Ll_transcript_80036

Id TrinityFTRINITY_DN58160_c1_g1_i15
Name TranscriptLl_transcript_80036
SequenceATAAAAAATCGTAGAAATAAGATAAATAAGACACACGTCATGCAGTAAATGAACTTAAGAAGATAAATTATGTCGTGGTATACTTTATCCTCTTCTTTTT ACTACAATTATGAAAAGTCACGGAAAAATGTGGCTGTTTAAATTATAGTCACCGATACCATCATAGAGACTTCTAAAACCACAATTGTAATTGTCGAGTG TAATTTGGAACAATTTATATTAAATACAAAAGTACATAAATACATAAATCTATGTGTTTAATTTGTCATTAACAGGAAGATGGGTTAGGAACTAAGTCAT CTGACCAAGTATCTAACAAGAATCCATTGGACACGGATAGTAGCACACCTGCTCTTTACAGTGAAAAGGAGAACATAAGATGCAACAACAAGAAGAAGAT GAAAATGGACAGCAACAAACGGCAAAGGAAAGAACACATGGACATAGCAGAAAGTTTAAGGTGGCTAGCTGAAGTTGTTCTAAGATCAGAACAAACAAGA ATGGACACAATGAAAGAAATAGAGAGGATGAGGGTTGAAGCTGAGGCCAAGAGAAGTGAAATGGATCTTAAGAGAACTGAAATCATTGCCAATACACAAT TAGAGATTGCTAAGATCTTTGCAAGTGTCAATAAAGGTGTTGATTCATCATTAAGAATTGGAAGAAGCTAAGAGTAAATTATGGAACCTCATCCTATGAT TCATGAGGATTGAACTTATAAATTATTACCAATATAATATAGGTGAAGATCAATTTAGTTTCAGAGTAAGTCTTTTTAGACTTATTACTCATCTTAGGCA TCAATTCATTGAAAATCCAATGATTTGAATTTACCACTAATTCAATCCATTAGATTTCTCTATAATTGATGATTAAGATAATGAATAAGTATGTTAAACT TACTCTTGAAGTAAATTGATATTTTTAGTATAAAGTATAAATCATTTCCTATTTGAATATTATAAGAACGCGCATTAATCCATTTGTGGCCAACTTCATT TATCCCCCATTGCCATTATATTATGATGACATATAAGGTAAAAGGAAATGTATCGCTCTTCTATTGTAGGAGTAGTAACAGTTCCAAGATTTCATATGTA ACATTCAAAATTTAACATCTTCCACTTCGATATTAAGGGCACAGTTCATATAAAGGTTTTGCATTAACAGAGTAAAGTCTTTTGAATGTAATTTTTATTG TTTATGTATAAATAATAAATGATAGATTGATAATGTGAAAAATCTGTAGACTATTGCTGATGGACATCCATTATTCCATTAAACTTATAATATATACTAA ATGCATAGCTCAGTGCACTATTCACCAATGTGGAACCATCGATATCTTCAATTTTGACAAGAATGCTGATACTTCAAAGTTTTTGATGAATAAACTTTAT TATTTAGATGACACATGATATTAGAACACCAAATCATAACTATACTAAATAGATATATACCTCTTTATGCCACGATGAATAATAATATTGGATCTTATGC AATGTTTTTCCTTAATACCTAATTCAAGGGTGTACATATGTTGCTCCATATTCAGTGTGTGCTATGGTCTTGCGATTGATTGAAGAAAATATATTTAAGT TAAAATTTAATTTTTAAGTAATTTTCTAATTAATGACAAAATCATAACACATGAAGTGACAATAAGTGTGAGACACCAGATTTGTACGAGAACAATAGCG ATAAGATGAAAAAGTACATACATGTCTTGTATGTGCATATAGCAATTTGTAATCCATTGGGCCTATATGAAGATGTAAAGTCCATTTACTATTGGATCAT AATAAGATGAACGAATTTGTTGTATATCACAATTCACAACTCCATCGTGTTGAAACAAAACCACATTCCTCCACTGTTGTTGTCTTGTACCTCCTAAATT TATCCGTAGGAACACTTGTTCCACTTTGTTCTTTGTTGTTTCCACTTTCCAATTAATACACCATGGCTTCTTCTCTCTTATTACCACTCTCTACCCCTTC TGCACCTTTCTATCTCTTCGATAATTCTGCTGCCAAATCTTCTTTCCTTCATAGTACCACAAACCTCTTTCCTTCTTTTCCCAAATCCACGACCAAAGTG TCACGCAGGTGCTTCATTTCTCCTTCTGCCAAATCCTCCTTCGACCATATTCCGAAGCAGTTCAGGAAGGATAATCTCAAGGATGGAAGTGAGTTTTTTT ATCTTTTATTTTTGCACTCTTCCTTCATTTTCAATGGAACCCATCATTTATGTGATTACTAATGCTAATTTACAGTATTTTGAATGGAAGAAAAGATGAA ATTTAGAGCAGAAACATGAAAAAGATTAATTATTGGTGGTTTTTGAGATAAAGTTAGAGCAGAAACATGAAAAAGATGAAATTTTTGTTGCCGGGTCTGA ATTTGTTTATTGATTTTTTATGTGATTGATGGTGATACTGTCAAACTATATGTTGAGCAGGGTGTCTTCAATCATGTTTGCCATGTATTTGAAACTGAAG TAGTAGTAGGTCACTAAACAGTTAAACATGGCTGTGTTCACTTTTAGTTTTATCATAATCATTGTATTTGGCTATTTGCCCTCATGTATTTTTTGTGGAG TTGCTTAGTAGTTCAGGCATTTCTTATTGCTCATTGCTGAGTATATGTGTCTGGTTATTGCTGAGGTATGAACATCCCCTTAACGAAGATTCAATATTTA GTTTAAAAACAATGATACTCACATCATATCGTATAATCCATTGATTACATTGGGACTCATCGATTTCAGCTGAGGATTCCAATACCTCCTTTAGAAAGAT GAAATACTTAATAATTTAACAACAATATTAGTCACACACTTACACTCACTTCACCTCACCACAGTTTTCATTGTCCCATTACATCTGGAGTCATCTCCCT TTGTACAAACTTACACTCTAATTCTTTCTCTCTACAGCAGCAACGAAATCATAAACCCCACTAGGTGGGGTCGGCTACCAAGATCGAACAAGCCATAATG CTCAACCATTGACGAAACATTAATCTCTAAATATTTATTAGCCATTTTGCCTATAGTTTTTCTTGGTGTTCCTATGCTTCTAGAACTATTTCCACTGTCA GTCCCGACTAAATAGTTTCAGTGTTTCAAATGGGTAAAGTTTGTTTTGAAATATGAAGATTGGGGAGGAGAGTAGCATTTTAAATTGTCACACCAAGAAT GAATTTGAACGATAATTTCAGGGAGGCAGACTGTAACGTACCCCACACACACACACACAATTTTTTTGTGAAGAATTTCTAGTAATCTAGTTCGATTGAC GATTGAAAAGTTAAATTTGGGTGCTCAAACTTGACCTCTATCTTTATTGTGTGTAGTGATGGACAACTACAAGAATGCACCTCAATATCTATATGGCCTG AGTCCTTCACAGATAGACATGTTCATGACAGAGGACAACCCTATCCGTCAGCAGACTGAAAGAGTTACAGAGGAGAGCATCTCATCTGCCAAGAATTATT TGGATCACGGTGGCATGTGGTCTCATTCTTGCATGGGCAATAATGGTCCTTCAAAATACAGCATGAGTGTTAGTATGTATCGAGGAGGAGGAGGAGGTAG GGGAGCTGGAAGGCCAAGAACTGCTCCACCAGATCTGCCTTCTTTGCTCTTGGATGCTCGTATATGCTATCTGGGTATGCCGATTGTACCAGCTGTGGCA GAGCTTCTTGTTGCTCAATTTATGTGGTTGGATTATGATACCCCTAAAAAACCTATATACTTAT BLAST
Tissueflowers
Gene nameLI_gene_74681; 
Additional informationdetails; 

Expression of Ll_transcript_80036

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_80036
BlastpATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic from Arabidopsis with 74.81% of identity
BlastxATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic from Arabidopsis with 75% of identity
EggnogCleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins (By similarity)(COG0740)
KeggLink to kegg annotations (AT1G49970)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019427397.1)
Pfam-
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;