| Id Trinity | FTRINITY_DN58167_c3_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_79772 |
| Sequence | ATTTACCAACCCCAGAATTGTATCAAGCAATCAAAACCCGATATTTTGAGATGAAAATGACAACTCGGAGAATTTGATGTTCTGGAAGAAAACGAACGCA GCAGCTTCCTCTTAAACTCGCTTCAGATTCGAAGGATCACCGCCGCCGCCACCGTTGTATCTTACAAGGTGCACCGACAATAACATTGAGGAGGTGGTAA TGGGTGGGAATAAGAAGAGGAAGAGAAAGGAAGAAGTGAAAGTGAAGTGCAAGTATTCAGAAAACTCACCAGATTTTACTCATTTAGCTTCTCTCTACCC TTCATTTCAACCTTTTCTTCATTACTCCTCGCGTCATAATTACCCTACCATCGATTGGACCGATTTTAACGCTACTCGTGAACTAACCCGTGTTTTGCTT CTTCACCACCACTCTCTCAACTGGTGGATTCCTGATGGACAGCTCTGCCCTACTGTGCCCAACAGGTCTAATTACATCTATTGGGTTGCTGATCTTCTCT CATCTGACATCATTCCAAATACCATTTCAAATGGAGGTAAGGTGAGGGGATTTGATATAGGAACAGGAGCAAACTGCATATACCCACTTCTGGGTGCAGC GCTTATGGGATGGAGTTTTGTAGGATCAGTTTGGTAAACGGATGCAGATGTGACTGATGTTGCAATAGAGTGGGCAGAGAAAAATGTTAATAGTAATCCA CAATTTTCTGAGTTGATTGAAATTAGAAAGGTTGAAAGCAATGAAAGTACTTTCTGTGTGGAAGAGTTGCATTCTGAAAAGCCAGTCCAGAGTAGAACCG AGATAAATTTGTGTGAGAGTATCAATACAGAGGTAGAACCTTTGCCTTCATTACCTCTTGATTCACACATCCTGGAGAATAAGAATTATCGTGGACCTAC CATACTTCTTGGCGTAGTAAGGGATGATGAGAAGTTTGACTTTTGCATGTGTAATCCACCTTTTTTTGAAAGTTTGGAGGAAGCAGGACTTAATCCTAAA ACTTCTTGTGGAGGCACTTCGAAAGAAATGGTTTGCCCTGGTGGCGAAAAGGCCTTCATTACTCGTATTATTGAAGACAGTACTGAACTGAAGCATCAAT TTCGGTGGTTCACTTCAATGATAGGGAGAAAGACAAATCTCAAGTACCTTACATCAAAACTTTGGGAGGTTGGTGTTACCATAGTTAAGACAACCGAATT TGTCCAAGGCAGGACATCCCGATGGGGCCTTGCTTGGTCTTTCTTGCCTCCTATACAGAAGTCATCAATTTCTTTACCTGAGAAGAAGAGTAACATTTCC TTTCTGGTCGAGGGAAGTAGCAGGGAAGGTTGAAGAACAACTAGCGGCAGCAAGAACTTCAATCAGAACCAATCGGAGTGCCGCAAATGAAGGCGGCGAT GAGGGCTATGTTCCTAGCAGAGCTGTGTATTGGAATCCACGCTTATTTTACAGGAGCTACTTGGAGATGAGAAAATATTGAAAGTGTATGTATATCCAGA TGGGGATCATCCAATAGCTCATGATGGACCATGCAAAGACATATACTCAATTGAAGGAAGGTTCCTCCATGAAATAGAACATGGTCGTGGCAGGTTTATG ACCAATGATCCTAGTCTTGCTCATGTTTACCTTTTGCCTTTCAGTGTAGCTTGGATGGTGAAATATCTGTATACACCACTCTCTTATGACCACTCTCCTT TAAGGCAATTTGTCTTTGATTATGTTAGAGTCATATCTACTAAGTACCCTTTCTGGAATAGAACTCATGGTGCTGACCACTTCACTTCATGCTTGCTTGT CATGATTGGATGGAAGGGCAACTAATAAGTCCAGAAGCTTATCTACTAATTTAGCTCAGGAAGAGAGGCAATATTCCTACCTTCTAGGATGATATTTTGG GGATATCAAGACACCTGTACTGGAGCTTTTCCCCCAAGAAGTTAATGCGATCTTCCATCCCAACATGGTGCCTTTAATGTTTTGGAAGCCATCAAGTCTT ACTTCTCTTTGTATGGCCTATCATGTACATTGAATCCCTCCTCTTTCACGGTGGATGTCCTGGCGTCCAAAGATTACTGTGATTCAATCTTGAAGAATGA ATTACCGATTATCAATAAATCCATCAATTGTCAACCTTCAGGAGAGACATCTAATGGATCAAGTTTGAATTCCTCCGCTGATAGATTAGGCCTCCGTATA TCGGTTTTTCAGCAAAGCCGTAGGACACTGTTGGTGAAAGGTTCATTACAAGATAGGAATAGCCCATTATCAGGAGCATTCTCAGTGATATTCCAAAAGC TGGAGGAAGCTTTGCGAAATAAATTTTATACAAAATTGGCCTGATGGTTTAGTTATTTGACTTATCACTTACAAGTTATAGGACTGAGTGATTGGATGAT ATGTTGTCGAATGGAGATAAGTTCATGAGTGCTATATAGTCGGGGCCACGGTTTGTAGAATACATAACTGAAATCGCACTTGACGTAGAATGGAAATAGA GCACAACAATCATTTCCAAAGACACTATTGCTCAACAACAATCAAGCCTTAATCTTGAGGCAGTGTTCCTCCTTGTAACATTTTTGGTAGATCATGTATA TTTATTTTTGTACCAAACCGCTTAGAACTATTCATTTGGTTTGAAAATTGTCCTAAGTGGGATCTGTATTTAAAAATACCAAACTGTCATTTTGTACATG GTACATGGTATCTGCTTATTTTTTACTCAGTATTTGCATCTATGGTGGCAAAAATAACATGTCCATTATTATCTCC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_74760; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_79772
| Blastp | U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase from Gallus with 41.13% of identity |
|---|---|
| Blastx | U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase from Danio with 34.96% of identity |
| Eggnog | Specifically methylates the adenine in position 1618 of 23S rRNA (By similarity)(COG3129) |
| Kegg | Link to kegg annotations (431184) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019460068.1) |
| Pfam | Protein of unknown function (DUF890) (PF05971.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |