| Id Trinity | FTRINITY_DN58178_c0_g4_i1 |
|---|---|
| Name Transcript | Ll_transcript_79477 |
| Sequence | AAAAAAAGTATATATTAAGGTGCATGTTTCTGGATTGTTCATGAAGCCTGCTAAGGACAGGGATATTTTCTTTGCTCTTCACCTTTACTCCACGGAATCA AAGGCAGAGAATACTAAATTATGTAGTGTAAACACAACTTGATATCCAAGTTGTGTAATATAATAATACATCACAATATATATATATATTTGATGGTATA TATGTGATTATATATCATGCATTTTATATATATATGTTATGGTTATACAAAGTTTGAGTTGTTTCAATTCGTCGACAAGAAAACTTAGTTTGACAATTTG ATTGGTTTTTTGGATATTTTTCCTCTGCTGCGGTTTTTCATAGCTTCTGGTTTGAAGGTTTGTATTTTTATTGTTGTTGGGAAAAATGGCTAATGAAGGA GATAAAGGCAATGATTTCTATGGTGTTCTGGGATTGAATAAGGAGTGCACTGAATCAGAGCTCAGAATTGCTTATAAGAAACTTGCACTGAAATGGCACC CAGATCGTTGTTCAGCTTCTGGGAATTCTAAGTTTGTTGAAGAAGCTAAGAAGAAATTCCAGGCAATCCAACAAGCCTATTCTGTTTTATCTGACGCAAA CAAGAGGTTAATGTACGACGTAGGAGTCTATGACAGTGATGATGACGAAAATGGTATGGGGGATTTCTTGAACGAAATGGTAACAATGATGAGCCAAACA AAACCAAATGAAAGTGGAGGGGAGAGCTTTGAGGAGTTGCAACAATTGTTTGAAGATATGTTTCAAGATGATATTAGATCAGATAGAAGAACCTCTCACA CTACTGCTACTTGTTGTACTTCATCTACATGCATGACTTTTAGTGAAACTTCTAGTTCAAATAAACGCAATTCCTCCGAGATGAATTTTGGGAGGGTGGA TGATTCTTTTGATTTCAATGGTGGCTACCCGAACTTCTGTTTTGGGACAGGTGAATCACATTCAAGATTTCAAGAAGCAAAAGGGAGGAATCCAAGAAGA AGGAGGTAAGAGTAGACATAGAAGTGGTAGAAAGCAAAAAATCTCACATGGTCATGATGTTTCTTCTGATGACTTCCCTAGCATTTCTGCTATGTAATGA ACTTGGTGGCATATTAGTTTGCATTTGGATATGTGAAATCCTTCATCTTTGACATGTTACAAAAGTATTAAGTACTCACTTCTAAGTCATTAAAAGTGGC ACTGTGGCATTTTCAATCTTTTGTAACCATGGTACAATCATGGCTAAGACTTTGAACTTAAATCAATTGATAACCCATCTTAGTCTCTTCAATTATGCAG ATTGCAGAGAATAATATTCTTGGTTTGCCTAAATTTGACAACAGAAAGAAAACATTATGTCATTTTTGAAGTTGGTCAATTCAGCATCTCATATGTTATA AGATATGTGATTTGCTTAGTCACAAATCTCACATTCCTTGAGATATTTTCTATGCATAATGAAAACAAAGTGGAACTATTAGAGGTTATAGTTGTATGAC AATGACTAATGAATCAAGCAAAATACAAATGGAAGGTGGTGGTTACTAATTTTATAAATGGAAGGGTCCTACATCACATGGGATATGGGACCCGGATAAG TACTGTTGTATGATCCACTTGCAAAAGCCTATGCCTACATTTTTGGTATGGAAAGTTGAGCATAGTACAATAAACTAGTCAACTTAAAATAATGCAGATA GTTCAAATACACACTTCTAGTCTACTTTTGGTTTTGAAAGCCATTTGGGACCAAACAAGTAGCCAAATATGTCCAATGCTGGTGTTATGATTTATGGGTC CCATACACCCAATAATTGGTTGGCTATTGTTGTGAAAGTTGTAAGTGTGACTTGTGCTTAAAGTAAAAATCCATGTTAGAGATCAATACATCTAATATCT TATGATGATAGATTTGCTTTGTGTTGTTATTCTTTATTTTTTGACTGATTTATTTGCATATATTCTTGGATATTAAGGTTCCACACACCTCTAGCAACAT GTTTTAGAAAATATGGGCTCATTCTCTTATTATTAGATTGGGCCTGTATTATTGTACTTGGTATTTAAAGTTGAACGATTAATATCCATTGTGCTAATTG AATGTTTTATTTTTCTTATTTAAACTAGATTATATTCATTTTGGTAAAACTTATATTTTAACAATTTTATAATATGCTTATCAAACTAATAAATCAGTTT TACAGAAAAAATATAAACATTGATAGTATATGAGTTTTATATGTCATCATTATATCATTTAATGTTCATGTTTTATTACCGACTCATCAAAAAATTAATC CAATATAAATATCCTATAACTAGGGCTTAGCTTGAATCCAGTGAGGATTGGATGGGTAGTGATTGTTTAGACCCATACAAAGGGTGAAGTGTTTTGTGGG ATCTTTCTATGATGTAGGTACATTTTCGAGTAAAGTTTAAAGTAGCTGATTCTCAAGCAACCAAAAATCAAGAGGGGAAACAAACAGAAATTAAAGATCC ATCATTTTATTGATTTATTTTATATATACACACTCTATGTTATGATGAGATTATGATGTTCAATTATAATGACAATTTACCAGCATACAATAAAAATTCC ATACCATATTAGTGCCTATGAAATGATACATGTGCCCTTTTGAAAATCATTCGGCTGAAGCAGATGGGTTTTTAAGTTTATATCATGCATGGTATTCCAA CTTTC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_74840; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_79477
| Blastp | Chaperone protein DnaJ from Thermotoga with 37.7% of identity |
|---|---|
| Blastx | Chaperone protein DnaJ from Thermotoga with 36.07% of identity |
| Eggnog | ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484) |
| Kegg | Link to kegg annotations (CTN_1726) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019455557.1) |
| Pfam | DnaJ domain (PF00226.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |