Ll_transcript_79778

• Id Trinity: FTRINITY_DN58167_c3_g1_i10
• Name Transcript: Ll_transcript_79778
• Sequence: ATTTACCAACCCCAGAATTGTATCAAGCAATCAAAACCCGATATTTTGAGATGAAAATGACAACTCGGAGAATTTGATGTTCTGGAAGAAAACGAACGCA GCAGCTTCCTCTTAAACTCGCTTCAGATTCGAAGGATCACCGCCGCCGCCACCGTTGTATCTTACAAGGTGCACCGACAATAACATTGAGGAGGTGGTAA TGGGTGGGAATAAGAAGAGGAAGAGAAAGGAAGAAGTGAAAGTGAAGTGCAAGTATTCAGAAAACTCACCAGATTTTACTCATTTAGCTTCTCTCTACCC TTCATTTCAACCTTTTCTTCATTACTCCTCGCGTCATAATTACCCTACCATCGATTGGACCGATTTTAACGCTACTCGTGAACTAACCCGTGTTTTGCTT CTTCACCACCACTCTCTCAACTGGTGGATTCCTGATGGACAGCTCTGCCCTACTGTGCCCAACAGGTCTAATTACATCTATTGGGTTGCTGATCTTCTCT CATCTGACATCATTCCAAATACCATTTCAAATGGAGGTAAGGTGAGGGGATTTGATATAGGAACAGGAGCAAACTGCATATACCCACTTCTGGGTGCAGC GCTTATGGGATGGAGTTTTGTAGGATCAGATGTGACTGATGTTGCAATAGAGTGGGCAGAGAAAAATGTTAATAGTAATCCACAATTTTCTGAGTTGATT GAAATTAGAAAGGTTGAAAGCAATGAAAGTACTTTCTGTGTGGAAGAGTTGCATTCTGAAAAGCCAGTCCAGAGTAGAACCGAGATAAATTTGTGTGAGA GTATCAATACAGAGGTAGAACCTTTGCCTTCATTACCTCTTGATTCACACATCCTGGAGAATAAGAATTATCGTGGACCTACCATACTTCTTGGCGTAGT AAGGGATGATGAGAAGTTTGACTTTTGCATGTGTAATCCACCTTTTTTTGAAAGTTTGGAGGAAGCAGGACTTAATCCTAAAACTTCTTGTGGAGGCACT TCGAAAGAAATGGTTTGCCCTGGTGGCGAAAAGGCCTTCATTACTCGTATTATTGAAGACAGTACTGAACTGAAGCATCAATTTCGGTGGTTCACTTCAA TGATAGGGAGAAAGACAAATCTCAAGTACCTTACATCAAAACTTTGGGAGGTTGGTGTTACCATAGTTAAGACAACCGAATTTGTCCAAGGCAGGACATC CCGATGGGGCCTTGCTTGGTCTTTCTTGCCTCCTATACAGAAGTCATCAATTTCTTTACCTGAGAAGAAGAGTAACATTTCCTTTCTGGTCGAGGGAAGT AGCAGGGAAGGTTGAAGAACAACTAGCGGCAGCAAGAACTTCAATCAGAACCAATCGGAGTGCCGCAAATGAAGGCGGCGATGAGGGCTATGTTCCTAGC AGAGCTGTGTATTGGAATCCACGCTTATTTTACAGGAGCTACTTGGAGATGAGAAAATATTGAAAGTGTATGTATATCCAGATGGGGATCATCCAATAGC TCATGATGGACCATGCAAAGACATATACTCAATTGAAGGAAGGTTCCTCCATGAAATAGAACATGGTCGTGGCAGGTTTATGACCAATGATCCTAGTCTT GCTCATGTTTACCTTTTGCCTTTCAGTGTAGCTTGGATGGTGAAATATCTGTATACACCACTCTCTTATGACCACTCTCCTTTAAGGCAATTTGTCTTTG ATTATGTTAGAGTCATATCTACTAAGTACCCTTTCTGGAATAGAACTCATGGTGCTGACCACTTCACTTCATGCTTGCTTGTCATGATTGGGATCTTCCA TCCCAACATGGTGCCTTTAATGTTTTGGAAGCCATCAAGTCTTACTTCTCTTTGTATGGCCTATCATGTACATTGAATCCCTCCTCTTTCACGGTGGATG TCCTGGCGTCCAAAGATTACTGTGATTCAATCTTGAAGAATGAATTACCGATTATCAATAAATCCATCAATTGTCAACCTTCAGGAGAGACATCTAATGG ATCAAGTTTGAATTCCTCCGCTGATAGATTAGGCCTCCGTATATCGGTTTTTCAGCAAAGCCGTAGGACACTGTTGGTGAAAGGTTCATTACAAGATAGG AATAGCCCATTATCAGGAGCATTCTCAGTGATATTCCAAAAGCTGGAGGAAGCTTTGCGAAATAAATTTTATACAAAATTGGCCTGATGGTTTAGTTATT TGACTTATCACTTACAAGTTATAGGACTGAGTGATTGGATGATATGTTGTCGAATGGAGATAAGTTCATGAGTGCTATATAGTCGGGGCCACGGTTTGTA GAATACATAACTGAAATCGCACTTGACGTAGAATGGAAATAGAGCACAACAATCATTTCCAAAGACACTATTGCTCAACAACAATCAAGCCTTAATCTTG AGGCAGTGTTCCTCCTTGTAACATTTTTGGTAGATCATGTATATTTATTTTTGTACCAAACCGCTTAGAACTATTCATTTGGTTTGAAAATTGTCCTAAG TGGGATCTGTATTTAAAAATACCAAACTGTCATTTTGTACATGGTACATGGTATCTGCTTATTTTTTACTCAGTATTTGCATCTATGGTGGCAAAAATAA CATGTCCATTATTATCTCC
• Tissue: flowers
• Gene name: LI_gene_74760;
• Additional information: details;

Expression of Ll_transcript_79778

FPKM

• FPAB: 1.4
• FPNAB: 3.3
• LF1: 1.9
• LF2: 1.7
• LF3: 1.5
• LF4: 2.6
• UF1: 1.9
• UF2: 2
• UF3: 2.1
• UF4: 1.9

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_79778

• Blastp: U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase from Dictyostelium with 39.32% of identity
• Blastx: U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase from Danio with 35.54% of identity
• Eggnog: Specifically methylates the adenine in position 1618 of 23S rRNA (By similarity)(COG3129)
• Kegg: Link to kegg annotations (DDB_G0275203)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019460068.1)
• Pfam: Protein of unknown function (DUF890) (PF05971.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;