Id Trinity | FTRINITY_DN58162_c1_g2_i12 |
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Name Transcript | Ll_transcript_81469 |
Sequence | GTAATATGTCATCTAATCTGAAATCGGTCCAATACTTCGTCCTCATCTCATCCAATACTTGTCCTGAACCGGTCGGATGCTTCATCCTGAACCGGTCCGA TGCTTGTTCCTGAACCGGTCGGATGCTTGTTCCTGAACCGGTCCAATTTTTCATCATGAATCGGTACAATTGTTCATCCTGAACCGGTCCACTCTCTTCA TCCTGAACCAGTCCACTCTCTTCTGCGACGTTTCTCCCTCAACACTTTTCTTCTTCAACCTTTCACCAATTCAACACGTTACGCTTTCGTTGCTTCATTC AACCATTTCTATATAATAATTCCCTAACATTATCGAAATTCTAATTTGAAGAAACCATTTCCTTATCTGATCTCGTTTCTGATTCATCTCTCTCTGTTTC TCGCGATTTAGAGCACCATGTCGATGTCAGATTCTGATTCCTCATCTTCTTATGGCGTTGAATACAAAAATTTCAAACAAATTAGCCGTGACCGATTATT ACATGAAATGCTCAGGTCAGCTAAAACTGGGGATTCAAAATCAACATGGAAGGTACTAATAATGGACAAACTTACTGTAAAGATAATGTCTCACTCTTGC AAGATGGCTGATATCACTAATGAAGGTTTTCCATTGGTTGAAGACATAATGAAGCGAAGGCAGCCACTGCCTACCATGGATGCGATATACTTCATCCAGC CAACCAGAGAGAATGTAATTATGTTTCTGTCAGACATGTCTGGAAGGACTCCTTTATACAGGAAGGCATTTGTTTTCTTTAGCTCATCTATTCCCCGAGA ATTGGTTATGGACATTAAGAAAGATGCGAGGCTGTTGCCTCGCATAGGTGCTTTGAGAGAGATGAATTTGGAGTATTTTGCCATTGATAGTCAGGGTTTC ATCACAAACAATGATAGAGCTCTAGAGGAGCTATTCCGAGATGAGGAGAATAATCGTAAAGCTGTTGCTTGTTTAAATGTGATGGCTACCCGGGTTGCTA CAGTTTTTGCTTCATTAAGAGAATTTCCTTTTGTTCGCTTTCGTGCTGCCAAGTCCATTGATGCAACTACAATGACTACTTTCCGTGATCTTATTCCTAC AAAGCTTGCTGCTGGTGTCTGGGACTGTCTCATGAAATATAAAAAAAGTATACCTAATTTTCCTCAGAGTGAGACCTGCGAGTTGCTCATCATTGATAGA ACTGTTGATCAGATTGCTCCTGTGATACATGAATGGACCTATGATGCCATGTGCCATGATTTGCTGAACATGGAAGGAAATAAATATGTTCACGAGGTTC CTGGAAAGAATGGTGGTCCACCTGAGAGAAAAGATGTTTTGTTGGAGGATCATGATCCTTTATGGCTTGAACTTCGTCATGCACATATTGCAGATGCCAG TGAACGGTTGCATGAGAAAATGACCAGTTTCATTTCAAAGAACAAAGCTGCACAGATCCAACATGGTTCAAGAGGTAATGGTGAAATGTCAACAAGAGAC TTACAAAAGATGGTTCAAGCACTTCCACAATACAGTGAACAAATTGACAAGCTCTCCATCCATATAGAGATTGCAGGAAAAATTAACAGAATCATTAGGG AGTCAGATCTTCGGGAACTTGGGCAGCTGGAGCAAGATCTTGTTTTTGGAGATGCAGGAATGAAAAATGTGATCAAATATTTGACCACGAAAGAAGATAC GTCTAGTGAAAATAAGTTGCGCTTGTTGTTGATTCTTGCTGCCATATATCCTGAGAAATTTGATGGAGAAAAGGGTAAGAATCTGATGCAGGCAGCACAG TTGACAGATGAGGATGCGCTTGTTGTGAATAATTTGAGAATGCTCGGGGGACAACCAAATACCAAAAAAAGGTCAACTGGTCCTTTTGGTCTTAAATTTG ATATTCATAAGAAGAAGCGTGCAGCAAGGTTAGACCGTTCTGATGAAGAGACATGGCAGCTATTCCGTTTTTATCCGATAATAGAGGAACTCATTGAAAA ACTCGCAAAAAATGAATTGTCTAAGGAAGACTATCCATGTTTGAATGACCCAAGTCCAAGTTTCTACAATGCACCTAGTACACCTTTCCTTGGGCATGTA AACCAAAATTCTCCTGCTCAGTCAATAAGATCGAGGCTCAGACCAACTTGGGCTCGACCGCGAGGCGTTGAGGATGGAAATCAAAGTGATTCACCGCTGA GACGTGTATCCAGTGATTTGAGTAAGATGGGGCGACGAATTGTTGTGTTCATTGTTGGTGGAGCGACCAGATCAGAGCTTAGGGTTTGCCACAAGCTTAC TGGTAAGCTGAAGAGGGAAATTATTCTGGGCTCCTCGAGTCTTGATGATCCTGCACAATTTATTAAGAAATTAAAGACGCTAACGACGCATGAACTTACA TTGGATGATCTCCAGATATGATGTTTTTTTGTAAAATTATAATTGTGTAAATTCTTTGAACATTTGATAGTTTGTGGTTCAACCGAGTCATTGAATGGTG TAATGTGCATATGCTCGAAAATCTTTATTGTTTAACTATCGGAATAATTTATCCAATTTTGCCCAAAAA BLAST |
Tissue | flowers |
Gene name | LI_gene_74707; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_81469
Blastp | SNARE-interacting protein KEULE from Arabidopsis with 73.82% of identity |
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Blastx | SNARE-interacting protein KEULE from Arabidopsis with 73.82% of identity |
Eggnog | Vacuolar Protein(COG5158) |
Kegg | Link to kegg annotations (AT1G12360) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019423843.1) |
Pfam | Sec1 family (PF00995.22) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |