Id Trinity | FTRINITY_DN58150_c0_g1_i9 |
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Name Transcript | Ll_transcript_80136 |
Sequence | GTTATATAATCCCACACGCACCAACAAATCAAAATGAAGAAGAAACTTCACAATTCACACTCACAATTTGTTTAGAAAATAAGTAGGAATATTATTTGAT TTTATTTAATTAAATACACAAGCGCGTCCAAAGATAGAATTAGTGAATAACCAACACTTACAAGTATTTCCATTTTTATCACTATCTGTATTCCAATCTC AACGAAAATATAAAACAAAGCAACCGTCACAGTCTCGATTCGCGACGAATTATGAGCTCCAGCGGCGGCGAATCAACATCTTCCGACAAGCAAAAGGAGA AGGCTAGGGTGAGCCGCACCTCCTTGATTCTCTGGCACGCGCACCAAAACGACGCCGCTTCGGTGCGTAAGCTATTGCAAGAGGATCCCTCTCTTGTTAA CGCCAGAGATTACGACAACCGTACTCCTCTCCACGTGGCCTCCCTCCACGGCTGGATCGACGTCGCTAACTGCTTAATCGAATTCGGAGCTGACGTCAAC GCTCAAGATCGCTGGAAAAACACTCCTCTGGCTGATGCGGAAGGAGCTAAACGAAATAGTATGATTCAGCTTTTGAAAACACACGGAGGCTCGTCTTATG GTCAAAATGGGAGCCATTTCGAACCTAACACAGTTCCTCCGCCATTGCCGAACAAGTGTGATTGGGAAGTTGACCCTACTGAGCTGGACTTCTCTAATTC AGCACGTATTGGAAAGGGCTCTTTTGGAGAGATTTTGAAAGCCCATTGGCGTGGAACACCGGTTGCTGTCAAACGTATTCTTCCTTCCCTTTCAGAAGAT AGATTGGTGATGTGAGATTCTCTGTTTCTTTTCTAGCATGTCTTTGATTTTGTTGCTACTAGAGTCTGAATATGTGTGATTTAAATGTCTTATAATAACA TGCTGTTGATCAACCTGTTAAAACTAAGGTCGCTTTTGCCTATCATCTGTCATGTCTTACATTAGCCCTTAGGGCAACATTTCAACAAGAAACTCTTTTC TGAAGGCATTTTGTCCAAGTTGTATCTACTTCCTCTTTAGGGCATAGTAGTTTATATTATAAAATCGTTGGATATTTGATTATTGCATAATAGTGGGATA AAGGCTTGGTTATTGTATTTAATTATGTCTGTTTATAATGAATGTTCAAAATGTAGTGAGAGGGAGAAAGACATACACAAGAGACTTTTGATTAAGCTTG TCCTTGTGTAGCAATAAACCATATTTTCTCTTTTCCAGGTTTTTCTGCTATCTCAGGTTTCAGTGACTGGTCTTCTTCTGATTTTTTTCTTGTGGATAAA TTTTTAATACAGTCAGGACTTCAGGCATGAGGTCAATTTGTTAGTGAAGCTTCGACATCCCAATATAGTTCAGTTTCTTGGAGCTGTTACTGATAGGAAG CCCCTTATGTTAATTACTGAGTATCTAAGAGGGGGTGACCTTCATCAGTACCTCAAGGAAAAAGGTTCACTTAATCCTGCAACCGCTATCAACTTTTCCA TGGATATTGCCAGAGGAATGGCCTATCTTCATAATGAACCAAATGTTATAATTCATCGAGACCTGAAGCCAAGGTAAGTTGGTTATTAGCATGCATATAT GAAATATTGATTTGGATGACCTGCTACAAACAGCATATTATGATCTATTACACAAGGAATTTAACCAAAGTTTAGTTTCATCCTAGATTTGCAATATTTT ATGTCATCAAGAACATACAGTGGAATTTAGAAGTCCTTGTTTTAGATGGTGAAGTTTATTTTCTAAAATTTCAGGAATGTTCTTTTAGTTAATTCTAGTG CTGACCATTTAAAAGTTGGAGATTTTGGATTGAGTAAGCTTATCAAGGTCCAAAGTTCTCATGATGTATACAGGATGACTGGTGAAACTGGAAGCTGTGA GTATTCTTACAAGTTCTTTTAAAACAAGATTAGTCATTTGTGTGCAAAACTCATTTTAATTTCCTTGTTCTTGAGGATATAAAAGATCGCTACATGGCTC CTGAAGTTTTCAAGCACCGGAGATATGATAAGAAGGTTGACGTGTTCTCTTTTGCGATGATTCTATATGAGATGCTTGAAGGTGAACCACCTTTTGCAAA TTATGAACCTCTTGATGGAGCCAAACGGGCAGCAGAAGGACACAGGCCTACTATACGTGCAAAGGGATACACCCCTGAACTGATAGAGTAAGTCATTTAT GATGGCTTTTTTAGGCAATTTAATTGCATGTTATTAAGAGAGTTGATTTTTAACATGTGAGTTCCTCTTTGACCAAATAACAGTTATTGTTGTTATCTTC AAGTGGATTTATTCTTTCTCCACACTTCTAGCCCAAAAGGCTTTCACATGACAGGGCATGTGAGATATAGATCATTGTATAGCTTGCACATGATAGTTGA AGCTTTCAAGACACTAGGCCCTTTAGGATACTAAATTAAAATACTAAATGGAAGTTACAAGTTTTCTATTGAACTTATGTGAATTATTTTGTTTAGTTTC ACTTCTAGACTAACTTAAGAAAAGGAAAGTTGATGTCTTTAAAGACATACTACCAGAAGT BLAST |
Tissue | flowers |
Gene name | LI_gene_74624; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_80136
Blastp | Potassium channel SKOR from Arabidopsis with 43.75% of identity |
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Blastx | Serine/threonine-protein kinase HT1 from Arabidopsis with 48.28% of identity |
Eggnog | Potassium voltage-gated channel, subfamily H (Eag-related), member(ENOG410XPSE) |
Kegg | Link to kegg annotations (AT3G02850) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019422305.1) |
Pfam | Ankyrin repeats (3 copies) (PF12796.6) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |