| Id Trinity | FTRINITY_DN58171_c5_g1_i14 |
|---|---|
| Name Transcript | Ll_transcript_79345 |
| Sequence | TTTCATAGCATGAACTTGGAACTAAAATTTGTGATTCTGTTTTTACAATTTCTCTCTCCTATTTATGTTCATTTCCCATTTTTCCTTTTAATATTATTTT TTCTCTATCAGGTTCATCCATGAAAAAAATGTACCTTTGATCTAGATTGAAAAAAAATGTGTCCTTTATCAGAAAATTGAGCTTATGTGGGGCATTCTGA GCCAACCCAATTCATCAATTTGGTTTTTTTGATCCTTTTAACCTTTTCTATTGAGAATTGAAGAACCCAGCTTTGGTCAACGGAGGAAGGATTAGAGATT TGGGGAAATGGATCAGAAGGAGCCACAAGTAGAGGTTTCTTGGCTTCCAACAACCCCAGCTAAGCCCATTCTTATGAAACCGGTGCCGATCTGCGAGCCG GAGGTGCAGAATCAACAGCTGGGTTGTAAAGATGATAATGAAGCAGTTGCATGTTATGAATTCTCTGCTGGTGCAGTACCTGGGTCTACACTTGCAAACA GTGTCAGTGGAAATGGGAAAACATGTGTGCAAACAGCTTCTGATAATTTTTCGGGCTGGAGTAAACTCGGATTTTCTGAACTTTTGTTCCTGACTGAGGC AGGATCTGGAATGCTACCAGACAATCATAATGGATTGGAAAATCCATTTATTCCTTCATTGATGTCACAGTTCAATGGTGATGTTCAAGGCACATCACAC ACTGCTGGCTGTAGCAAGGAAATTTCTGAAGATATTCTTACACCAGCCAATGCCATCAGAGCAGAAAGCAAACAAATTGCATCACCGCATATCAATGTGG AAGAAAAGGGTCCTCGTGGGGAAGAGGAAAATATATCTGCTAAAACACTTGGGGATAATGGAACCTCACCAAACAAAGAACTCTCTGAGCCTGTGGTAGA ATCTGCTGCTGTTTCTACGCAATTGAAGGAGAATGACAACCCTGATTACGGAAGCAGCCATGATATTGATCTGACTAAAACGCCACAACAAAAACCAAAG AGGAGAAGAAAGCACCGCCCCAAGGTCATCATAGAAGGCAAACCCAAAAGAACACGGAAGCCAGCTACCCAAAAGCCAGCTCAAGCAAAAGAAACCCCAA CTGTCAAGAGGAAGTATGTTCGAAAGAAAGGATTGAACAACACATCTATTCCTCCAACAGAAATGATGGGAGAATTGACTGAAGAAATTAATCCAGAATC TGCTAAACAACCTTGTAGAAGGTCATTAAATTTTGATATAGGACCAATAGATGAAAGTTCTGCATGCAGAGAAAATGAAACTGCACATCTGGGCAAAGAA ACTGGCGTAGTTGAACAGCAAACAAATGTAGGCCTTGCCCATGATCTAAGTACAACTACATCTCCTTCAAAAGAAAACCCACCTGAGAAGAGGAAGTATG TGAGAAGGAAAAAAATGAGCAAAACTTCTGCTCCTACAATCGAAGTGACAGGAGAATTGCCTAAAGGGGTGATGGCAGAATCTACCAAAAATTCTTGTGG AAAGTCCTTAGACATTGGCATAGGAGCTACCGATCAAAGTTTGGCAGGCATAGAAAATGCAACTGTGCATCTGGGCAATGAAATTGATGTAGCCACACAG GAAACAAATGTAGGCCTTTCCTATGATTTGAAGACTTCCACTGAGAAGGCATCAAATAATTATATGCCATTATCTAAAGACACACAAGCCCCTGGGACAT CTTCTTCAAAAAGTACTCCCCCTGCGGCAGAGGTAAAAGTAGACACAACTACCAAGAGGAAGTATGTTAGAAGGAAAGGGCCAAATAAGTCTATCCCTCC AGCAGAAATGGCAGCAGCATTGACTGAACCAGTGGTGCTCGATTCTAACAATATGTCATGGAGAAGTTCTTCAGGCGGACAAAACTTAAGTGAGCATATT AGCATGGACAATAATTCTAAGAAGGAATTAGATAGCTCCATGTCATTGCCTGAAGACATACAAGCCCCAAGAACATGTCCTGCAAAAACCAATTCCTCTG TGGCAAAGTCAGAAGAAAAGGCAGCTAGCAAGAGGAAGTATTCGAGAAGGAAAAGATTGAGCAACTCTTCTACTCATCCAACTGAAATGACAACAAATTT GATTCAACCAACAATGCTGGAATCTACTGAAATAGAACAGAGAAGGTCCTTGTATTTTGACGCAGGAGCAAGAGATGAAAGTTCTGCATGCAGACAAAAT TTAAATGTGCATAATTGCAAGGAAAACAGTGCGGTGGCAGAGGGAACACATGCAGGCCTTACCTATGATCAAGGCACTTATATGAAGCAGGCATTATATA ATTTCATGTCATTACCTGAAGACATACAAGTCTCAAATACATCTTCAAAAAGCAACTCCCCTGGGGCAAAGCTGAATGCCAACTCTGTAGAAAACAGAAG CAGAAAAAATGGTCAGGGAATTGTTGAGGATGGACATGAAAACAGTGCAAAACTCCTACTAAAATCAGTGAGAGAATCAAATCCAAATGATTCCAATATC AGTAACAGTCAAATCTCAATGCGGTTACAAATGGTTGGTTCCAAGAGAAGTCATTGTGATACCAGTAGATTTGCAAACGCGAGCAGCATGAATGACATTG GGGCATACTATAATGGATTTCCATCATACCAGAATATGTTTAGCATTCAGTTTCCCAACCTTCAGAAGAGACGGAGAAGTGAAAACGGGAAAAGTTCTAA TGCTTATACTACATCTTCTGTGACTACCATCAAAGAAGCAGAACTGACATTCTCTCAAGAAGTTGCTCAGGTGCATCCTTATGCATCAAGTTCTAGCTGC TGGAATTTTTGTTCCGAATATAATGCAGCTAGAGTCCCAACCATAAGTGAAGCAACAGGAAGCGTTATTGATGATGATCAAGCATTCGAAGAGTTCAAAT TATCTTTGAGAAGAGCACAAATTTATGATTGTGTATCTCTAACCAGAATTAGAAACTTTGATAGTGAACCAAATTATTCTGGACATGAACTATGCTTTTC TGATAGACAAGCATTTGGGAATGCACAAGGACTACAGACATCCATTGATGCCTTAGTTACTGAGACAAGGGCATCACTCACAAAGAATAAAAATAAAAGT GTTGTTTCCAGGTCACCATATTCTACAATAAACGAAATGCAACAGTGTCAGAGTTTTGCATTGGGAAATTACCACCAGCCAATAGCTGTTGCTTCTGAAG TAAGGCCAATCATGCTATATGTTAATGCATTAGCAGAGAAACTTAGTCAACTAAACATAAACAAAGGAGCCAAAGACCTTGCCCTTGTCCCATATAAAAA AAAGAAAAAGAAAAGAAGTCTTGTCAATGGAGATGGCACCATTATTCCCTTTAATGGATCATTTAGTCCTATCAGAAAACAGCTTCCACGACCTAAAGTT GACATTGATGAGGAGACTGATAGAGTTTGGAAGCTTTTGATGTTGGATATTAATAGTCATGGCATTGATGGAACAGATGAAGATAAGGCCAAGTGGTGGG AAGACGAACGAAACATTTTCCGTGGGCGAGCAGATTCATTTATTGCAAGGATGCATCTTGTACAAGGAGACAGACGATTTACTCGATGGAAAGGATCAGT TCTGGATTCAGTGGTAGGAGTTTTCCTCACACAAAATGTATCAGACCATCTTTCCAGTTCTGCATTCATGTCCCTTGCTGCTCGATATCCGAAAAAGTTT AGCGAAACATACCATGGAGAAGGGACAGTGGTAGCCAACGAACCAGAAGTTCACATAGTAGAACCAGAAGAGAGTACAGAATGGGATAGCCAGATATTGG ACAAATCTGTTTATGACCACAGTTCTATGACAATAGACATTTCTGAGCATTCTGGAGAAAAAGCTGACAACAGTTCCAGCAGAACTACCAATGGTGCAAT TAGCATAACATATGAATCAAGCTGCAAACTGTCAGAATCATCTGAAAGAAATACAGGGAAACAGTATAGTCCAATTAGGAGTGGACCAATTAGTACCATG TCTGAGGAAGGGGAGGAAAAATCATGTTATGAGGGTGTTAGGAAAGAGTTAAATGACATAGTTTCATCCCAAGACTCTGTCATTTCATCTCAAATATCTG GCGATTCTTCAAATGATCAAAATCCTGAGAAGATAGGGTCATGCTCGGATAGCAACTCAGAAGTAGAAAACCTCTCAAGCACAGCAAAGCACACCAGTTT TTATAACAGTACTTCCTTTAGCAAGCTTGTCGAAATGGCAAGTTCATCCAAGTTATATGAAGTGAACAGTAAAAAATGTAACTCAACTGAGAACTTAAGA GATGCATTTGGCCTTGGCATGATGCACGACCACTCAGCAGAAACCTTGGAAAAATCAAATCTTATCGAAGGCTCCCTTGAAGCATCCATCACCACATCCC ATCCCATACAAAAAGACACCTCAAGGAATGAAATCAATGAGATAAGTTCTGCTCCAGTACAATTACAGAGCCGAGGACAAGCAAAGGATAAAAATGAAGA GATTAACTGGGATAACTTAAGAATACAAGCACAAGCTAAGGCAGGGAAAAGAGAAAAGACAAAAGATACTATGGATTCTTTGGACTGGGAAGCTGTTAGA TGTGCGGATGTCAATGAGATTGCCAATACAATAAAAGAACGTGGAATGAACAATAGACTCGCAGATCGCATTAAGAATTTCCTGAACCGACTGGTTGAAG AGCATGGAGACATTGACCTGGAGTGGTTGAGAGATGTTCCACCAGACCAAGCAAAAGAATACTTGCTCAGCGTAAAAGGATTGGGATTGAAGAGTGTGGA ATGTGTGCGGCTTTTAACACTGCACCATCTTGCCTTTCCGGTGGATACAAATGTTGGACGTATAGCAGTACGATTGGGATGGGTACCTATCCAGCCATTG CCTGAGTCATTACAGTTGCATCTCCTAGAACTGTACCCAATATTGGAGTCCATACAAAAATACCTCTGGCCTCGACTCTGCAAGCTGGATCAAAAAACAT TATATGAGTTACATTATCAGATGATAACATTTGGAAAGGTCTTCTGTACAAAAAGCAAGCCAAATTGTAATGCATGCCCAATGAGAGCAGAATGTAGACA CTTTGCTAGTGCATTTGCAAGTGCAAGGCTTGCTCTTCCAGGACCAGAGCAAAAGAGTATAGTTAGCACATCTGCAAATAATGTCAATGATCAGAACCCA CCTGTAATCTTCAATCAGTTGTACTTGCAACCCGCCGAGAACACAAACCAAGCAGAAGACATTCAACAAACAGAACTGAGCAGACAACTGTATTCAAAAC CTGAAATAAATAGTTGTCAACCAATTATTGAAGAGCCAACAACTCCAGATCCAGAATGCTCGCAACTACCACAAGATGATATTGAGGATGCATTCTATTA TGATGATTCATGTGAAATTCCCACAATCAAACTTAACATGGAAGAATTCACTACGAATCTACAAAATTATATGCAACAAAACATGGCACTACAAGAAGGT GAAATGTCAAAGGCCTTGGTTTCTTTGAATCCAGAGGCTGCTTCCATTCCTGTGCCCAAGCTAAAGAATGTGAGCCGATTAAGAACAGAGCATTGCGTTT ATGAACTCCCAGATACGCATCCTCTTCTGGAAGGGTGGGACACTCGAGAGCCCGATGATCCAGGAAAATACCTTCTTGCTATATGGACTCCAGGTGAGAC GGCAGATTCTATTCAGCCACCTGGAAGCAAATGCAACTCTCTGGAATGTGGCCAACTCTGCAACGAGAAGGAGTGTTTCTCATGCAACAGTTTCCGAGAA GCAAATTCACAAACAGTTAGAGGGACAATCTTGATACCATGTAGAACAGCGATGCGTGGAAGCTTTCCACTAAATGGGACCTATTTCCAAGTCAATGAGG TATTTGCCGACCATGACTCAAGTCTTGACCCAATTAGTGTTCCGCGAAGTTGGATCTGGAATCTTAATAGGAGAACGGTATATTTCGGAACCTCCATACC AACAATATTTAAAGGTTTATCCACACAGGATATTCAACAATGCTTTTGGAGAGGGTATGTCTGTGTGAGGGGGTTTGACAAGAAAACACGAGCACCCCGT CCTCTTATG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_74785; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_79345
| Blastp | Protein ROS1 from Arabidopsis with 47.73% of identity |
|---|---|
| Blastx | Protein ROS1 from Arabidopsis with 67.93% of identity |
| Eggnog | endonuclease III(COG0177) |
| Kegg | Link to kegg annotations (AT2G36490) |
| CantataDB | Link to cantataDB annotations (CNT0000689) |
| Mirbase | mtr-MIR2086 (MI0010539) |
| Ncbi protein | Link to NCBI protein (XP_019453313.1) |
| Pfam | Permuted single zf-CXXC unit (PF15629.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |