Ll_transcript_79333

• Id Trinity: FTRINITY_DN58171_c5_g1_i3
• Name Transcript: Ll_transcript_79333
• Sequence: GAATAACATTACTCTCGTCCAAAGTCATAGAAGTTAGCAACAACTAACCTATGGAAAATAAAATACAAATTCCATTTATCCTAAGATATCTTAAGATTCA TTCTACATCTTTCTCTGCCTATAAATGAAATTAACCTAGCTCAGAATCCATTCACAAACCTTATGAAAATCTTGTGCTTCTTCTCTCAAATCTGTTTGAA GAAGATTTGATATATCAGATCTCTAGCATTGACTACATGCAACAACCATTTCCATAAATTTCTCTTATTTTCTGTTTTAACTTTGGGTTTTGTTGGCAGC ATCAAAGAATTTCTAGTCACCGCATGAATCGGAGTTACTGAGAGTAATTACAAGCTTTGTGTGAGTCACCAGTTACTTTGGAAAGGTTCATCCATGAAAA AAATGTACCTTTGATCTAGATTGAAAAAAAATGTGTCCTTTATCAGAAAATTGAGCTTATGTGGGGCATTCTGAGCCAACCCAATTCATCAATTTGGTTT TTTTGATCCTTTTAACCTTTTCTATTGAGAATTGAAGAACCCAGCTTTGGTCAACGGAGGAAGGATTAGAGATTTGGGGAAATGGATCAGAAGGAGCCAC AAGTAGAGGTTTCTTGGCTTCCAACAACCCCAGCTAAGCCCATTCTTATGAAACCGGTGCCGATCTGCGAGCCGGAGGTGCAGAATCAACAGCTGGGTTG TAAAGATGATAATGAAGCAGTTGCATGTTATGAATTCTCTGCTGGTGCAGTACCTGGGTCTACACTTGCAAACAGTGTCAGTGGAAATGGGAAAACATGT GTGCAAACAGCTTCTGATAATTTTTCGGGCTGGAGTAAACTCGGATTTTCTGAACTTTTGTTCCTGACTGAGGCAGGATCTGGAATGCTACCAGACAATC ATAATGGATTGGAAAATCCATTTATTCCTTCATTGATGTCACAGTTCAATGGTGATGTTCAAGGCACATCACACACTGCTGGCTGTAGCAAGGAAATTTC TGAAGATATTCTTACACCAGCCAATGCCATCAGAGCAGAAAGCAAACAAATTGCATCACCGCATATCAATGTGGAAGAAAAGGGTCCTCGTGGGGAAGAG GAAAATATATCTGCTAAAACACTTGGGGATAATGGAACCTCACCAAACAAAGAACTCTCTGAGCCTGTGGTAGAATCTGCTGCTGTTTCTACGCAATTGA AGGAGAATGACAACCCTGATTACGGAAGCAGCCATGATATTGATCTGACTAAAACGCCACAACAAAAACCAAAGAGGAGAAGAAAGCACCGCCCCAAGGT CATCATAGAAGGCAAACCCAAAAGAACACGGAAGCCAGCTACCCAAAAGCCAGCTCAAGCAAAAGAAACCCCAACTGTCAAGAGGAAGTATGTTCGAAAG AAAGGATTGAACAACACATCTATTCCTCCAACAGAAATGATGGGAGAATTGACTGAAGAAATTAATCCAGAATCTGCTAAACAACCTTGTAGAAGGTCAT TAAATTTTGATATAGGACCAATAGATGAAAGTTCTGCATGCAGAGAAAATGAAACTGCACATCTGGGCAAAGAAACTGGCGTAGTTGAACAGCAAACAAA TGTAGGCCTTGCCCATGATCTAAGTACAACTACATCTCCTTCAAAAGAAAACCCACCTGAGAAGAGGAAGTATGTGAGAAGGAAAAAAATGAGCAAAACT TCTGCTCCTACAATCGAAGTGACAGGAGAATTGCCTAAAGGGGTGATGGCAGAATCTACCAAAAATTCTTGTGGAAAGTCCTTAGACATTGGCATAGGAG CTACCGATCAAAGTTTGGCAGGCATAGAAAATGCAACTGTGCATCTGGGCAATGAAATTGATGTAGCCACACAGGAAACAAATGTAGGCCTTTCCTATGA TTTGAAGACTTCCACTGAGAAGGCATCAAATAATTATATGCCATTATCTAAAGACACACAAGCCCCTGGGACATCTTCTTCAAAAAGTACTCCCCCTGCG GCAGAGGTAAAAGTAGACACAACTACCAAGAGGAAGTATGTTAGAAGGAAAGGGCCAAATAAGTCTATCCCTCCAGCAGAAATGGCAGCAGCATTGACTG AACCAGTGGTGCTCGATTCTAACAATATGTCATGGAGAAGTTCTTCAGGCGGACAAAACTTAAGTGAGCATATTAGCATGGACAATAATTCTAAGAAGGA ATTAGATAGCTCCATGTCATTGCCTGAAGACATACAAGCCCCAAGAACATGTCCTGCAAAAACCAATTCCTCTGTGGCAAAGTCAGAAGAAAAGGCAGCT AGCAAGAGGAAGTATTCGAGAAGGAAAAGATTGAGCAACTCTTCTACTCATCCAACTGAAATGACAACAAATTTGATTCAACCAACAATGCTGGAATCTA CTGAAATAGAACAGAGAAGGTCCTTGTATTTTGACGCAGGAGCAAGAGATGAAAGTTCTGCATGCAGACAAAATTTAAATGTGCATAATTGCAAGGAAAA CAGTGCGGTGGCAGAGGGAACACATGCAGGCCTTACCTATGATCAAGGCACTTATATGAAGCAGGCATTATATAATTTCATGTCATTACCTGAAGACATA CAAGTCTCAAATACATCTTCAAAAAGCAACTCCCCTGGGGCAAAGCTGAATGCCAACTCTGTAGAAAACAGAAGCAGAAAAAATGGTCAGGGAATTGTTG AGGATGGACATGAAAACAGTGCAAAACTCCTACTAAAATCAGTGAGAGAATCAAATCCAAATGATTCCAATATCAGTAACAGTCAAATCTCAATGCGGTT ACAAATGGTTGGTTCCAAGAGAAGTCATTGTGATACCAGTAGATTTGCAAACGCGAGCAGCATGAATGACATTGGGGCATACTATAATGGATTTCCATCA TACCAGAATATGTTTAGCATTCAGTTTCCCAACCTTCAGAAGAGACGGAGAAGTGAAAACGGGAAAAGTTCTAATGCTTATACTACATCTTCTGTGACTA CCATCAAAGAAGCAGAACTGACATTCTCTCAAGAAGTTGCTCAGGTGCATCCTTATGCATCAAGTTCTAGCTGCTGGAATTTTTGTTCCGAATATAATGC AGCTAGAGTCCCAACCATAAGTGAAGCAACAGGAAGCGTTATTGATGATGATCAAGCATTCGAAGAGTTCAAATTATCTTTGAGAAGAGCACAAATTTAT GATTGTGTATCTCTAACCAGAATTAGAAACTTTGATAGTGAACCAAATTATTCTGGACATGAACTATGCTTTTCTGATAGACAAGCATTTGGGAATGCAC AAGGACTACAGACATCCATTGATGCCTTAGTTACTGAGACAAGGGCATCACTCACAAAGAATAAAAATAAAAGTGTTGTTTCCAGGTCACCATATTCTAC AATAAACGAAATGCAACAGTGTCAGAGTTTTGCATTGGGAAATTACCACCAGCCAATAGCTGTTGCTTCTGAAGTAAGGCCAATCATGCTATATGTTAAT GCATTAGCAGAGAAACTTAGTCAACTAAACATAAACAAAGGAGCCAAAGACCTTGCCCTTGTCCCATATAAAAAAAAGAAAAAGAAAAGAAGTCTTGTCA ATGGAGATGGCACCATTATTCCCTTTAATGGATCATTTAGTCCTATCAGAAAACAGCTTCCACGACCTAAAGTTGACATTGATGAGGAGACTGATAGAGT TTGGAAGCTTTTGATGTTGGATATTAATAGTCATGGCATTGATGGAACAGATGAAGATAAGGCCAAGTGGTGGGAAGACGAACGAAACATTTTCCGTGGG CGAGCAGATTCATTTATTGCAAGGATGCATCTTGTACAAGGAGACAGACGATTTACTCGATGGAAAGGATCAGTTCTGGATTCAGTGGTAGGAGTTTTCC TCACACAAAATGTATCAGACCATCTTTCCAGTTCTGCATTCATGTCCCTTGCTGCTCGATATCCGAAAAAGTTTAGCGAAACATACCATGGAGAAGGGAC AGTGGTAGCCAACGAACCAGAAGTTCACATAGTAGAACCAGAAGAGAGTACAGAATGGGATAGCCAGATATTGGACAAATCTGTTTATGACCACAGTTCT ATGACAATAGACATTTCTGAGCATTCTGGAGAAAAAGCTGACAACAGTTCCAGCAGAACTACCAATGGTGCAATTAGCATAACATATGAATCAAGCTGCA AACTGTCAGAATCATCTGAAAGAAATACAGGGAAACAGTATAGTCCAATTAGGAGTGGACCAATTAGTACCATGTCTGAGGAAGGGGAGGAAAAATCATG TTATGAGGGTGTTAGGAAAGAGTTAAATGACATAGTTTCATCCCAAGACTCTGTCATTTCATCTCAAATATCTGGCGATTCTTCAAATGATCAAAATCCT GAGAAGATAGGGTCATGCTCGGATAGCAACTCAGAAGTAGAAAACCTCTCAAGCACAGCAAAGCACACCAGTTTTTATAACAGTACTTCCTTTAGCAAGC TTGTCGAAATGGCAAGTTCATCCAAGTTATATGAAGTGAACAGTAAAAAATGTAACTCAACTGAGAACTTAAGAGATGCATTTGGCCTTGGCATGATGCA CGACCACTCAGCAGAAACCTTGGAAAAATCAAATCTTATCGAAGGCTCCCTTGAAGCATCCATCACCACATCCCATCCCATACAAAAAGACACCTCAAGG AATGAAATCAATGAGATAAGTTCTGCTCCAGTACAATTACAGAGCCGAGGACAAGCAAAGGATAAAAATGAAGAGATTAACTGGGATAACTTAAGAATAC AAGCACAAGCTAAGGCAGGGAAAAGAGAAAAGACAAAAGATACTATGGATTCTTTGGACTGGGAAGCTGTTAGATGTGCGGATGTCAATGAGATTGCCAA TACAATAAAAGAACGTGGAATGAACAATAGACTCGCAGATCGCATTAAGAATTTCCTGAACCGACTGGTTGAAGAGCATGGAGACATTGACCTGGAGTGG TTGAGAGATGTTCCACCAGACCAAGCAAAAGAATACTTGCTCAGCGTAAAAGGATTGGGATTGAAGAGTGTGGAATGTGTGCGGCTTTTAACACTGCACC ATCTTGCCTTTCCGGTGGATACAAATGTTGGACGTATAGCAGTACGATTGGGATGGGTACCTATCCAGCCATTGCCTGAGTCATTACAGTTGCATCTCCT AGAACTGTACCCAATATTGGAGTCCATACAAAAATACCTCTGGCCTCGACTCTGCAAGCTGGATCAAAAAACATTATATGAGTTACATTATCAGATGATA ACATTTGGAAAGGTCTTCTGTACAAAAAGCAAGCCAAATTGTAATGCATGCCCAATGAGAGCAGAATGTAGACACTTTGCTAGTGCATTTGCAAGTGCAA GGCTTGCTCTTCCAGGACCAGAGCAAAAGAGTATAGTTAGCACATCTGCAAATAATGTCAATGATCAGAACCCACCTGTAATCTTCAATCAGTTGTACTT GCAACCCGCCGAGAACACAAACCAAGCAGAAGACATTCAACAAACAGAACTGAGCAGACAACTGTATTCAAAACCTGAAATAAATAGTTGTCAACCAATT ATTGAAGAGCCAACAACTCCAGATCCAGAATGCTCGCAACTACCACAAGATGATATTGAGGATGCATTCTATTATGATGATTCATGTGAAATTCCCACAA TCAAACTTAACATGGAAGAATTCACTACGAATCTACAAAATTATATGCAACAAAACATGGCACTACAAGAAGGTGAAATGTCAAAGGCCTTGGTTTCTTT GAATCCAGAGGCTGCTTCCATTCCTGTGCCCAAGCTAAAGAATGTGAGCCGATTAAGAACAGAGCATTGCGTTTATGAACTCCCAGATACGCATCCTCTT CTGGAAGGGTGGGACACTCGAGAGCCCGATGATCCAGGAAAATACCTTCTTGCTATATGGACTCCAGGTGAGACGGCAGATTCTATTCAGCCACCTGGAA GCAAATGCAACTCTCTGGAATGTGGCCAACTCTGCAACGAGAAGGAGTGTTTCTCATGCAACAGTTTCCGAGAAGCAAATTCACAAACAGTTAGAGGGAC AATCTTGATACCATGTAGAACAGCGATGCGTGGAAGCTTTCCACTAAATGGGACCTATTTCCAAGTCAATGAGGTATTTGCCGACCATGACTCAAGTCTT GACCCAATTAGTGTTCCGCGAAGTTGGATCTGGAATCTTAATAGGAGAACGGTATATTTCGGAACCTCCATACCAACAATATTTAAAGGTTTATCCACAC AGGATATTCAACAATGCTTTTGGAGAGGGTATGTCTGTGTGAGGGGGTTTGACAAGAAAACACGAGCACCCCGTCCTCTTATG
• Tissue: flowers
• Gene name: LI_gene_74785;
• Additional information: details;

Expression of Ll_transcript_79333

FPKM

• FPAB: 6.7
• FPNAB: 6.6
• LF1: 9.7
• LF2: 6.2
• LF3: 6.4
• LF4: 1.8
• UF1: 5.8
• UF2: 8.2
• UF3: 4.4
• UF4: 0.3

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_79333

• Blastp: Protein ROS1 from Arabidopsis with 47.73% of identity
• Blastx: Protein ROS1 from Arabidopsis with 67.93% of identity
• Eggnog: endonuclease III(COG0177)
• Kegg: Link to kegg annotations (AT2G36490)
• CantataDB: Link to cantataDB annotations (CNT0000689)
• Mirbase: mtr-MIR2086 (MI0010539)
• Ncbi protein: Link to NCBI protein (XP_019453313.1)
• Pfam: Permuted single zf-CXXC unit (PF15629.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;