
• UF2: 2.1
• UF3: 1.6
• UF4: 1.3

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_79596

• Blastp: Probable lysine-specific demethylase ELF6 from Arabidopsis with 46.56% of identity
• Blastx: Probable lysine-specific demethylase ELF6 from Arabidopsis with 46.48% of identity
• Eggnog: Zinc finger protein(COG5048)
• Kegg: Link to kegg annotations (AT5G04240)
• CantataDB: Link to cantataDB annotations (CNT0000082)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019428053.1)
• Pfam: jmjN domain (PF02375.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;