| Id Trinity | FTRINITY_DN58160_c1_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_80015 |
| Sequence | TTCCAATACTAGACTCTCCATTATCCGATAAAAACTTGTCTCCTTTCTGTTGCTAATAGTTGTGTCCAATATATTGGTACCCTTTATTCTTAGACTCTCA TGTGGACTTTGAAGCATGTTAAACAACCCAAGGGGTTAAAAGTTTAGTAGTACATGGGATATGAGAGATGGATGAGAAAGAACACAACCAAGATCATAAC CACCCATCTCTTGTCCCTAACCATAACACCACAAATACCATAACTCCCAAAAAAGAGTCTCTAAGAAAACCTATTATCGGTGGTGATAGGCTGAAGAGAG ATGAGTGGAGTGAAGGAGCTGTGTCCACTCTTCTTGAGGCCTATGAAGCCAAATGGGTGCTTAGAAATAGGGCTAAACTCAAAGGTCAAGACTGGGAAGA TGTTGCAAAATATGTTTCATCAAGAGCAAATTCAACCAAATCACCAAAGACACAAACACAGTGCAAAAACAAGATAGAGTCTATGAAGAAAAGGTATAGA TCAGAGTCAGCAACTTCAGATGCTTCAACTTGGCCTTTATATTCTCGTCTTGATCTTCTGCTGCGTGGAACTGGGCCAATATCTAGTGTACTCCCACCAC CACCAATAGTAGCAGCACCTTCTCAATCACTATACCCTACCAATAATAACCAAGCGTTGATGTTGTTAGAGCCATCACTGGCGGTGTCACAACCACCACC TCCGGCTGCTCCACCACCGCATGCAACTGCACAAAACTCACATGGCTCCAATGGTGTTGATAGATTAGCCAAGGAAGATGGGTTAGGAACTAAGTCATCT GACCAAGTATCTAACAAGAATCCATTGGACACGGATAGTAGCACACCTGCTCTTTACAGTGAAAAGGAGAACATAAGATGCAACAACAAGAAGAAGATGA AAATGGACAGCAACAAACGGCAAAGGAAAGAACACATGGACATAGCAGAAAGTTTAAGGTGGCTAGCTGAAGTTGTTCTAAGATCAGAACAAACAAGAAT GGACACAATGAAAGAAATAGAGAGGATGAGGGTTGAAGCTGAGGCCAAGAGAAGTGAAATGGATCTTAAGAGAACTGAAATCATTGCCAATACACAATTA GAGATTGCTAAGATCTTTGCAAGTGTCAATAAAGGTGTTGATTCATCATTAAGAATTGGAAGAAGCTAAGAGTAAATTATGGAACCTCATCCTATGATTC ATGAGGATTGAACTTATAAATTATTACCAATATAATATAGGTGAAGATCAATTTAGTTTCAGAGTAAGTCTTTTTAGACTTATTACTCATCTTAGGCATC AATTCATTGAAAATCCAATGATTTGAATTTACCACTAATTCAATCCATTAGATTTCTCTATAATTGATGATTAAGATAATGAATAAGTATGTTAAACTTA CTCTTGAAGTAAATTGATATTTTTAGTATAAAGTATAAATCATTTCCTATTTGAATATTATAAGAACGCGCATTAATCCATTTGTGGCCAACTTCATTTA TCCCCCATTGCCATTATATTATGATGACATATAAGGTAAAAGGAAATGTATCGCTCTTCTATTGTAGGAGTAGTAACAGTTCCAAGATTTCATATGTAAC ATTCAAAATTTAACATCTTCCACTTCGATATTAAGGGCACAGTTCATATAAAGGTTTTGCATTAACAGAGTAAAGTCTTTTGAATGTAATTTTTATTGTT TATGTATAAATAATAAATGATAGATTGATAATGTGAAAAATCTGTAGACTATTGCTGATGGACATCCATTATTCCATTAAACTTATAATATATACTAAAT GCATAGCTCAGTGCACTATTCACCAATGTGGAACCATCGATATCTTCAATTTTGACAAGAATGCTGATACTTCAAAGTTTTTGATGAATAAACTTTATTA TTTAGATGACACATGATATTAGAACACCAAATCATAACTATACTAAATAGATATATACCTCTTTATGCCACGATGAATAATAATATTGGATCTTATGCAA TGTTTTTCCTTAATACCTAATTCAAGGGTGTACATATGTTGCTCCATATTCAGTGTGTGCTATGGTCTTGCGATTGATTGAAGAAAATATATTTAAGTTA AAATTTAATTTTTAAGTAATTTTCTAATTAATGACAAAATCATAACACATGAAGTGACAATAAGTGTGAGACACCAGATTTGTACGAGAACAATAGCGAT AAGATGAAAAAGTACATACATGTCTTGTATGTGCATATAGCAATTTGTAATCCATTGGGCCTATATGAAGATGTAAAGTCCATTTACTATTGGATCATAA TAAGATGAACGAATTTGTTGTATATCACAATTCACAACTCCATCGTGTTGAAACAAAACCACATTCCTCCACTGTTGTTGTCTTGTACCTCCTAAATTTA TCCGTAGGAACACTTGTTCCACTTTGTTCTTTGTTGTTTCCACTTTCCAATTAATACACCATGGCTTCTTCTCTCTTATTACCACTCTCTACCCCTTCTT CACCTTTCACCTTCATCGATAATTCTGCTGCCAAATCCTCCTTCTTTCATGGAACAACGAAGCTCTTTCCGTCTTTCCCCAAAACCACGAACAAAGTGGA ACGCAGGTGCTTCAAGTCTCCTTTTGCCAAATCCTCCTTCGACAATATCCCTAATCAGTTCAGAGAGGAAAATCTAAAGGATGGATTGATGGATAACTAC AAGAGTGCACCTAAGCATCTATATGGCCTCAGTCCTTCACAAATGGACATGTTCATGACGGAGGACAACCCTATCCGTCAGCAGTCTGAAAGAGTTACAG AGGAGAGCATCTCATCTGCCAAGAATTATTTAGATCAAGGTGGCATGTGGAGCCATTCTAGCATGGGTAATAACGGCCCTGCAAAATACAGCATGAGTGT TAGTATGTATCGAGGAGGTGGTAGAGGAGCTGGAAGGCCAAGAACCGCTCCACCAGATTTGCCTTCTTTGCTCTTGGATGCTCGTATATGCTATCTGGGT ATGCCGATCGTACCAGCTGTGGCAGAGCTTCTCGTTGCTCAATTCATGTGGTTGGATTATGATAACCCTAAAAAACCTATATACTTATATATTAATTCAT CTGGCACTCAGAATGAGAAGAATGAGACTGTGGGGTCAGAAACTGAGGCATATTCCATAGCTGATATGATATCTTATGTCAAATCCGATGTCTATACTGT GAATTGTGGCATGGCATATGGTCAAGCTGCAATGCTTCTGTCACTTGGAACAAAGGGTTATCGTGCTTTACAGCCAAATTCATCAAGTATGAATTATATC TCTGCAAACCTTTGAAATTTTTGCTTGATTGCTTTCACTCATTTACTGTGACCTTTCAAACTTCTGATAAATGCTTCCCTCTAGATCCCTTACTCTGTAT CTCGTTCCCGAGTATATTAGGAGAATGTGCTACTGAATAATAATTTTACAATCATCCACGTTGTTGTCACACAGTACATCTTTTGATCAAATGCTGCTAA TATATCTGTTAAGGAGTATTTTCTAGAGGATTAGTTTATCAAATGCCTAGTTCTTCTGGAGCCTGAGTGTAAGAAGGGTAGAGTTATGATCTGTGTAGTT AAACAACCATACTTGATATTCTGCATTGAGATTTGAAACTGTTAGGCTGCCATAGGACTTCTGAAAAAGTAATCCCGGTTTTAATGGAACAAATGAAACA ACGCCGATCCTTATCTATTGCTATTATCTTCTGCAATATGCTATAAAAAAACATGGCCTACATGGCAATTGAATGAAAAGCTATAGCAGGCTCTTTAATT AGCCATTGTTTTTCCTGTTTATGTGTGGCTTTCATATTAGTTATCCCAGAACATGACTAGACCCCAATTTAGTTATGTTAGGATGACTTGTGGTGGGATG GAATGGCATTGTTTCCAAGCTGTTGTTTGGATATTTAGGACGGAATGAAGGAATGTTTCCATTACATATTTTGTAAGTTCTAGTGAAATGGAATTAGTTA TAAGCATTATGTTCCTATGCCATTCCAGTCCTTAGGGGGTAGGGGTGGAATGAATGCCACCCCATGTATTTCCATCCTAGTGTTCAATAAGTAAACATTG GTACTCAAGCTCATTCCAATTCCATTGCTTTCTACCAATCCAAACATACCCGAAGTTTGTGGTACTGTTGTCTATTGTGGACATTTTCTTGTTACTACAA AACAATGATAATTTGGGAAATAAAATTGAAATGTGTTTCAACTGGACTGCATACAGAGCCTTCTTTCGAGGCTATAAATTTCTACATTGGGATATTTCCT AATTGTCAATTGATGCCTTTGAAATGGAGTAGAAGGTTTTCTACCAAAAAAGGAAGTTGAAAGATAAATAATCGGATGCTTTGTATGGATTATGTGGAAT ATCATGATGCATGATTTTTAGGTGCGGCCTTCTCTTACTTTTACTTGTAAACTGCTTTCAATT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_74681; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_80015
| Blastp | Trihelix transcription factor ASIL2 from Arabidopsis with 24.48% of identity |
|---|---|
| Blastx | ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic from Arabidopsis with 68.3% of identity |
| Eggnog | NA(ENOG410Z419) |
| Kegg | Link to kegg annotations (AT3G14180) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019427397.1) |
| Pfam | Myb/SANT-like DNA-binding domain (PF13837.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |