| Id Trinity | FTRINITY_DN58178_c0_g4_i11 |
|---|---|
| Name Transcript | Ll_transcript_79499 |
| Sequence | AAAAAAAGTATATATTAAGGTGCATGTTTCTGGATTGTTCATGAAGCCTGCTAAGGACAGGGATATTTTCTTTGCTCTTCACCTTTACTCCACGGAATCA AAGGCAGAGAATACTAAATTATGTAGTGTAAACACAACTTGATATCCAAGTTGTGTAATATAATAATACATCACAATATATATATATATTTGATGGTATA TATGTGATTATATATCATGCATTTTATATATATATGTTATGGTTATACAAAGTTTGAGTTGTTTCAATTCGTCGACAAGAAAACTTAGTTTGACAATTTG ATTGGTTTTTTGGATATTTTTCCTCTGCTGCGGTTTTTCATAGCTTCTGGTTTGAAGGTTTGTATTTTTATTGTTGTTGGGAAAAATGGCTAATGAAGGA GATAAAGGCAATGATTTCTATGGTGTTCTGGGATTGAATAAGGAGTGCACTGAATCAGAGCTCAGAATTGCTTATAAGAAACTTGCACTGAAATGGCACC CAGATCGTTGTTCAGCTTCTGGGAATTCTAAGTTTGTTGAAGAAGCTAAGAAGAAATTCCAGGCAATCCAACAAGCCTATTCTGTTTTATCTGACGCAAA CAAGAGGTTAATGTACGACGTAGGAGTCTATGACAGTGATGATGACGAAAATGTAAGTCTAGTTAACAACTTCACATGCCCTTATGCTTATCCTAAGTTT TATCCCTTCCCTTTCTCAATATCAGCACTACTAGTTATCCGTCGAGTGCTTCAAAAAACAAAAGAAATTTATCCCTTTAATTACAATAAAGTTATAATTT TGTCATTAAAAACAAGTGTAAAAACATGTATTTGTCTCTCCATTAATGGAAAGGATCCTTGTTCCCTCAACATGTATAACAATGTAATTAGTTGTTACAC AAAAAGAATGTTTTATTTTATCATCTTAGTTTTCAAATTCTTTTATTTATTTGTATTTCATCTAAAATTCATATCATCTATTAATTAGATTGGTGTATAA GGCCATTGCATTGTATTGCTTCTGTGATTATTAAGACATGATCTTGTTGTAAGGCCTTGAGTAGCTTTGATAATCCATTAATAAATTTTGATTATCGAAA AAAATAATGAAGTGAAATATTAATAAATGTTCATGCATTATGTTCTAACTAGCGTGTTGACAGGCACTCTTGTGCTAGCTAATCCACTTTTCTATTATTT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_74840; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_79499
| Blastp | Chaperone protein DnaJ from Beijerinckia with 50.72% of identity |
|---|---|
| Blastx | Chaperone protein DnaJ from Beijerinckia with 50.72% of identity |
| Eggnog | ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484) |
| Kegg | Link to kegg annotations (Bind_0129) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019455560.1) |
| Pfam | DnaJ domain (PF00226.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |